RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 NFKBIBQ15653 356 aa14.71□□□□□ -0.06
HDAC6-201ENST00000334136 FAM161AQ3B820 660 aa14.71□□□□□ -0.06
HDAC6-201ENST00000334136 TMOD3Q9NYL9 352 aa14.71□□□□□ -0.06
HDAC6-201ENST00000334136 MFAP1P55081 439 aaKnown RBP14.7□□□□□ -0.06
HDAC6-201ENST00000334136 USP21Q9UK80 565 aa14.7□□□□□ -0.06
HDAC6-201ENST00000334136 KIAA0232Q92628 1395 aa14.7□□□□□ -0.06
HDAC6-201ENST00000334136 OS9Q13438 667 aaPredicted RBP14.7□□□□□ -0.06
HDAC6-201ENST00000334136 ARHGEF25Q86VW2 580 aa14.7□□□□□ -0.06
HDAC6-201ENST00000334136 MIS18AQ9NYP9 233 aa14.7□□□□□ -0.06
HDAC6-201ENST00000334136 PLCB2Q00722 1185 aa14.69□□□□□ -0.06
HDAC6-201ENST00000334136 FKBP5Q13451 457 aaPredicted RBP14.69□□□□□ -0.06
HDAC6-201ENST00000334136 TWISTNBQ3B726 338 aaPredicted RBP14.69□□□□□ -0.06
HDAC6-201ENST00000334136 GOLGA6L3A6NEY3 463 aa14.69□□□□□ -0.06
HDAC6-201ENST00000334136 TAF7Q15545 349 aaPredicted RBP14.69□□□□□ -0.06
HDAC6-201ENST00000334136 ZKSCAN2Q63HK3 967 aa14.69□□□□□ -0.06
HDAC6-201ENST00000334136 PTCD1O75127 700 aaKnown RBP14.69□□□□□ -0.06
HDAC6-201ENST00000334136 DDX58O95786 925 aaKnown RBP14.69□□□□□ -0.06
HDAC6-201ENST00000334136 IL13P35225 146 aa14.69□□□□□ -0.06
HDAC6-201ENST00000334136 NCOA3Q9Y6Q9 1424 aa14.68□□□□□ -0.06
HDAC6-201ENST00000334136 NEXNQ0ZGT2 675 aa14.68□□□□□ -0.06
HDAC6-201ENST00000334136 AIMP1Q12904 312 aaKnown RBP14.68□□□□□ -0.06
HDAC6-201ENST00000334136 HDAC5Q9UQL6 1122 aa14.68□□□□□ -0.06
HDAC6-201ENST00000334136 HDGFL1Q5TGJ6 251 aa14.67□□□□□ -0.06
HDAC6-201ENST00000334136 NBPF6Q5VWK0 638 aa14.67□□□□□ -0.06
HDAC6-201ENST00000334136 CENPQQ7L2Z9 268 aaPredicted RBP14.67□□□□□ -0.06
HDAC6-201ENST00000334136 NBPF4Q96M43 638 aa14.67□□□□□ -0.06
HDAC6-201ENST00000334136 CCDC30Q5VVM6 783 aa14.67□□□□□ -0.06
HDAC6-201ENST00000334136 FAM83GA6ND36 823 aa14.66□□□□□ -0.06
HDAC6-201ENST00000334136 FOXD4L1Q9NU39 408 aa14.66□□□□□ -0.06
HDAC6-201ENST00000334136 MTHFSDQ2M296 383 aaKnown RBP14.66□□□□□ -0.06
HDAC6-201ENST00000334136 API5Q9BZZ5 524 aaKnown RBP14.66□□□□□ -0.06
HDAC6-201ENST00000334136 IQGAP1P46940 1657 aa14.65□□□□□ -0.06
HDAC6-201ENST00000334136 PHACTR3Q96KR7 559 aa14.65□□□□□ -0.06
HDAC6-201ENST00000334136 CHMP3Q9Y3E7 222 aa14.65□□□□□ -0.06
HDAC6-201ENST00000334136 MSNP26038 577 aaKnown RBP14.64□□□□□ -0.07
HDAC6-201ENST00000334136 AKAP4Q5JQC9 854 aa14.64□□□□□ -0.07
HDAC6-201ENST00000334136 CDCA7Q9BWT1 371 aaPredicted RBP14.64□□□□□ -0.07
HDAC6-201ENST00000334136 COG6Q9Y2V7 657 aa14.64□□□□□ -0.07
HDAC6-201ENST00000334136 AATKQ6ZMQ8 1374 aa14.64□□□□□ -0.07
HDAC6-201ENST00000334136 FAM98CQ17RN3 349 aaKnown RBP14.64□□□□□ -0.07
HDAC6-201ENST00000334136 MED14O60244 1454 aa14.64□□□□□ -0.07
HDAC6-201ENST00000334136 INSRP06213 1382 aa14.64□□□□□ -0.07
HDAC6-201ENST00000334136 RIC3Q7Z5B4 369 aa14.64□□□□□ -0.07
HDAC6-201ENST00000334136 LARP1Q6PKG0 1096 aaKnown RBP14.63□□□□□ -0.07
HDAC6-201ENST00000334136 KIF16BQ96L93 1317 aa14.63□□□□□ -0.07
HDAC6-201ENST00000334136 RSPH6AQ9H0K4 717 aa14.63□□□□□ -0.07
HDAC6-201ENST00000334136 RWDD1Q9H446 243 aaPredicted RBP14.63□□□□□ -0.07
HDAC6-201ENST00000334136 TNS3Q68CZ2 1445 aa14.63□□□□□ -0.07
HDAC6-201ENST00000334136 SKAP1Q86WV1 359 aa14.63□□□□□ -0.07
HDAC6-201ENST00000334136 IFT57Q9NWB7 429 aa14.63□□□□□ -0.07
HDAC6-201ENST00000334136 APBB1O00213 710 aa14.63□□□□□ -0.07
HDAC6-201ENST00000334136 HSPA1LP34931 641 aa14.62□□□□□ -0.07
HDAC6-201ENST00000334136 ACSBG1Q96GR2 724 aa14.62□□□□□ -0.07
HDAC6-201ENST00000334136 SLFN5Q08AF3 891 aa14.62□□□□□ -0.07
HDAC6-201ENST00000334136 FRAT2O75474 233 aaPredicted RBP14.62□□□□□ -0.07
HDAC6-201ENST00000334136 SLC4A2P04920 1241 aa14.62□□□□□ -0.07
HDAC6-201ENST00000334136 C9orf78Q9NZ63 289 aaPredicted RBP14.62□□□□□ -0.07
HDAC6-201ENST00000334136 DCCP43146 1447 aa14.62□□□□□ -0.07
HDAC6-201ENST00000334136 DZIP1LQ8IYY4 767 aaKnown RBP14.61□□□□□ -0.07
HDAC6-201ENST00000334136 CPSF1Q10570 1443 aaKnown RBP14.6□□□□□ -0.07
HDAC6-201ENST00000334136 STARD3NLO95772 234 aa14.6□□□□□ -0.07
HDAC6-201ENST00000334136 TAF7LQ5H9L4 462 aa14.6□□□□□ -0.07
HDAC6-201ENST00000334136 CFAP44Q96MT7 982 aa14.6□□□□□ -0.07
HDAC6-201ENST00000334136 DUSP27Q5VZP5 1158 aa14.6□□□□□ -0.07
HDAC6-201ENST00000334136 VSIG10Q8N0Z9 540 aa14.6□□□□□ -0.07
HDAC6-201ENST00000334136 MYL6BP14649 208 aa14.6□□□□□ -0.07
HDAC6-201ENST00000334136 CPS1P31327 1500 aa14.6□□□□□ -0.07
HDAC6-201ENST00000334136 CDC42BPGQ6DT37 1551 aa14.6□□□□□ -0.07
HDAC6-201ENST00000334136 JCADQ9P266 1359 aa14.6□□□□□ -0.07
HDAC6-201ENST00000334136 HTATSF1O43719 755 aaKnown RBP14.59□□□□□ -0.07
HDAC6-201ENST00000334136 QTRT2Q9H974 415 aaKnown RBP14.59□□□□□ -0.07
HDAC6-201ENST00000334136 FMNL2Q96PY5 1086 aa14.59□□□□□ -0.07
HDAC6-201ENST00000334136 BACH2Q9BYV9 841 aa14.59□□□□□ -0.07
HDAC6-201ENST00000334136 TRPC5Q9UL62 973 aaPredicted RBP14.59□□□□□ -0.07
HDAC6-201ENST00000334136 PCDH11XQ9BZA7 1347 aa14.59□□□□□ -0.07
HDAC6-201ENST00000334136 PCDH11YQ9BZA8 1340 aa14.59□□□□□ -0.07
HDAC6-201ENST00000334136 CT47B1P0C2W7 299 aaPredicted RBP14.59□□□□□ -0.07
HDAC6-201ENST00000334136 PRKCSHP14314 528 aaPredicted RBP14.59□□□□□ -0.07
HDAC6-201ENST00000334136 DCAF5Q96JK2 942 aa14.59□□□□□ -0.07
HDAC6-201ENST00000334136 GBP4Q96PP9 640 aa14.58□□□□□ -0.08
HDAC6-201ENST00000334136 MST1RQ04912 1400 aa14.58□□□□□ -0.08
HDAC6-201ENST00000334136 HSP90AA2PQ14568 343 aaPredicted RBP14.58□□□□□ -0.08
HDAC6-201ENST00000334136 CARD10Q9BWT7 1032 aa14.58□□□□□ -0.08
HDAC6-201ENST00000334136 ERBB3P21860 1342 aa14.58□□□□□ -0.08
HDAC6-201ENST00000334136 WDR17Q8IZU2 1322 aa14.58□□□□□ -0.08
HDAC6-201ENST00000334136 HMMRO75330 724 aa14.58□□□□□ -0.08
HDAC6-201ENST00000334136 SOS2Q07890 1332 aaPredicted RBP14.58□□□□□ -0.08
HDAC6-201ENST00000334136 CASC1Q6TDU7 716 aa14.57□□□□□ -0.08
HDAC6-201ENST00000334136 KIF6Q6ZMV9 814 aa14.57□□□□□ -0.08
HDAC6-201ENST00000334136 NFATC2IPQ8NCF5 419 aa14.57□□□□□ -0.08
HDAC6-201ENST00000334136 HMGB2P26583 209 aaKnown RBP14.57□□□□□ -0.08
HDAC6-201ENST00000334136 TMX4Q9H1E5 349 aaPredicted RBP14.57□□□□□ -0.08
HDAC6-201ENST00000334136 RTL1A6NKG5 1358 aa14.57□□□□□ -0.08
HDAC6-201ENST00000334136 KIF24Q5T7B8 1368 aa14.57□□□□□ -0.08
HDAC6-201ENST00000334136 USP31Q70CQ4 1352 aa14.57□□□□□ -0.08
HDAC6-201ENST00000334136 SLC39A6Q13433 755 aa14.56□□□□□ -0.08
HDAC6-201ENST00000334136 MAP3K5Q99683 1374 aa14.56□□□□□ -0.08
HDAC6-201ENST00000334136 ZNF428Q96B54 188 aa14.56□□□□□ -0.08
HDAC6-201ENST00000334136 LRRC7Q96NW7 1537 aa14.56□□□□□ -0.08
HDAC6-201ENST00000334136 UNC5CLQ8IV45 518 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms