RNA–Protein interactions for RNA: ENST00000340650.5

NHLRC1-201, Transcript of NHL repeat containing E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 BASIC

Gene NHLRC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1-201ENST00000340650 IL16Q14005 1332 aa24.66■■□□□ 1.54
NHLRC1-201ENST00000340650 FAM83GA6ND36 823 aa24.66■■□□□ 1.54
NHLRC1-201ENST00000340650 NFAT5O94916 1531 aa24.65■■□□□ 1.54
NHLRC1-201ENST00000340650 FSD2A1L4K1 749 aa24.65■■□□□ 1.54
NHLRC1-201ENST00000340650 EXOSC9Q06265 439 aaKnown RBP24.65■■□□□ 1.54
NHLRC1-201ENST00000340650 CT47B1P0C2W7 299 aaPredicted RBP24.64■■□□□ 1.54
NHLRC1-201ENST00000340650 MCM4P33991 863 aa24.64■■□□□ 1.54
NHLRC1-201ENST00000340650 KCNH5Q8NCM2 988 aa24.64■■□□□ 1.54
NHLRC1-201ENST00000340650 KIF24Q5T7B8 1368 aa24.64■■□□□ 1.53
NHLRC1-201ENST00000340650 EIF5BO60841 1220 aaKnown RBP24.63■■□□□ 1.53
NHLRC1-201ENST00000340650 GCP02774 474 aa24.63■■□□□ 1.53
NHLRC1-201ENST00000340650 DCTN1Q14203 1278 aa24.63■■□□□ 1.53
NHLRC1-201ENST00000340650 ZKSCAN2Q63HK3 967 aa24.63■■□□□ 1.53
NHLRC1-201ENST00000340650 RRAGDQ9NQL2 400 aaPredicted RBP24.63■■□□□ 1.53
NHLRC1-201ENST00000340650 TRPM3Q9HCF6 1732 aaPredicted RBP24.63■■□□□ 1.53
NHLRC1-201ENST00000340650 XIRP1Q702N8 1843 aaKnown RBP24.63■■□□□ 1.53
NHLRC1-201ENST00000340650 IGSF1Q8N6C5 1336 aa24.63■■□□□ 1.53
NHLRC1-201ENST00000340650 UBE2Q2Q8WVN8 375 aa24.62■■□□□ 1.53
NHLRC1-201ENST00000340650 LTN1O94822 1766 aa24.62■■□□□ 1.53
NHLRC1-201ENST00000340650 DZIP1LQ8IYY4 767 aaKnown RBP24.61■■□□□ 1.53
NHLRC1-201ENST00000340650 IP6K1Q92551 441 aa24.61■■□□□ 1.53
NHLRC1-201ENST00000340650 C22orf23Q9BZE7 217 aa24.61■■□□□ 1.53
NHLRC1-201ENST00000340650 CHMP5Q9NZZ3 219 aa24.61■■□□□ 1.53
NHLRC1-201ENST00000340650 RTL1A6NKG5 1358 aa24.6■■□□□ 1.53
NHLRC1-201ENST00000340650 DLG5Q8TDM6 1919 aa24.6■■□□□ 1.53
NHLRC1-201ENST00000340650 GOLGA6L3A6NEY3 463 aa24.6■■□□□ 1.53
NHLRC1-201ENST00000340650 LMOD3Q0VAK6 560 aa24.59■■□□□ 1.53
NHLRC1-201ENST00000340650 HDAC1Q13547 482 aaPredicted RBP24.59■■□□□ 1.53
NHLRC1-201ENST00000340650 KDRP35968 1356 aa24.59■■□□□ 1.53
NHLRC1-201ENST00000340650 XRCC6P12956 609 aaKnown RBP eCLIP24.59■■□□□ 1.53
NHLRC1-201ENST00000340650 USHBP1Q8N6Y0 703 aa24.58■■□□□ 1.53
NHLRC1-201ENST00000340650 CALD1Q05682 793 aaKnown RBP24.57■■□□□ 1.52
NHLRC1-201ENST00000340650 FTSJ3Q8IY81 847 aaKnown RBP24.57■■□□□ 1.52
NHLRC1-201ENST00000340650 NPHP3Q7Z494 1330 aa24.57■■□□□ 1.52
NHLRC1-201ENST00000340650 SLIT3O75094 1523 aa24.56■■□□□ 1.52
NHLRC1-201ENST00000340650 MTHFSDQ2M296 383 aaKnown RBP24.56■■□□□ 1.52
NHLRC1-201ENST00000340650 MCM10Q7L590 875 aa24.56■■□□□ 1.52
NHLRC1-201ENST00000340650 ARHGEF25Q86VW2 580 aa24.55■■□□□ 1.52
NHLRC1-201ENST00000340650 BRINP3Q76B58 766 aa24.55■■□□□ 1.52
NHLRC1-201ENST00000340650 IFT57Q9NWB7 429 aa24.54■■□□□ 1.52
NHLRC1-201ENST00000340650 GNAI1P63096 354 aa24.54■■□□□ 1.52
NHLRC1-201ENST00000340650 MBIPQ9NS73 344 aa24.54■■□□□ 1.52
NHLRC1-201ENST00000340650 MFAP1P55081 439 aaKnown RBP24.53■■□□□ 1.52
NHLRC1-201ENST00000340650 ZC3H6P61129 1189 aaKnown RBP24.53■■□□□ 1.52
NHLRC1-201ENST00000340650 ALS2Q96Q42 1657 aa24.53■■□□□ 1.52
NHLRC1-201ENST00000340650 SPRYD3Q8NCJ5 442 aa24.53■■□□□ 1.52
NHLRC1-201ENST00000340650 DDX19BQ9UMR2 479 aa24.53■■□□□ 1.52
NHLRC1-201ENST00000340650 ZNF853P0CG23 659 aa24.52■■□□□ 1.52
NHLRC1-201ENST00000340650 NBPF6Q5VWK0 638 aa24.52■■□□□ 1.52
NHLRC1-201ENST00000340650 SMC5Q8IY18 1101 aa24.52■■□□□ 1.52
NHLRC1-201ENST00000340650 NBPF4Q96M43 638 aa24.52■■□□□ 1.52
NHLRC1-201ENST00000340650 SLAIN2Q9P270 581 aa24.52■■□□□ 1.52
NHLRC1-201ENST00000340650 CABLES1Q8TDN4 633 aa24.51■■□□□ 1.51
NHLRC1-201ENST00000340650 LRRC59Q96AG4 307 aaKnown RBP24.51■■□□□ 1.51
NHLRC1-201ENST00000340650 CFAP44Q96MT7 982 aa24.51■■□□□ 1.51
NHLRC1-201ENST00000340650 SMC4Q9NTJ3 1288 aa24.51■■□□□ 1.51
NHLRC1-201ENST00000340650 TRAK2O60296 914 aa24.51■■□□□ 1.51
NHLRC1-201ENST00000340650 TRIM27P14373 513 aa24.51■■□□□ 1.51
NHLRC1-201ENST00000340650 SSH1Q8WYL5 1049 aa24.51■■□□□ 1.51
NHLRC1-201ENST00000340650 MED1Q15648 1581 aaPredicted RBP24.51■■□□□ 1.51
NHLRC1-201ENST00000340650 AXIN2Q9Y2T1 843 aa24.5■■□□□ 1.51
NHLRC1-201ENST00000340650 PXDNQ92626 1479 aa24.49■■□□□ 1.51
NHLRC1-201ENST00000340650 TNS3Q68CZ2 1445 aa24.49■■□□□ 1.51
NHLRC1-201ENST00000340650 ELL2O00472 640 aaPredicted RBP24.49■■□□□ 1.51
NHLRC1-201ENST00000340650 ATF7IPQ6VMQ6 1270 aa24.48■■□□□ 1.51
NHLRC1-201ENST00000340650 HSCBQ8IWL3 235 aa24.48■■□□□ 1.51
NHLRC1-201ENST00000340650 TSPYL6Q8N831 410 aa24.48■■□□□ 1.51
NHLRC1-201ENST00000340650 DDIT3P35638 169 aa24.47■■□□□ 1.51
NHLRC1-201ENST00000340650 GAS2L2Q8NHY3 880 aa24.47■■□□□ 1.51
NHLRC1-201ENST00000340650 DDX11L8A8MPP1 907 aa24.47■■□□□ 1.51
NHLRC1-201ENST00000340650 MRE11P49959 708 aa24.47■■□□□ 1.51
NHLRC1-201ENST00000340650 RTF1Q92541 710 aaKnown RBP24.47■■□□□ 1.51
NHLRC1-201ENST00000340650 PHRF1Q9P1Y6 1649 aaKnown RBP24.47■■□□□ 1.51
NHLRC1-201ENST00000340650 ANKRD24Q8TF21 1146 aa24.46■■□□□ 1.51
NHLRC1-201ENST00000340650 PANK2Q9BZ23 570 aa24.46■■□□□ 1.51
NHLRC1-201ENST00000340650 SPATA31A3Q5VYP0 1347 aa24.46■■□□□ 1.51
NHLRC1-201ENST00000340650 RBM25P49756 843 aaKnown RBP24.46■■□□□ 1.51
NHLRC1-201ENST00000340650 GZF1Q9H116 711 aaPredicted RBP24.46■■□□□ 1.51
NHLRC1-201ENST00000340650 CLCN1P35523 988 aa24.45■■□□□ 1.5
NHLRC1-201ENST00000340650 ITPRIPQ8IWB1 547 aa24.45■■□□□ 1.5
NHLRC1-201ENST00000340650 SNX21Q969T3 373 aa24.45■■□□□ 1.5
NHLRC1-201ENST00000340650 ISY1Q9ULR0 285 aaKnown RBP24.45■■□□□ 1.5
NHLRC1-201ENST00000340650 C8orf58Q8NAV2 365 aa24.43■■□□□ 1.5
NHLRC1-201ENST00000340650 ZBTB40Q9NUA8 1239 aa24.43■■□□□ 1.5
NHLRC1-201ENST00000340650 VAMP4O75379 141 aa24.43■■□□□ 1.5
NHLRC1-201ENST00000340650 MIS18AQ9NYP9 233 aa24.43■■□□□ 1.5
NHLRC1-201ENST00000340650 RGPD2P0DJD1 1756 aa24.43■■□□□ 1.5
NHLRC1-201ENST00000340650 ARXQ96QS3 562 aa24.42■■□□□ 1.5
NHLRC1-201ENST00000340650 NOB1Q9ULX3 412 aaKnown RBP24.42■■□□□ 1.5
NHLRC1-201ENST00000340650 TWISTNBQ3B726 338 aaPredicted RBP24.41■■□□□ 1.5
NHLRC1-201ENST00000340650 CRB1P82279 1406 aa24.41■■□□□ 1.5
NHLRC1-201ENST00000340650 CHL1O00533 1208 aa24.41■■□□□ 1.5
NHLRC1-201ENST00000340650 NUCB1Q02818 461 aa24.41■■□□□ 1.5
NHLRC1-201ENST00000340650 KRT24Q2M2I5 525 aa24.41■■□□□ 1.5
NHLRC1-201ENST00000340650 TMEM57Q8N5G2 664 aa24.41■■□□□ 1.5
NHLRC1-201ENST00000340650 GNAT3A8MTJ3 354 aa24.4■■□□□ 1.5
NHLRC1-201ENST00000340650 CHRNA2Q15822 529 aa24.4■■□□□ 1.5
NHLRC1-201ENST00000340650 KIF16BQ96L93 1317 aa24.39■■□□□ 1.5
NHLRC1-201ENST00000340650 CIZ1Q9ULV3 898 aaPredicted RBP24.39■■□□□ 1.5
NHLRC1-201ENST00000340650 ALDH1L2Q3SY69 923 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms