RNA–Protein interactions for RNA: ENSMUST00000221041.1

Trim9-205, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 3,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-205ENSMUST00000221041 Rhox8Q6VSS7 320 aa19.31■□□□□ 0.68
Trim9-205ENSMUST00000221041 NischQ80TM9 1593 aa19.05■□□□□ 0.64
Trim9-205ENSMUST00000221041 Abcc9P70170 1546 aa18.15■□□□□ 0.5
Trim9-205ENSMUST00000221041 Abcc8B2RUS7 1588 aa17.84■□□□□ 0.45
Trim9-205ENSMUST00000221041 Ccdc136Q3TVA9 1136 aa17.79■□□□□ 0.44
Trim9-205ENSMUST00000221041 Gm35339A0A140LHH9 1649 aa17.7■□□□□ 0.42
Trim9-205ENSMUST00000221041 Ehmt2Q9Z148 1263 aaKnown RBP17.68■□□□□ 0.42
Trim9-205ENSMUST00000221041 Trim41Q5NCC3 630 aa17.14■□□□□ 0.33
Trim9-205ENSMUST00000221041 Ccdc180J3QNE4 1664 aa17.09■□□□□ 0.33
Trim9-205ENSMUST00000221041 Cngb1E1AZ71 1325 aa17.05■□□□□ 0.32
Trim9-205ENSMUST00000221041 Gab3Q8BSM5 595 aa17.02■□□□□ 0.31
Trim9-205ENSMUST00000221041 Rtl1Q7M732 1744 aa17■□□□□ 0.31
Trim9-205ENSMUST00000221041 Rpgrip1Q9EPQ2 1331 aa16.92■□□□□ 0.3
Trim9-205ENSMUST00000221041 Zcchc6Q5BLK4 1491 aaKnown RBP16.86■□□□□ 0.29
Trim9-205ENSMUST00000221041 Esf1Q3V1V3 845 aaKnown RBP16.85■□□□□ 0.29
Trim9-205ENSMUST00000221041 HrcG5E8J6 738 aa16.83■□□□□ 0.29
Trim9-205ENSMUST00000221041 Acin1Q9JIX8 1338 aaKnown RBP16.73■□□□□ 0.27
Trim9-205ENSMUST00000221041 Rb1cc1Q9ESK9 1588 aa16.68■□□□□ 0.26
Trim9-205ENSMUST00000221041 Dcaf1Q80TR8 1506 aa16.55■□□□□ 0.24
Trim9-205ENSMUST00000221041 Zeb1Q64318 1117 aa16.47■□□□□ 0.23
Trim9-205ENSMUST00000221041 Myt1lP97500 1187 aa16.45■□□□□ 0.22
Trim9-205ENSMUST00000221041 Chic1Q8CBW7 227 aa16.44■□□□□ 0.22
Trim9-205ENSMUST00000221041 Kdm5dQ62240 1548 aa16.43■□□□□ 0.22
Trim9-205ENSMUST00000221041 ScribQ80U72 1612 aa16.42■□□□□ 0.22
Trim9-205ENSMUST00000221041 Baz1aO88379 1555 aa16.35■□□□□ 0.21
Trim9-205ENSMUST00000221041 NacadQ5SWP3 1504 aa16.34■□□□□ 0.21
Trim9-205ENSMUST00000221041 Npm2Q80W85 207 aa16.29■□□□□ 0.2
Trim9-205ENSMUST00000221041 UbtfP25976 765 aaKnown RBP16.29■□□□□ 0.2
Trim9-205ENSMUST00000221041 Pcgf6Q99NA9 353 aa16.27■□□□□ 0.19
Trim9-205ENSMUST00000221041 Il27Q8K3I6 234 aa16.14■□□□□ 0.18
Trim9-205ENSMUST00000221041 Wdr66E9Q743 1299 aa16.13■□□□□ 0.17
Trim9-205ENSMUST00000221041 Supt5hO55201 1082 aaKnown RBP16.13■□□□□ 0.17
Trim9-205ENSMUST00000221041 Cep164Q5DU05 1446 aa16.11■□□□□ 0.17
Trim9-205ENSMUST00000221041 Mier1Q5UAK0 511 aa16.07■□□□□ 0.16
Trim9-205ENSMUST00000221041 Brd4Q9ESU6 1400 aaKnown RBP16.05■□□□□ 0.16
Trim9-205ENSMUST00000221041 Ppargc1bQ8VHJ7 1014 aa16.03■□□□□ 0.16
Trim9-205ENSMUST00000221041 Rsf1E9PWW9 1441 aaKnown RBP16.02■□□□□ 0.15
Trim9-205ENSMUST00000221041 Ap3b1Q9Z1T1 1105 aa15.95■□□□□ 0.14
Trim9-205ENSMUST00000221041 NefmP08553 848 aa15.95■□□□□ 0.14
Trim9-205ENSMUST00000221041 Las1lA2BE28 776 aaKnown RBP15.94■□□□□ 0.14
Trim9-205ENSMUST00000221041 Cecr2E9Q2Z1 1453 aa15.93■□□□□ 0.14
Trim9-205ENSMUST00000221041 Ccdc88bQ4QRL3 1481 aa15.9■□□□□ 0.14
Trim9-205ENSMUST00000221041 Sycp2Q9CUU3 1500 aa15.9■□□□□ 0.14
Trim9-205ENSMUST00000221041 Plekhg3Q4VAC9 1341 aa15.85■□□□□ 0.13
Trim9-205ENSMUST00000221041 Smarca2Q6DIC0 1577 aa15.84■□□□□ 0.13
Trim9-205ENSMUST00000221041 Golga3P55937 1487 aa15.83■□□□□ 0.12
Trim9-205ENSMUST00000221041 Crybg2B7ZCC2 1516 aa15.74■□□□□ 0.11
Trim9-205ENSMUST00000221041 Ube2uB1AUC4 352 aa15.69■□□□□ 0.1
Trim9-205ENSMUST00000221041 Sall2Q9QX96 1004 aa15.69■□□□□ 0.1
Trim9-205ENSMUST00000221041 Synj1Q8CHC4 1574 aa15.63■□□□□ 0.09
Trim9-205ENSMUST00000221041 CftrP26361 1476 aa15.6■□□□□ 0.09
Trim9-205ENSMUST00000221041 Eid3Q3V124 375 aa15.6■□□□□ 0.09
Trim9-205ENSMUST00000221041 Lmod2Q3UHZ5 550 aa15.58■□□□□ 0.09
Trim9-205ENSMUST00000221041 Fam50aQ9WV03 339 aaKnown RBP15.58■□□□□ 0.09
Trim9-205ENSMUST00000221041 Neurod1Q60867 357 aa15.58■□□□□ 0.08
Trim9-205ENSMUST00000221041 Clip1Q922J3 1391 aa15.57■□□□□ 0.08
Trim9-205ENSMUST00000221041 Aebp2Q9Z248 504 aaKnown RBP15.51■□□□□ 0.07
Trim9-205ENSMUST00000221041 TonslQ6NZL6 1363 aa15.51■□□□□ 0.07
Trim9-205ENSMUST00000221041 Npm1Q61937 292 aaKnown RBP15.46■□□□□ 0.07
Trim9-205ENSMUST00000221041 Mapk8ip2Q9ERE9 830 aa15.45■□□□□ 0.06
Trim9-205ENSMUST00000221041 Nop58Q6DFW4 536 aaKnown RBP15.43■□□□□ 0.06
Trim9-205ENSMUST00000221041 Cdk11bP24788 784 aaKnown RBP15.42■□□□□ 0.06
Trim9-205ENSMUST00000221041 BicraF8VPZ9 1578 aa15.39■□□□□ 0.05
Trim9-205ENSMUST00000221041 Ubl4bQ9CQ84 188 aa15.37■□□□□ 0.05
Trim9-205ENSMUST00000221041 Kif15Q6P9L6 1387 aa15.36■□□□□ 0.05
Trim9-205ENSMUST00000221041 Cep162Q6ZQ06 1403 aa15.35■□□□□ 0.05
Trim9-205ENSMUST00000221041 NclP09405 707 aaKnown RBP15.32■□□□□ 0.04
Trim9-205ENSMUST00000221041 Rapgef2Q8CHG7 1496 aa15.32■□□□□ 0.04
Trim9-205ENSMUST00000221041 Slc24a1Q91WD8 1130 aa15.31■□□□□ 0.04
Trim9-205ENSMUST00000221041 ClspnQ80YR7 1315 aa15.3■□□□□ 0.04
Trim9-205ENSMUST00000221041 Fmn1Q05860 1466 aa15.29■□□□□ 0.04
Trim9-205ENSMUST00000221041 Setd5Q5XJV7 1441 aa15.28■□□□□ 0.04
Trim9-205ENSMUST00000221041 Smarca4Q3TKT4 1613 aaKnown RBP15.26■□□□□ 0.03
Trim9-205ENSMUST00000221041 BlmO88700 1416 aa15.23■□□□□ 0.03
Trim9-205ENSMUST00000221041 Gm38655A0A286YDK6 273 aa15.22■□□□□ 0.03
Trim9-205ENSMUST00000221041 Cttnbp2B9EJA2 1648 aa15.21■□□□□ 0.03
Trim9-205ENSMUST00000221041 Cc2d2aQ8CFW7 1633 aa15.19■□□□□ 0.02
Trim9-205ENSMUST00000221041 Csrnp3P59055 597 aa15.19■□□□□ 0.02
Trim9-205ENSMUST00000221041 Pds5bQ4VA53 1446 aaKnown RBP15.15■□□□□ 0.02
Trim9-205ENSMUST00000221041 Chic2Q9D9G3 165 aa15.15■□□□□ 0.02
Trim9-205ENSMUST00000221041 Atad2bE9Q166 1460 aaKnown RBP15.13■□□□□ 0.01
Trim9-205ENSMUST00000221041 Eea1Q8BL66 1411 aa15.13■□□□□ 0.01
Trim9-205ENSMUST00000221041 Iqgap2Q3UQ44 1575 aa15.12■□□□□ 0.01
Trim9-205ENSMUST00000221041 Anks4bQ8K3X6 423 aa15.07■□□□□ 0
Trim9-205ENSMUST00000221041 Zbtb7cQ8VCZ7 619 aa15.05■□□□□ 0
Trim9-205ENSMUST00000221041 Ercc6F8VPZ5 1481 aa15.05■□□□□ -0
Trim9-205ENSMUST00000221041 Top2bQ64511 1612 aa15.03■□□□□ -0
Trim9-205ENSMUST00000221041 Fkbp15Q6P9Q6 1216 aaKnown RBP15.01□□□□□ -0.01
Trim9-205ENSMUST00000221041 Ccdc18Q640L5 1455 aa15□□□□□ -0.01
Trim9-205ENSMUST00000221041 Top2aQ01320 1528 aaKnown RBP15□□□□□ -0.01
Trim9-205ENSMUST00000221041 PtprkP35822 1457 aa14.99□□□□□ -0.01
Trim9-205ENSMUST00000221041 Cux2P70298 1426 aa14.94□□□□□ -0.02
Trim9-205ENSMUST00000221041 Hspa5P20029 655 aaKnown RBP14.94□□□□□ -0.02
Trim9-205ENSMUST00000221041 CenpbP27790 599 aa14.94□□□□□ -0.02
Trim9-205ENSMUST00000221041 Eif5bQ05D44 1216 aaKnown RBP14.92□□□□□ -0.02
Trim9-205ENSMUST00000221041 Baz1bQ9Z277 1479 aa14.92□□□□□ -0.02
Trim9-205ENSMUST00000221041 1700123L14RikQ3V2K7 440 aa14.9□□□□□ -0.02
Trim9-205ENSMUST00000221041 Zbtb4Q5F293 982 aa14.9□□□□□ -0.02
Trim9-205ENSMUST00000221041 Frmpd1A2AKB4 1549 aa14.88□□□□□ -0.03
Trim9-205ENSMUST00000221041 Arhgap35Q91YM2 1499 aa14.88□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 127.9 ms