RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 NASPP49321 788 aaPredicted RBP20.53■□□□□ 0.88
PCDHA1-201ENST00000378133 KIAA1211Q6ZU35 1233 aa20.53■□□□□ 0.88
PCDHA1-201ENST00000378133 AEBP1Q8IUX7 1158 aa20.53■□□□□ 0.88
PCDHA1-201ENST00000378133 ANP32BQ92688 251 aaKnown RBP20.53■□□□□ 0.88
PCDHA1-201ENST00000378133 RBM42Q9BTD8 480 aaKnown RBP20.53■□□□□ 0.88
PCDHA1-201ENST00000378133 GOLGA6L22H0YM25 854 aa20.52■□□□□ 0.88
PCDHA1-201ENST00000378133 KRT24Q2M2I5 525 aa20.52■□□□□ 0.88
PCDHA1-201ENST00000378133 K7ELQ4 463 aaPredicted RBP20.52■□□□□ 0.87
PCDHA1-201ENST00000378133 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.52■□□□□ 0.87
PCDHA1-201ENST00000378133 PPP1R9BQ96SB3 815 aa20.52■□□□□ 0.87
PCDHA1-201ENST00000378133 PDCL3Q9H2J4 239 aa20.52■□□□□ 0.87
PCDHA1-201ENST00000378133 RIMS1Q86UR5 1692 aaKnown RBP20.51■□□□□ 0.87
PCDHA1-201ENST00000378133 SULT6B1Q6IMI4 303 aa20.51■□□□□ 0.87
PCDHA1-201ENST00000378133 ZSCAN30Q86W11 494 aa20.51■□□□□ 0.87
PCDHA1-201ENST00000378133 GSPT1P15170 499 aaKnown RBP20.5■□□□□ 0.87
PCDHA1-201ENST00000378133 SSFA2P28290 1259 aa20.5■□□□□ 0.87
PCDHA1-201ENST00000378133 NRXN3Q9Y4C0 1643 aa20.5■□□□□ 0.87
PCDHA1-201ENST00000378133 PRR36Q9H6K5 1346 aa20.49■□□□□ 0.87
PCDHA1-201ENST00000378133 EIF4A2Q14240 407 aaKnown RBP20.49■□□□□ 0.87
PCDHA1-201ENST00000378133 PLEKHM2Q8IWE5 1019 aa20.49■□□□□ 0.87
PCDHA1-201ENST00000378133 CDC45O75419 566 aa20.49■□□□□ 0.87
PCDHA1-201ENST00000378133 C16orf71Q8IYS4 520 aaPredicted RBP20.49■□□□□ 0.87
PCDHA1-201ENST00000378133 DCTPP1Q9H773 170 aa20.49■□□□□ 0.87
PCDHA1-201ENST00000378133 DDX49Q9Y6V7 483 aaKnown RBP20.49■□□□□ 0.87
PCDHA1-201ENST00000378133 MCM10Q7L590 875 aa20.48■□□□□ 0.87
PCDHA1-201ENST00000378133 ADAMTSL3P82987 1691 aa20.48■□□□□ 0.87
PCDHA1-201ENST00000378133 NUTM2FA1L443 756 aa20.47■□□□□ 0.87
PCDHA1-201ENST00000378133 MSNP26038 577 aaKnown RBP20.47■□□□□ 0.87
PCDHA1-201ENST00000378133 KLHL40Q2TBA0 621 aa20.47■□□□□ 0.87
PCDHA1-201ENST00000378133 INTS3Q68E01 1043 aaKnown RBP20.47■□□□□ 0.87
PCDHA1-201ENST00000378133 TMEM2Q9UHN6 1383 aa20.47■□□□□ 0.87
PCDHA1-201ENST00000378133 OFD1O75665 1012 aa20.46■□□□□ 0.87
PCDHA1-201ENST00000378133 GAS2L2Q8NHY3 880 aa20.46■□□□□ 0.87
PCDHA1-201ENST00000378133 FGD1P98174 961 aa20.46■□□□□ 0.87
PCDHA1-201ENST00000378133 MON2Q7Z3U7 1717 aa20.45■□□□□ 0.86
PCDHA1-201ENST00000378133 SIRT1Q96EB6 747 aa20.45■□□□□ 0.86
PCDHA1-201ENST00000378133 KNDC1Q76NI1 1749 aa20.45■□□□□ 0.86
PCDHA1-201ENST00000378133 KIF24Q5T7B8 1368 aa20.45■□□□□ 0.86
PCDHA1-201ENST00000378133 CHL1O00533 1208 aa20.45■□□□□ 0.86
PCDHA1-201ENST00000378133 BAG4O95429 457 aaKnown RBP20.45■□□□□ 0.86
PCDHA1-201ENST00000378133 CLEC17AQ6ZS10 378 aa20.45■□□□□ 0.86
PCDHA1-201ENST00000378133 HSP90AB2PQ58FF8 381 aa20.44■□□□□ 0.86
PCDHA1-201ENST00000378133 ANKRD44Q8N8A2 993 aa20.44■□□□□ 0.86
PCDHA1-201ENST00000378133 IBTKQ9P2D0 1353 aaPredicted RBP20.43■□□□□ 0.86
PCDHA1-201ENST00000378133 APBB1O00213 710 aa20.43■□□□□ 0.86
PCDHA1-201ENST00000378133 SOX12O15370 315 aa20.43■□□□□ 0.86
PCDHA1-201ENST00000378133 HDGFP51858 240 aaKnown RBP20.43■□□□□ 0.86
PCDHA1-201ENST00000378133 OTUD7AQ8TE49 926 aaPredicted RBP20.43■□□□□ 0.86
PCDHA1-201ENST00000378133 TTC21BQ7Z4L5 1316 aa20.43■□□□□ 0.86
PCDHA1-201ENST00000378133 TTC22Q5TAA0 569 aa20.43■□□□□ 0.86
PCDHA1-201ENST00000378133 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.43■□□□□ 0.86
PCDHA1-201ENST00000378133 ACEP12821 1306 aa20.42■□□□□ 0.86
PCDHA1-201ENST00000378133 CEP85Q6P2H3 762 aa20.41■□□□□ 0.86
PCDHA1-201ENST00000378133 SMARCA5O60264 1052 aaPredicted RBP20.41■□□□□ 0.86
PCDHA1-201ENST00000378133 RPAP2Q8IXW5 612 aaPredicted RBP20.41■□□□□ 0.86
PCDHA1-201ENST00000378133 MIS18AQ9NYP9 233 aa20.41■□□□□ 0.86
PCDHA1-201ENST00000378133 ROBO2Q9HCK4 1378 aa20.41■□□□□ 0.86
PCDHA1-201ENST00000378133 AKAP12Q02952 1782 aa20.41■□□□□ 0.86
PCDHA1-201ENST00000378133 HAP1P54257 671 aaPredicted RBP20.4■□□□□ 0.86
PCDHA1-201ENST00000378133 RGS12O14924 1447 aa20.4■□□□□ 0.86
PCDHA1-201ENST00000378133 TECPR2O15040 1411 aa20.4■□□□□ 0.86
PCDHA1-201ENST00000378133 NCLP19338 710 aaKnown RBP20.4■□□□□ 0.86
PCDHA1-201ENST00000378133 LTKP29376 864 aa20.4■□□□□ 0.86
PCDHA1-201ENST00000378133 MEIS3Q99687 375 aa20.4■□□□□ 0.86
PCDHA1-201ENST00000378133 ATP10DQ9P241 1426 aa20.4■□□□□ 0.86
PCDHA1-201ENST00000378133 ITSN1Q15811 1721 aa20.39■□□□□ 0.86
PCDHA1-201ENST00000378133 SLC4A2P04920 1241 aa20.39■□□□□ 0.85
PCDHA1-201ENST00000378133 MCTP1Q6DN14 999 aa20.39■□□□□ 0.85
PCDHA1-201ENST00000378133 ZNF445P59923 1031 aa20.39■□□□□ 0.85
PCDHA1-201ENST00000378133 MSH6P52701 1360 aa20.38■□□□□ 0.85
PCDHA1-201ENST00000378133 TERF1P54274 439 aa20.38■□□□□ 0.85
PCDHA1-201ENST00000378133 SLIT1O75093 1534 aa20.38■□□□□ 0.85
PCDHA1-201ENST00000378133 USP26Q9BXU7 913 aa20.38■□□□□ 0.85
PCDHA1-201ENST00000378133 RTL1A6NKG5 1358 aa20.37■□□□□ 0.85
PCDHA1-201ENST00000378133 CAVIN1Q6NZI2 390 aaKnown RBP20.37■□□□□ 0.85
PCDHA1-201ENST00000378133 ARHGAP23Q9P227 1491 aa20.37■□□□□ 0.85
PCDHA1-201ENST00000378133 SDSP20132 328 aa20.37■□□□□ 0.85
PCDHA1-201ENST00000378133 KIAA0232Q92628 1395 aa20.37■□□□□ 0.85
PCDHA1-201ENST00000378133 PTPRCP08575 1304 aa20.36■□□□□ 0.85
PCDHA1-201ENST00000378133 AK9Q5TCS8 1911 aa20.36■□□□□ 0.85
PCDHA1-201ENST00000378133 FOXO3O43524 673 aa20.36■□□□□ 0.85
PCDHA1-201ENST00000378133 RABEP1Q15276 862 aa20.36■□□□□ 0.85
PCDHA1-201ENST00000378133 HS1BP3Q53T59 392 aa20.36■□□□□ 0.85
PCDHA1-201ENST00000378133 R3HCC1Q9Y3T6 440 aaKnown RBP20.36■□□□□ 0.85
PCDHA1-201ENST00000378133 ZSCAN23Q3MJ62 389 aa20.36■□□□□ 0.85
PCDHA1-201ENST00000378133 CEP170BQ9Y4F5 1589 aaPredicted RBP20.36■□□□□ 0.85
PCDHA1-201ENST00000378133 NUCB2P80303 420 aa20.35■□□□□ 0.85
PCDHA1-201ENST00000378133 ADAMTS13Q76LX8 1427 aa20.35■□□□□ 0.85
PCDHA1-201ENST00000378133 PDE4CQ08493 712 aa20.35■□□□□ 0.85
PCDHA1-201ENST00000378133 PLEKHG3A1L390 1219 aa20.34■□□□□ 0.85
PCDHA1-201ENST00000378133 SLC4A10Q6U841 1118 aa20.34■□□□□ 0.85
PCDHA1-201ENST00000378133 NRKQ7Z2Y5 1582 aa20.34■□□□□ 0.85
PCDHA1-201ENST00000378133 PLEKHG1Q9ULL1 1385 aa20.34■□□□□ 0.85
PCDHA1-201ENST00000378133 NOL7Q9UMY1 257 aaKnown RBP20.34■□□□□ 0.85
PCDHA1-201ENST00000378133 OVOS2A0A0J9YW53 1432 aa20.34■□□□□ 0.85
PCDHA1-201ENST00000378133 OVOS2Q6IE36 1432 aa20.34■□□□□ 0.85
PCDHA1-201ENST00000378133 F6X3S4 739 aa20.33■□□□□ 0.85
PCDHA1-201ENST00000378133 G2E3Q7L622 706 aa20.33■□□□□ 0.85
PCDHA1-201ENST00000378133 LMBRD1Q9NUN5 540 aa20.33■□□□□ 0.85
PCDHA1-201ENST00000378133 RBSNQ9H1K0 784 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms