RNA–Protein interactions for RNA: ENSMUST00000221041.1

Trim9-205, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 3,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-205ENSMUST00000221041 Synj2Q9D2G5 1434 aa12.86□□□□□ -0.35
Trim9-205ENSMUST00000221041 GphnQ8BUV3 769 aaKnown RBP12.86□□□□□ -0.35
Trim9-205ENSMUST00000221041 Pdia3P27773 505 aaKnown RBP12.85□□□□□ -0.35
Trim9-205ENSMUST00000221041 Mcm2P97310 904 aa12.85□□□□□ -0.35
Trim9-205ENSMUST00000221041 Prune1Q8BIW1 454 aa12.85□□□□□ -0.35
Trim9-205ENSMUST00000221041 Myo5cE9Q1F5 1742 aa12.85□□□□□ -0.35
Trim9-205ENSMUST00000221041 Kiaa1210E9Q0C6 1637 aa12.85□□□□□ -0.35
Trim9-205ENSMUST00000221041 Cnnm1Q0GA42 951 aa12.85□□□□□ -0.35
Trim9-205ENSMUST00000221041 1700010I14RikQ7TPG0 532 aa12.85□□□□□ -0.35
Trim9-205ENSMUST00000221041 Fmnl2A2APV2 1086 aa12.85□□□□□ -0.35
Trim9-205ENSMUST00000221041 Casc1Q6TDU8 730 aa12.84□□□□□ -0.35
Trim9-205ENSMUST00000221041 Pik3r4Q8VD65 1358 aa12.84□□□□□ -0.35
Trim9-205ENSMUST00000221041 Ercc6l2Q9JIM3 1537 aa12.84□□□□□ -0.35
Trim9-205ENSMUST00000221041 Gm21698A0A087WQP8 267 aa12.84□□□□□ -0.35
Trim9-205ENSMUST00000221041 Gm21671G3UY31 267 aa12.84□□□□□ -0.35
Trim9-205ENSMUST00000221041 Tmc1Q8R4P5 757 aa12.84□□□□□ -0.35
Trim9-205ENSMUST00000221041 Hoxb7P09024 217 aa12.84□□□□□ -0.35
Trim9-205ENSMUST00000221041 Ddx17Q501J6 650 aaKnown RBP12.84□□□□□ -0.35
Trim9-205ENSMUST00000221041 Itsn2Q9Z0R6 1659 aa12.84□□□□□ -0.35
Trim9-205ENSMUST00000221041 Hoxc9P09633 260 aa12.83□□□□□ -0.36
Trim9-205ENSMUST00000221041 KdrP35918 1367 aa12.83□□□□□ -0.36
Trim9-205ENSMUST00000221041 Sytl4Q9R0Q1 673 aa12.82□□□□□ -0.36
Trim9-205ENSMUST00000221041 Atg4a-psA0A0G2JFS9 396 aa12.82□□□□□ -0.36
Trim9-205ENSMUST00000221041 Atg4aQ8C9S8 396 aa12.82□□□□□ -0.36
Trim9-205ENSMUST00000221041 Pes1Q9EQ61 584 aaKnown RBP12.82□□□□□ -0.36
Trim9-205ENSMUST00000221041 Arhgap23Q69ZH9 1483 aa12.82□□□□□ -0.36
Trim9-205ENSMUST00000221041 CrebrfQ8CDG5 640 aaKnown RBP12.82□□□□□ -0.36
Trim9-205ENSMUST00000221041 Plxnc1Q9QZC2 1574 aa12.82□□□□□ -0.36
Trim9-205ENSMUST00000221041 Gm10093D3YYI8 482 aa12.81□□□□□ -0.36
Trim9-205ENSMUST00000221041 Hdac1O09106 482 aaKnown RBP12.81□□□□□ -0.36
Trim9-205ENSMUST00000221041 Znf692Q3U381 531 aa12.81□□□□□ -0.36
Trim9-205ENSMUST00000221041 Usp48Q3V0C5 1052 aa12.81□□□□□ -0.36
Trim9-205ENSMUST00000221041 FosbP13346 338 aa12.81□□□□□ -0.36
Trim9-205ENSMUST00000221041 Pa2g4P50580 394 aaKnown RBP12.81□□□□□ -0.36
Trim9-205ENSMUST00000221041 F2rP30558 430 aa12.81□□□□□ -0.36
Trim9-205ENSMUST00000221041 Adgrl1Q80TR1 1466 aa12.81□□□□□ -0.36
Trim9-205ENSMUST00000221041 St18Q80TY4 1045 aa12.8□□□□□ -0.36
Trim9-205ENSMUST00000221041 Zkscan1Q8BGS3 561 aaKnown RBP12.8□□□□□ -0.36
Trim9-205ENSMUST00000221041 Q8C5K5 320 aa12.8□□□□□ -0.36
Trim9-205ENSMUST00000221041 Iffo2Q8R2V2 512 aa12.8□□□□□ -0.36
Trim9-205ENSMUST00000221041 Atf3Q60765 181 aa12.8□□□□□ -0.36
Trim9-205ENSMUST00000221041 Chl1P70232 1209 aa12.8□□□□□ -0.36
Trim9-205ENSMUST00000221041 Nucb1Q02819 459 aaKnown RBP12.8□□□□□ -0.36
Trim9-205ENSMUST00000221041 BcanQ61361 883 aa12.8□□□□□ -0.36
Trim9-205ENSMUST00000221041 Rasa1E9PYG6 1038 aa12.79□□□□□ -0.36
Trim9-205ENSMUST00000221041 Cavin2Q63918 418 aaKnown RBP12.79□□□□□ -0.36
Trim9-205ENSMUST00000221041 Acsbg1Q99PU5 721 aa12.79□□□□□ -0.36
Trim9-205ENSMUST00000221041 Med14A2ABV5 1459 aaKnown RBP12.79□□□□□ -0.36
Trim9-205ENSMUST00000221041 Nol8Q3UHX0 1147 aaKnown RBP12.79□□□□□ -0.36
Trim9-205ENSMUST00000221041 NexnQ7TPW1 607 aa12.79□□□□□ -0.36
Trim9-205ENSMUST00000221041 CenppQ9CZ92 286 aa12.79□□□□□ -0.36
Trim9-205ENSMUST00000221041 Kif24Q6NWW5 1356 aa12.79□□□□□ -0.36
Trim9-205ENSMUST00000221041 Brf1Q8CFK2 676 aa12.79□□□□□ -0.36
Trim9-205ENSMUST00000221041 Ahdc1Q6PAL7 1594 aaKnown RBP12.78□□□□□ -0.36
Trim9-205ENSMUST00000221041 Pof1bQ8K4L4 587 aa12.78□□□□□ -0.36
Trim9-205ENSMUST00000221041 Gdpd2Q9ESM6 539 aa12.78□□□□□ -0.36
Trim9-205ENSMUST00000221041 Map3k2Q61083 619 aa12.78□□□□□ -0.36
Trim9-205ENSMUST00000221041 PsapQ61207 557 aaKnown RBP12.78□□□□□ -0.36
Trim9-205ENSMUST00000221041 Gimap6Q8K349 305 aa12.78□□□□□ -0.36
Trim9-205ENSMUST00000221041 Bloc1s4Q8VED2 215 aa12.78□□□□□ -0.36
Trim9-205ENSMUST00000221041 Ppp6r3Q922D4 844 aa12.78□□□□□ -0.36
Trim9-205ENSMUST00000221041 Clstn1Q9EPL2 979 aa12.78□□□□□ -0.36
Trim9-205ENSMUST00000221041 Mad1l1Q9WTX8 717 aaKnown RBP12.78□□□□□ -0.36
Trim9-205ENSMUST00000221041 Aldh8a1Q8BH00 487 aa12.78□□□□□ -0.36
Trim9-205ENSMUST00000221041 Dzip1Q8BMD2 852 aa12.78□□□□□ -0.36
Trim9-205ENSMUST00000221041 Fndc1E9Q043 1732 aa12.77□□□□□ -0.36
Trim9-205ENSMUST00000221041 EvcP57680 1005 aa12.77□□□□□ -0.37
Trim9-205ENSMUST00000221041 Polr3gQ6NXY9 223 aa12.77□□□□□ -0.37
Trim9-205ENSMUST00000221041 Bag4Q8CI61 457 aa12.77□□□□□ -0.37
Trim9-205ENSMUST00000221041 Tceanc2Q8R2M0 207 aa12.77□□□□□ -0.37
Trim9-205ENSMUST00000221041 Kif2cQ922S8 721 aa12.77□□□□□ -0.37
Trim9-205ENSMUST00000221041 Il4rP16382 810 aa12.76□□□□□ -0.37
Trim9-205ENSMUST00000221041 Ppfia3P60469 1194 aa12.76□□□□□ -0.37
Trim9-205ENSMUST00000221041 Arhgef1Q61210 920 aaKnown RBP12.76□□□□□ -0.37
Trim9-205ENSMUST00000221041 Slc39a6Q8C145 765 aa12.76□□□□□ -0.37
Trim9-205ENSMUST00000221041 Edc3Q8K2D3 508 aaKnown RBP12.76□□□□□ -0.37
Trim9-205ENSMUST00000221041 Speer4bQ9D9F7 267 aa12.76□□□□□ -0.37
Trim9-205ENSMUST00000221041 TimelessQ9R1X4 1197 aa12.76□□□□□ -0.37
Trim9-205ENSMUST00000221041 Astn2Q80Z10 1352 aa12.76□□□□□ -0.37
Trim9-205ENSMUST00000221041 Atp8b2P98199 1209 aa12.76□□□□□ -0.37
Trim9-205ENSMUST00000221041 MarsQ68FL6 902 aaKnown RBP12.76□□□□□ -0.37
Trim9-205ENSMUST00000221041 RestQ8VIG1 1082 aa12.76□□□□□ -0.37
Trim9-205ENSMUST00000221041 Il1rapl2Q9ERS6 686 aa12.76□□□□□ -0.37
Trim9-205ENSMUST00000221041 Mroh1E0CZ22 1640 aa12.76□□□□□ -0.37
Trim9-205ENSMUST00000221041 FancaQ9JL70 1439 aa12.76□□□□□ -0.37
Trim9-205ENSMUST00000221041 Abca17E9PX95 1733 aa12.76□□□□□ -0.37
Trim9-205ENSMUST00000221041 Anapc15-psA0A140T8L6 141 aa12.75□□□□□ -0.37
Trim9-205ENSMUST00000221041 Tpx2A2APB8 745 aaKnown RBP12.75□□□□□ -0.37
Trim9-205ENSMUST00000221041 Atp6v1dP57746 247 aa12.75□□□□□ -0.37
Trim9-205ENSMUST00000221041 Dixdc1Q80Y83 711 aa12.75□□□□□ -0.37
Trim9-205ENSMUST00000221041 Ncbp3Q8BZR9 615 aaKnown RBP12.75□□□□□ -0.37
Trim9-205ENSMUST00000221041 RereQ80TZ9 1558 aa12.75□□□□□ -0.37
Trim9-205ENSMUST00000221041 Slc26a8Q8R0C3 999 aa12.75□□□□□ -0.37
Trim9-205ENSMUST00000221041 PtprmP28828 1452 aa12.75□□□□□ -0.37
Trim9-205ENSMUST00000221041 Q8BT18 775 aa12.75□□□□□ -0.37
Trim9-205ENSMUST00000221041 Smc3Q9CW03 1217 aaKnown RBP12.75□□□□□ -0.37
Trim9-205ENSMUST00000221041 Clasp1Q80TV8 1535 aaKnown RBP12.74□□□□□ -0.37
Trim9-205ENSMUST00000221041 Lmod3E9QA62 571 aa12.74□□□□□ -0.37
Trim9-205ENSMUST00000221041 Tm6sf1P58749 370 aa12.74□□□□□ -0.37
Trim9-205ENSMUST00000221041 Tubgcp6G5E8P0 1769 aa12.74□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 63.3 ms