RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 CWC22Q9HCG8 908 aaKnown RBP21.5■■□□□ 1.03
CHTOP-203ENST00000368690 PNPLA6Q8IY17 1366 aa21.49■■□□□ 1.03
CHTOP-203ENST00000368690 FOXD4L1Q9NU39 408 aa21.48■■□□□ 1.03
CHTOP-203ENST00000368690 ZSCAN23Q3MJ62 389 aa21.47■■□□□ 1.03
CHTOP-203ENST00000368690 RBM42Q9BTD8 480 aaKnown RBP21.47■■□□□ 1.03
CHTOP-203ENST00000368690 LMBRD1Q9NUN5 540 aa21.47■■□□□ 1.03
CHTOP-203ENST00000368690 CABP1Q9NZU7 370 aa21.47■■□□□ 1.03
CHTOP-203ENST00000368690 KCNA6P17658 529 aa21.47■■□□□ 1.03
CHTOP-203ENST00000368690 MTERF4Q7Z6M4 381 aaKnown RBP21.47■■□□□ 1.03
CHTOP-203ENST00000368690 NPHP4O75161 1426 aaPredicted RBP21.46■■□□□ 1.03
CHTOP-203ENST00000368690 CSPP1Q1MSJ5 1256 aa21.46■■□□□ 1.03
CHTOP-203ENST00000368690 A0A1W2PP64 1363 aa21.46■■□□□ 1.03
CHTOP-203ENST00000368690 NUTM2FA1L443 756 aa21.46■■□□□ 1.03
CHTOP-203ENST00000368690 KIF24Q5T7B8 1368 aa21.45■■□□□ 1.03
CHTOP-203ENST00000368690 TERF2IPQ9NYB0 399 aa21.45■■□□□ 1.02
CHTOP-203ENST00000368690 ABCC4O15439 1325 aa21.45■■□□□ 1.02
CHTOP-203ENST00000368690 FCHSD2O94868 740 aa21.44■■□□□ 1.02
CHTOP-203ENST00000368690 MRPL50Q8N5N7 158 aaKnown RBP21.44■■□□□ 1.02
CHTOP-203ENST00000368690 DIAPH1O60610 1272 aaKnown RBP21.43■■□□□ 1.02
CHTOP-203ENST00000368690 HSPA2P54652 639 aa21.43■■□□□ 1.02
CHTOP-203ENST00000368690 MCTP1Q6DN14 999 aa21.43■■□□□ 1.02
CHTOP-203ENST00000368690 HDGFL2Q7Z4V5 671 aaPredicted RBP21.43■■□□□ 1.02
CHTOP-203ENST00000368690 AK9Q5TCS8 1911 aa21.43■■□□□ 1.02
CHTOP-203ENST00000368690 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.43■■□□□ 1.02
CHTOP-203ENST00000368690 CAVIN1Q6NZI2 390 aaKnown RBP21.42■■□□□ 1.02
CHTOP-203ENST00000368690 SIRT2Q8IXJ6 389 aa21.42■■□□□ 1.02
CHTOP-203ENST00000368690 NUDT16Q96DE0 195 aaKnown RBP21.42■■□□□ 1.02
CHTOP-203ENST00000368690 RBSNQ9H1K0 784 aa21.42■■□□□ 1.02
CHTOP-203ENST00000368690 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.41■■□□□ 1.02
CHTOP-203ENST00000368690 ZKSCAN5Q9Y2L8 839 aa21.41■■□□□ 1.02
CHTOP-203ENST00000368690 XRN1Q8IZH2 1706 aaKnown RBP21.41■■□□□ 1.02
CHTOP-203ENST00000368690 LRRC7Q96NW7 1537 aa21.4■■□□□ 1.02
CHTOP-203ENST00000368690 VAMP4O75379 141 aa21.4■■□□□ 1.02
CHTOP-203ENST00000368690 RBM33Q96EV2 1170 aaKnown RBP21.4■■□□□ 1.02
CHTOP-203ENST00000368690 USP26Q9BXU7 913 aa21.4■■□□□ 1.02
CHTOP-203ENST00000368690 DYNC1I1O14576 645 aa21.39■■□□□ 1.01
CHTOP-203ENST00000368690 GSPT1P15170 499 aaKnown RBP21.39■■□□□ 1.01
CHTOP-203ENST00000368690 PLEKHM2Q8IWE5 1019 aa21.39■■□□□ 1.01
CHTOP-203ENST00000368690 R3HCC1Q9Y3T6 440 aaKnown RBP21.38■■□□□ 1.01
CHTOP-203ENST00000368690 FYB1O15117 783 aa21.38■■□□□ 1.01
CHTOP-203ENST00000368690 TTC22Q5TAA0 569 aa21.38■■□□□ 1.01
CHTOP-203ENST00000368690 INTS3Q68E01 1043 aaKnown RBP21.38■■□□□ 1.01
CHTOP-203ENST00000368690 CCDC39Q9UFE4 941 aa21.38■■□□□ 1.01
CHTOP-203ENST00000368690 CCDC61Q9Y6R9 512 aa21.38■■□□□ 1.01
CHTOP-203ENST00000368690 PRIM1P49642 420 aaKnown RBP21.37■■□□□ 1.01
CHTOP-203ENST00000368690 GGNBP2Q9H3C7 697 aa21.37■■□□□ 1.01
CHTOP-203ENST00000368690 CD163L1Q9NR16 1453 aa21.37■■□□□ 1.01
CHTOP-203ENST00000368690 LRSAM1Q6UWE0 723 aa21.37■■□□□ 1.01
CHTOP-203ENST00000368690 CHD2O14647 1828 aaKnown RBP21.37■■□□□ 1.01
CHTOP-203ENST00000368690 KIF20BQ96Q89 1820 aa21.36■■□□□ 1.01
CHTOP-203ENST00000368690 ST18O60284 1047 aa21.36■■□□□ 1.01
CHTOP-203ENST00000368690 API5Q9BZZ5 524 aaKnown RBP21.36■■□□□ 1.01
CHTOP-203ENST00000368690 DCTPP1Q9H773 170 aa21.36■■□□□ 1.01
CHTOP-203ENST00000368690 NCLP19338 710 aaKnown RBP21.36■■□□□ 1.01
CHTOP-203ENST00000368690 IFT57Q9NWB7 429 aa21.36■■□□□ 1.01
CHTOP-203ENST00000368690 PRR36Q9H6K5 1346 aa21.35■■□□□ 1.01
CHTOP-203ENST00000368690 GNAI1P63096 354 aa21.35■■□□□ 1.01
CHTOP-203ENST00000368690 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.35■■□□□ 1.01
CHTOP-203ENST00000368690 C14orf37Q86TY3 774 aa21.34■■□□□ 1.01
CHTOP-203ENST00000368690 GPT2Q8TD30 523 aa21.34■■□□□ 1.01
CHTOP-203ENST00000368690 C1orf115Q9H7X2 142 aa21.34■■□□□ 1.01
CHTOP-203ENST00000368690 ATP7BP35670 1465 aa21.34■■□□□ 1.01
CHTOP-203ENST00000368690 UQCRHLA0A096LP55 91 aa21.34■■□□□ 1.01
CHTOP-203ENST00000368690 UQCRHP07919 91 aa21.34■■□□□ 1.01
CHTOP-203ENST00000368690 MBD3O95983 291 aa21.33■■□□□ 1.01
CHTOP-203ENST00000368690 ZNF853P0CG23 659 aa21.33■■□□□ 1.01
CHTOP-203ENST00000368690 NFE2L2Q16236 605 aa21.33■■□□□ 1.01
CHTOP-203ENST00000368690 SASS6Q6UVJ0 657 aa21.33■■□□□ 1.01
CHTOP-203ENST00000368690 CASC1Q6TDU7 716 aa21.33■■□□□ 1
CHTOP-203ENST00000368690 RBM10P98175 930 aaKnown RBP21.32■■□□□ 1
CHTOP-203ENST00000368690 PRPF40AO75400 957 aaKnown RBP21.31■■□□□ 1
CHTOP-203ENST00000368690 XPCQ01831 940 aaPredicted RBP21.31■■□□□ 1
CHTOP-203ENST00000368690 FAM13BQ9NYF5 915 aa21.31■■□□□ 1
CHTOP-203ENST00000368690 SMAP1Q8IYB5 467 aaPredicted RBP21.31■■□□□ 1
CHTOP-203ENST00000368690 PRDM4Q9UKN5 801 aa21.31■■□□□ 1
CHTOP-203ENST00000368690 ZDHHC9Q9Y397 364 aa21.3■■□□□ 1
CHTOP-203ENST00000368690 REC8O95072 547 aa21.3■■□□□ 1
CHTOP-203ENST00000368690 PRKAR2BP31323 418 aa21.3■■□□□ 1
CHTOP-203ENST00000368690 PKP1Q13835 747 aa21.3■■□□□ 1
CHTOP-203ENST00000368690 LMTK3Q96Q04 1460 aa21.29■■□□□ 1
CHTOP-203ENST00000368690 TMEM63CQ9P1W3 806 aa21.29■■□□□ 1
CHTOP-203ENST00000368690 TSPYL6Q8N831 410 aa21.27■■□□□ 1
CHTOP-203ENST00000368690 ANKRD44Q8N8A2 993 aa21.27■■□□□ 1
CHTOP-203ENST00000368690 TWISTNBQ3B726 338 aaPredicted RBP21.26■□□□□ 0.99
CHTOP-203ENST00000368690 RPAP2Q8IXW5 612 aaPredicted RBP21.26■□□□□ 0.99
CHTOP-203ENST00000368690 ITSN1Q15811 1721 aa21.26■□□□□ 0.99
CHTOP-203ENST00000368690 ACEP12821 1306 aa21.26■□□□□ 0.99
CHTOP-203ENST00000368690 CPSF1Q10570 1443 aaKnown RBP21.26■□□□□ 0.99
CHTOP-203ENST00000368690 MCM2P49736 904 aa21.26■□□□□ 0.99
CHTOP-203ENST00000368690 LMOD3Q0VAK6 560 aa21.26■□□□□ 0.99
CHTOP-203ENST00000368690 PROSER2Q86WR7 435 aaPredicted RBP21.26■□□□□ 0.99
CHTOP-203ENST00000368690 ZGPATQ8N5A5 531 aaKnown RBP21.26■□□□□ 0.99
CHTOP-203ENST00000368690 MBIPQ9NS73 344 aa21.26■□□□□ 0.99
CHTOP-203ENST00000368690 RBM27Q9P2N5 1060 aaKnown RBP21.26■□□□□ 0.99
CHTOP-203ENST00000368690 NALCNQ8IZF0 1738 aa21.25■□□□□ 0.99
CHTOP-203ENST00000368690 ATP10DQ9P241 1426 aa21.25■□□□□ 0.99
CHTOP-203ENST00000368690 RGPD8O14715 1765 aaPredicted RBP21.24■□□□□ 0.99
CHTOP-203ENST00000368690 SYCE3A1L190 88 aa21.24■□□□□ 0.99
CHTOP-203ENST00000368690 SDSP20132 328 aa21.24■□□□□ 0.99
CHTOP-203ENST00000368690 NGDNQ8NEJ9 315 aaKnown RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms