RNA–Protein interactions for RNA: ENST00000350199.8

RNF38-202, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 5,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-202ENST00000350199 MAP4K4O95819 1239 aaPredicted RBP23.44■■□□□ 1.34
RNF38-202ENST00000350199 TRDNQ13061 729 aa23.44■■□□□ 1.34
RNF38-202ENST00000350199 HIP1O00291 1037 aa23.44■■□□□ 1.34
RNF38-202ENST00000350199 SMARCA5O60264 1052 aaPredicted RBP23.43■■□□□ 1.34
RNF38-202ENST00000350199 PLXNC1O60486 1568 aa23.43■■□□□ 1.34
RNF38-202ENST00000350199 SBNO2Q9Y2G9 1366 aa23.43■■□□□ 1.34
RNF38-202ENST00000350199 MCTP1Q6DN14 999 aa23.43■■□□□ 1.34
RNF38-202ENST00000350199 TULP1O00294 542 aaPredicted RBP23.43■■□□□ 1.34
RNF38-202ENST00000350199 ARHGAP45Q92619 1136 aa23.43■■□□□ 1.34
RNF38-202ENST00000350199 PTCD1O75127 700 aaKnown RBP23.42■■□□□ 1.34
RNF38-202ENST00000350199 AACSQ86V21 672 aa23.42■■□□□ 1.34
RNF38-202ENST00000350199 C8orf58Q8NAV2 365 aa23.42■■□□□ 1.34
RNF38-202ENST00000350199 CPLX2Q6PUV4 134 aaKnown RBP23.42■■□□□ 1.34
RNF38-202ENST00000350199 SYNE3Q6ZMZ3 975 aa23.42■■□□□ 1.34
RNF38-202ENST00000350199 TMEM2Q9UHN6 1383 aa23.42■■□□□ 1.34
RNF38-202ENST00000350199 VPS37CA5D8V6 355 aaPredicted RBP23.42■■□□□ 1.34
RNF38-202ENST00000350199 DBF4Q9UBU7 674 aaPredicted RBP23.42■■□□□ 1.34
RNF38-202ENST00000350199 EDC4Q6P2E9 1401 aaKnown RBP23.42■■□□□ 1.34
RNF38-202ENST00000350199 DNAAF4Q8WXU2 420 aa23.42■■□□□ 1.34
RNF38-202ENST00000350199 RSPH6AQ9H0K4 717 aa23.42■■□□□ 1.34
RNF38-202ENST00000350199 PCDHB15Q9Y5E8 787 aa23.41■■□□□ 1.34
RNF38-202ENST00000350199 PSMA5P28066 241 aa23.41■■□□□ 1.34
RNF38-202ENST00000350199 HECW2Q9P2P5 1572 aa23.4■■□□□ 1.34
RNF38-202ENST00000350199 CPLX1O14810 134 aa23.4■■□□□ 1.34
RNF38-202ENST00000350199 MYOM2P54296 1465 aa23.4■■□□□ 1.34
RNF38-202ENST00000350199 CHRNA2Q15822 529 aa23.4■■□□□ 1.34
RNF38-202ENST00000350199 LARP1Q6PKG0 1096 aaKnown RBP23.4■■□□□ 1.34
RNF38-202ENST00000350199 AEBP2Q6ZN18 517 aaPredicted RBP23.4■■□□□ 1.34
RNF38-202ENST00000350199 MAGI2Q86UL8 1455 aa23.4■■□□□ 1.34
RNF38-202ENST00000350199 PIP4K2BP78356 416 aa23.39■■□□□ 1.34
RNF38-202ENST00000350199 MTHFSDQ2M296 383 aaKnown RBP23.39■■□□□ 1.34
RNF38-202ENST00000350199 LRRFIP2Q9Y608 721 aaKnown RBP23.39■■□□□ 1.34
RNF38-202ENST00000350199 NUTM1Q86Y26 1132 aa23.39■■□□□ 1.33
RNF38-202ENST00000350199 MCM2P49736 904 aa23.39■■□□□ 1.33
RNF38-202ENST00000350199 MAP3K19Q56UN5 1328 aa23.39■■□□□ 1.33
RNF38-202ENST00000350199 KIAA2012Q0VF49 1180 aa23.39■■□□□ 1.33
RNF38-202ENST00000350199 TNNQ9UQP3 1299 aa23.39■■□□□ 1.33
RNF38-202ENST00000350199 ARAP3Q8WWN8 1544 aa23.39■■□□□ 1.33
RNF38-202ENST00000350199 KDM5AP29375 1690 aaKnown RBP23.38■■□□□ 1.33
RNF38-202ENST00000350199 PRDM15P57071 1507 aaPredicted RBP23.38■■□□□ 1.33
RNF38-202ENST00000350199 KIF1BPQ96EK5 621 aa23.38■■□□□ 1.33
RNF38-202ENST00000350199 MRPL50Q8N5N7 158 aaKnown RBP23.37■■□□□ 1.33
RNF38-202ENST00000350199 CNNM1Q9NRU3 951 aa23.37■■□□□ 1.33
RNF38-202ENST00000350199 MX1P20591 662 aa23.37■■□□□ 1.33
RNF38-202ENST00000350199 MSH6P52701 1360 aa23.37■■□□□ 1.33
RNF38-202ENST00000350199 IFNL2Q8IZJ0 200 aa23.37■■□□□ 1.33
RNF38-202ENST00000350199 CCDC34Q96HJ3 373 aa23.37■■□□□ 1.33
RNF38-202ENST00000350199 BLMP54132 1417 aaPredicted RBP23.37■■□□□ 1.33
RNF38-202ENST00000350199 GLIPR1L2Q4G1C9 344 aa23.37■■□□□ 1.33
RNF38-202ENST00000350199 RALYLQ86SE5 291 aaKnown RBP23.37■■□□□ 1.33
RNF38-202ENST00000350199 ZMYM4Q5VZL5 1548 aa23.36■■□□□ 1.33
RNF38-202ENST00000350199 EYA1Q99502 592 aa23.36■■□□□ 1.33
RNF38-202ENST00000350199 HYPKQ9NX55 129 aa23.36■■□□□ 1.33
RNF38-202ENST00000350199 AKAP17AQ02040 695 aaKnown RBP23.36■■□□□ 1.33
RNF38-202ENST00000350199 CCDC57Q2TAC2 916 aa23.36■■□□□ 1.33
RNF38-202ENST00000350199 TMOD3Q9NYL9 352 aa23.36■■□□□ 1.33
RNF38-202ENST00000350199 CHAF1AQ13111 956 aaPredicted RBP23.36■■□□□ 1.33
RNF38-202ENST00000350199 IQGAP3Q86VI3 1631 aa23.36■■□□□ 1.33
RNF38-202ENST00000350199 INSRP06213 1382 aa23.36■■□□□ 1.33
RNF38-202ENST00000350199 RLBP1P12271 317 aa23.36■■□□□ 1.33
RNF38-202ENST00000350199 TSPYL6Q8N831 410 aa23.36■■□□□ 1.33
RNF38-202ENST00000350199 C19orf44Q9H6X5 657 aa23.35■■□□□ 1.33
RNF38-202ENST00000350199 ERVK-7P63135 1459 aa23.35■■□□□ 1.33
RNF38-202ENST00000350199 LTKP29376 864 aa23.35■■□□□ 1.33
RNF38-202ENST00000350199 HDAC1Q13547 482 aaPredicted RBP23.35■■□□□ 1.33
RNF38-202ENST00000350199 CCDC158Q5M9N0 1113 aa23.35■■□□□ 1.33
RNF38-202ENST00000350199 NOL10Q9BSC4 688 aaKnown RBP23.35■■□□□ 1.33
RNF38-202ENST00000350199 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.35■■□□□ 1.33
RNF38-202ENST00000350199 K7ELQ4 463 aaPredicted RBP23.35■■□□□ 1.33
RNF38-202ENST00000350199 RAB11FIP3O75154 756 aa23.35■■□□□ 1.33
RNF38-202ENST00000350199 MYD88Q99836 296 aa23.35■■□□□ 1.33
RNF38-202ENST00000350199 NPHP3Q7Z494 1330 aa23.35■■□□□ 1.33
RNF38-202ENST00000350199 VAMP4O75379 141 aa23.35■■□□□ 1.33
RNF38-202ENST00000350199 LRRIQ1Q96JM4 1722 aa23.34■■□□□ 1.33
RNF38-202ENST00000350199 IL13P35225 146 aa23.34■■□□□ 1.33
RNF38-202ENST00000350199 SHROOM2Q13796 1616 aa23.34■■□□□ 1.33
RNF38-202ENST00000350199 STARD3NLO95772 234 aa23.34■■□□□ 1.33
RNF38-202ENST00000350199 PIK3R4Q99570 1358 aa23.33■■□□□ 1.33
RNF38-202ENST00000350199 FMNL2Q96PY5 1086 aa23.33■■□□□ 1.33
RNF38-202ENST00000350199 TBC1D2BQ9UPU7 963 aa23.33■■□□□ 1.33
RNF38-202ENST00000350199 DMRT2Q9Y5R5 561 aa23.33■■□□□ 1.33
RNF38-202ENST00000350199 TTC39AQ5SRH9 613 aa23.33■■□□□ 1.32
RNF38-202ENST00000350199 TPM4P67936 248 aa23.33■■□□□ 1.32
RNF38-202ENST00000350199 NFXL1Q6ZNB6 911 aa23.33■■□□□ 1.32
RNF38-202ENST00000350199 LRRC59Q96AG4 307 aaKnown RBP23.32■■□□□ 1.32
RNF38-202ENST00000350199 TET3O43151 1660 aa23.32■■□□□ 1.32
RNF38-202ENST00000350199 PI4KAP2A4QPH2 592 aa23.32■■□□□ 1.32
RNF38-202ENST00000350199 CWC27Q6UX04 472 aaKnown RBP23.32■■□□□ 1.32
RNF38-202ENST00000350199 PI4KAP1Q8N8J0 262 aa23.32■■□□□ 1.32
RNF38-202ENST00000350199 HOXC9P31274 260 aa23.32■■□□□ 1.32
RNF38-202ENST00000350199 AMOTL1Q8IY63 956 aa23.31■■□□□ 1.32
RNF38-202ENST00000350199 ANXA1P04083 346 aa23.31■■□□□ 1.32
RNF38-202ENST00000350199 TRIM29Q14134 588 aa23.31■■□□□ 1.32
RNF38-202ENST00000350199 CROCC2H7BZ55 1655 aa23.3■■□□□ 1.32
RNF38-202ENST00000350199 GCP02774 474 aa23.3■■□□□ 1.32
RNF38-202ENST00000350199 MAP3K2Q9Y2U5 619 aa23.3■■□□□ 1.32
RNF38-202ENST00000350199 CDC42BPBQ9Y5S2 1711 aa23.3■■□□□ 1.32
RNF38-202ENST00000350199 RASSF8Q8NHQ8 419 aa23.3■■□□□ 1.32
RNF38-202ENST00000350199 KRT24Q2M2I5 525 aa23.3■■□□□ 1.32
RNF38-202ENST00000350199 SIRT1Q96EB6 747 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms