RNA–Protein interactions for RNA: ENSMUST00000194959.5

Usp4-209, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Usp4, Length 3,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-209ENSMUST00000194959 Kif2cQ922S8 721 aa12.47□□□□□ -0.41
Usp4-209ENSMUST00000194959 Rtn4Q99P72 1162 aaKnown RBP12.47□□□□□ -0.41
Usp4-209ENSMUST00000194959 Dnajc10Q9DC23 793 aa12.47□□□□□ -0.41
Usp4-209ENSMUST00000194959 Chd4Q6PDQ2 1915 aaKnown RBP12.47□□□□□ -0.41
Usp4-209ENSMUST00000194959 Hoxb7P09024 217 aa12.46□□□□□ -0.41
Usp4-209ENSMUST00000194959 Prune1Q8BIW1 454 aa12.46□□□□□ -0.41
Usp4-209ENSMUST00000194959 GphnQ8BUV3 769 aaKnown RBP12.46□□□□□ -0.41
Usp4-209ENSMUST00000194959 Gtf3c3Q3TMP1 882 aa12.46□□□□□ -0.41
Usp4-209ENSMUST00000194959 Stk3Q9JI10 497 aa12.46□□□□□ -0.41
Usp4-209ENSMUST00000194959 Phactr2B1AVP0 632 aa12.46□□□□□ -0.42
Usp4-209ENSMUST00000194959 Chl1P70232 1209 aa12.46□□□□□ -0.42
Usp4-209ENSMUST00000194959 Sos1Q62245 1319 aa12.46□□□□□ -0.42
Usp4-209ENSMUST00000194959 Gnai2P08752 355 aaKnown RBP12.45□□□□□ -0.42
Usp4-209ENSMUST00000194959 LifrP42703 1092 aa12.45□□□□□ -0.42
Usp4-209ENSMUST00000194959 PtpruB1AUH1 1446 aa12.45□□□□□ -0.42
Usp4-209ENSMUST00000194959 Wwc1Q5SXA9 1104 aa12.45□□□□□ -0.42
Usp4-209ENSMUST00000194959 Ift172Q6VH22 1749 aa12.45□□□□□ -0.42
Usp4-209ENSMUST00000194959 MarsQ68FL6 902 aaKnown RBP12.44□□□□□ -0.42
Usp4-209ENSMUST00000194959 Ppip5k2Q6ZQB6 1129 aa12.44□□□□□ -0.42
Usp4-209ENSMUST00000194959 Mphosph10Q810V0 681 aaKnown RBP12.44□□□□□ -0.42
Usp4-209ENSMUST00000194959 Tshz3Q8CGV9 1081 aa12.44□□□□□ -0.42
Usp4-209ENSMUST00000194959 Ncbp3Q8BZR9 615 aaKnown RBP12.44□□□□□ -0.42
Usp4-209ENSMUST00000194959 Ccdc9Q8VC31 543 aaKnown RBP12.44□□□□□ -0.42
Usp4-209ENSMUST00000194959 Astn2Q80Z10 1352 aa12.44□□□□□ -0.42
Usp4-209ENSMUST00000194959 Uhrf1bp1B2KF50 1429 aa12.44□□□□□ -0.42
Usp4-209ENSMUST00000194959 Zap70P43404 618 aa12.44□□□□□ -0.42
Usp4-209ENSMUST00000194959 Itsn1Q9Z0R4 1714 aa12.44□□□□□ -0.42
Usp4-209ENSMUST00000194959 Atg4a-psA0A0G2JFS9 396 aa12.43□□□□□ -0.42
Usp4-209ENSMUST00000194959 Hs1bp3Q3TC93 395 aa12.43□□□□□ -0.42
Usp4-209ENSMUST00000194959 Zbtb45Q52KG4 520 aa12.43□□□□□ -0.42
Usp4-209ENSMUST00000194959 Cgnl1Q6AW69 1298 aa12.43□□□□□ -0.42
Usp4-209ENSMUST00000194959 Nol12Q8BG17 217 aa12.43□□□□□ -0.42
Usp4-209ENSMUST00000194959 Atg4aQ8C9S8 396 aa12.43□□□□□ -0.42
Usp4-209ENSMUST00000194959 Nphp1Q9QY53 687 aa12.43□□□□□ -0.42
Usp4-209ENSMUST00000194959 Brpf1B2RRD7 1212 aa12.43□□□□□ -0.42
Usp4-209ENSMUST00000194959 Cyp2d12Q8BVD2 504 aa12.43□□□□□ -0.42
Usp4-209ENSMUST00000194959 Tmc1Q8R4P5 757 aa12.43□□□□□ -0.42
Usp4-209ENSMUST00000194959 Fam50bQ9WTJ8 334 aa12.43□□□□□ -0.42
Usp4-209ENSMUST00000194959 Pcdh10E9PXQ7 1057 aa12.43□□□□□ -0.42
Usp4-209ENSMUST00000194959 SlkO54988 1233 aa12.42□□□□□ -0.42
Usp4-209ENSMUST00000194959 Zmym3Q9JLM4 1370 aa12.42□□□□□ -0.42
Usp4-209ENSMUST00000194959 Arhgef1Q61210 920 aaKnown RBP12.42□□□□□ -0.42
Usp4-209ENSMUST00000194959 Btbd11Q6GQW0 1109 aa12.42□□□□□ -0.42
Usp4-209ENSMUST00000194959 Plcd4Q8K3R3 807 aa12.42□□□□□ -0.42
Usp4-209ENSMUST00000194959 Pdia3P27773 505 aaKnown RBP12.41□□□□□ -0.42
Usp4-209ENSMUST00000194959 Parp14Q2EMV9 1817 aa12.41□□□□□ -0.42
Usp4-209ENSMUST00000194959 Dip2bQ3UH60 1574 aa12.41□□□□□ -0.42
Usp4-209ENSMUST00000194959 Atp7bQ64446 1462 aa12.41□□□□□ -0.42
Usp4-209ENSMUST00000194959 Rsph3aQ3UFY4 516 aa12.41□□□□□ -0.42
Usp4-209ENSMUST00000194959 Zranb3Q6NZP1 1069 aa12.41□□□□□ -0.42
Usp4-209ENSMUST00000194959 Gcc1Q9D4H2 778 aa12.41□□□□□ -0.42
Usp4-209ENSMUST00000194959 Gsdma3Q5Y4Y6 464 aa12.4□□□□□ -0.42
Usp4-209ENSMUST00000194959 Cavin2Q63918 418 aaKnown RBP12.4□□□□□ -0.42
Usp4-209ENSMUST00000194959 Ptpdc1Q6NZK8 747 aa12.4□□□□□ -0.42
Usp4-209ENSMUST00000194959 Gemin5Q8BX17 1502 aaKnown RBP12.39□□□□□ -0.43
Usp4-209ENSMUST00000194959 Zfp777B9EKF4 885 aa12.39□□□□□ -0.43
Usp4-209ENSMUST00000194959 Gm10093D3YYI8 482 aa12.38□□□□□ -0.43
Usp4-209ENSMUST00000194959 Hdac1O09106 482 aaKnown RBP12.38□□□□□ -0.43
Usp4-209ENSMUST00000194959 Casq1O09165 405 aa12.38□□□□□ -0.43
Usp4-209ENSMUST00000194959 Jakmip1Q8BVL9 626 aa12.38□□□□□ -0.43
Usp4-209ENSMUST00000194959 Pik3c2bE9QAN8 1632 aa12.38□□□□□ -0.43
Usp4-209ENSMUST00000194959 Dip2aQ8BWT5 1523 aa12.38□□□□□ -0.43
Usp4-209ENSMUST00000194959 Fmnl2A2APV2 1086 aa12.38□□□□□ -0.43
Usp4-209ENSMUST00000194959 Ppp6r3Q922D4 844 aa12.38□□□□□ -0.43
Usp4-209ENSMUST00000194959 Pa2g4P50580 394 aaKnown RBP12.37□□□□□ -0.43
Usp4-209ENSMUST00000194959 Tlr7P58681 1050 aa12.37□□□□□ -0.43
Usp4-209ENSMUST00000194959 Tm6sf1P58749 370 aa12.37□□□□□ -0.43
Usp4-209ENSMUST00000194959 Dzip1Q8BMD2 852 aa12.37□□□□□ -0.43
Usp4-209ENSMUST00000194959 Nwd1A6H603 1563 aa12.37□□□□□ -0.43
Usp4-209ENSMUST00000194959 Gm21698A0A087WQP8 267 aa12.37□□□□□ -0.43
Usp4-209ENSMUST00000194959 Gm21671G3UY31 267 aa12.37□□□□□ -0.43
Usp4-209ENSMUST00000194959 Cpa2Q504N0 417 aa12.37□□□□□ -0.43
Usp4-209ENSMUST00000194959 Aldh8a1Q8BH00 487 aa12.37□□□□□ -0.43
Usp4-209ENSMUST00000194959 Hspa2P17156 633 aa12.36□□□□□ -0.43
Usp4-209ENSMUST00000194959 Mcm4P49717 862 aa12.36□□□□□ -0.43
Usp4-209ENSMUST00000194959 Nucb1Q02819 459 aaKnown RBP12.36□□□□□ -0.43
Usp4-209ENSMUST00000194959 CenppQ9CZ92 286 aa12.36□□□□□ -0.43
Usp4-209ENSMUST00000194959 PogkQ80TC5 607 aa12.36□□□□□ -0.43
Usp4-209ENSMUST00000194959 TimelessQ9R1X4 1197 aa12.36□□□□□ -0.43
Usp4-209ENSMUST00000194959 Erc2Q6PH08 957 aa12.35□□□□□ -0.43
Usp4-209ENSMUST00000194959 Slain2Q8CI08 581 aa12.35□□□□□ -0.43
Usp4-209ENSMUST00000194959 Edc3Q8K2D3 508 aaKnown RBP12.35□□□□□ -0.43
Usp4-209ENSMUST00000194959 Sirt1Q923E4 737 aa12.35□□□□□ -0.43
Usp4-209ENSMUST00000194959 Acsbg1Q99PU5 721 aa12.35□□□□□ -0.43
Usp4-209ENSMUST00000194959 Foxp4Q9DBY0 795 aaKnown RBP12.35□□□□□ -0.43
Usp4-209ENSMUST00000194959 Zkscan2G3X952 960 aa12.35□□□□□ -0.43
Usp4-209ENSMUST00000194959 Slc39a6Q8C145 765 aa12.35□□□□□ -0.43
Usp4-209ENSMUST00000194959 F2rP30558 430 aa12.34□□□□□ -0.43
Usp4-209ENSMUST00000194959 Nkx2-3P97334 362 aa12.34□□□□□ -0.43
Usp4-209ENSMUST00000194959 Cnnm1Q0GA42 951 aa12.34□□□□□ -0.43
Usp4-209ENSMUST00000194959 Dixdc1Q80Y83 711 aa12.34□□□□□ -0.43
Usp4-209ENSMUST00000194959 Chmp7Q8R1T1 451 aa12.34□□□□□ -0.43
Usp4-209ENSMUST00000194959 RestQ8VIG1 1082 aa12.34□□□□□ -0.43
Usp4-209ENSMUST00000194959 Tpx2A2APB8 745 aaKnown RBP12.34□□□□□ -0.43
Usp4-209ENSMUST00000194959 Map3k2Q61083 619 aa12.34□□□□□ -0.43
Usp4-209ENSMUST00000194959 Aldh1l2Q8K009 923 aa12.34□□□□□ -0.43
Usp4-209ENSMUST00000194959 Disp3A3KFU9 1347 aa12.34□□□□□ -0.43
Usp4-209ENSMUST00000194959 Mcm2P97310 904 aa12.34□□□□□ -0.43
Usp4-209ENSMUST00000194959 Babam1Q3UI43 333 aa12.34□□□□□ -0.43
Usp4-209ENSMUST00000194959 Antxr1Q9CZ52 562 aa12.34□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 65.3 ms