RNA–Protein interactions for RNA: ENSMUST00000095899.4

Syne1-202, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-202ENSMUST00000095899 Nid2O88322 1403 aa10.27□□□□□ -0.77
Syne1-202ENSMUST00000095899 SkilQ60665 675 aa10.26□□□□□ -0.77
Syne1-202ENSMUST00000095899 Aifm3Q3TY86 605 aa10.26□□□□□ -0.77
Syne1-202ENSMUST00000095899 Nckap5lQ6GQX2 1323 aa10.26□□□□□ -0.77
Syne1-202ENSMUST00000095899 Wwc1Q5SXA9 1104 aa10.25□□□□□ -0.77
Syne1-202ENSMUST00000095899 Nlgn1Q99K10 843 aa10.25□□□□□ -0.77
Syne1-202ENSMUST00000095899 Nup153E9Q3G8 1462 aaKnown RBP10.25□□□□□ -0.77
Syne1-202ENSMUST00000095899 MpripP97434 1024 aa10.24□□□□□ -0.77
Syne1-202ENSMUST00000095899 Trim27Q62158 513 aa10.24□□□□□ -0.77
Syne1-202ENSMUST00000095899 Aldh1l2Q8K009 923 aa10.24□□□□□ -0.77
Syne1-202ENSMUST00000095899 Tnpo1Q8BFY9 898 aaKnown RBP10.24□□□□□ -0.77
Syne1-202ENSMUST00000095899 Usp16Q99LG0 825 aa10.24□□□□□ -0.77
Syne1-202ENSMUST00000095899 Tm6sf1P58749 370 aa10.23□□□□□ -0.77
Syne1-202ENSMUST00000095899 Pnpla7A2AJ88 1352 aa10.23□□□□□ -0.77
Syne1-202ENSMUST00000095899 Rabep1O35551 862 aa10.23□□□□□ -0.77
Syne1-202ENSMUST00000095899 Hsp90ab1P11499 724 aaKnown RBP10.23□□□□□ -0.77
Syne1-202ENSMUST00000095899 Cog6Q8R3I3 657 aa10.23□□□□□ -0.77
Syne1-202ENSMUST00000095899 Wdr63B2RY71 923 aa10.22□□□□□ -0.77
Syne1-202ENSMUST00000095899 Snap23O09044 210 aa10.22□□□□□ -0.77
Syne1-202ENSMUST00000095899 Rapgef3Q8VCC8 918 aa10.22□□□□□ -0.77
Syne1-202ENSMUST00000095899 Ddit3P35639 168 aa10.22□□□□□ -0.77
Syne1-202ENSMUST00000095899 Eya1P97767 591 aa10.22□□□□□ -0.77
Syne1-202ENSMUST00000095899 Igsf1Q7TQA1 1317 aa10.22□□□□□ -0.77
Syne1-202ENSMUST00000095899 Tmco5bQ80X59 307 aa10.21□□□□□ -0.77
Syne1-202ENSMUST00000095899 Slc35g1Q8BY79 368 aa10.21□□□□□ -0.77
Syne1-202ENSMUST00000095899 Senp3Q9EP97 568 aaKnown RBP10.21□□□□□ -0.77
Syne1-202ENSMUST00000095899 Gm6268A2A3U9 297 aa10.21□□□□□ -0.78
Syne1-202ENSMUST00000095899 Prim1P20664 417 aa10.21□□□□□ -0.78
Syne1-202ENSMUST00000095899 Rrp9Q91WM3 475 aaKnown RBP10.21□□□□□ -0.78
Syne1-202ENSMUST00000095899 BccipQ9CWI3 316 aa10.21□□□□□ -0.78
Syne1-202ENSMUST00000095899 Catsper2A2ARP9 588 aa10.2□□□□□ -0.78
Syne1-202ENSMUST00000095899 Cyb5rlB1AS42 316 aa10.2□□□□□ -0.78
Syne1-202ENSMUST00000095899 Ano8Q6PB70 1060 aa10.2□□□□□ -0.78
Syne1-202ENSMUST00000095899 TmpoQ61033 693 aaKnown RBP10.2□□□□□ -0.78
Syne1-202ENSMUST00000095899 Aldh8a1Q8BH00 487 aa10.2□□□□□ -0.78
Syne1-202ENSMUST00000095899 Ncapd2Q8K2Z4 1392 aa10.19□□□□□ -0.78
Syne1-202ENSMUST00000095899 CarsQ9ER72 831 aaKnown RBP10.19□□□□□ -0.78
Syne1-202ENSMUST00000095899 Frmpd2A0A140LI67 1392 aa10.19□□□□□ -0.78
Syne1-202ENSMUST00000095899 Gm10093D3YYI8 482 aa10.19□□□□□ -0.78
Syne1-202ENSMUST00000095899 Hdac1O09106 482 aaKnown RBP10.19□□□□□ -0.78
Syne1-202ENSMUST00000095899 Stk31Q99MW1 1018 aa10.19□□□□□ -0.78
Syne1-202ENSMUST00000095899 Foxp4Q9DBY0 795 aaKnown RBP10.19□□□□□ -0.78
Syne1-202ENSMUST00000095899 AU015836B2RUM3 263 aa10.19□□□□□ -0.78
Syne1-202ENSMUST00000095899 Terf2O35144 541 aa10.19□□□□□ -0.78
Syne1-202ENSMUST00000095899 Rad17Q6NXW6 688 aa10.19□□□□□ -0.78
Syne1-202ENSMUST00000095899 Cyp2d12Q8BVD2 504 aa10.19□□□□□ -0.78
Syne1-202ENSMUST00000095899 Nsfl1cQ9CZ44 370 aaKnown RBP10.19□□□□□ -0.78
Syne1-202ENSMUST00000095899 Marf1Q8BJ34 1730 aaKnown RBP10.18□□□□□ -0.78
Syne1-202ENSMUST00000095899 Gm10563F6WIE4 79 aa10.18□□□□□ -0.78
Syne1-202ENSMUST00000095899 Hoxc9P09633 260 aa10.18□□□□□ -0.78
Syne1-202ENSMUST00000095899 EngaseQ8BX80 734 aa10.18□□□□□ -0.78
Syne1-202ENSMUST00000095899 Tnks1bp1P58871 1720 aa10.18□□□□□ -0.78
Syne1-202ENSMUST00000095899 TimelessQ9R1X4 1197 aa10.18□□□□□ -0.78
Syne1-202ENSMUST00000095899 Nkx2-3P97334 362 aa10.17□□□□□ -0.78
Syne1-202ENSMUST00000095899 Tbc1d9Q3UYK3 1264 aa10.17□□□□□ -0.78
Syne1-202ENSMUST00000095899 Tmem2Q5FWI3 1383 aa10.17□□□□□ -0.78
Syne1-202ENSMUST00000095899 Tmem94Q7TSH8 1360 aa10.17□□□□□ -0.78
Syne1-202ENSMUST00000095899 Fam13aQ8BGI4 693 aa10.17□□□□□ -0.78
Syne1-202ENSMUST00000095899 Dennd6aQ8BH65 605 aa10.17□□□□□ -0.78
Syne1-202ENSMUST00000095899 Ric3Q8BPM6 367 aa10.17□□□□□ -0.78
Syne1-202ENSMUST00000095899 FanclQ9CR14 375 aa10.17□□□□□ -0.78
Syne1-202ENSMUST00000095899 FocadA2AKG8 1798 aa10.17□□□□□ -0.78
Syne1-202ENSMUST00000095899 Abca15E9PWH4 1668 aa10.17□□□□□ -0.78
Syne1-202ENSMUST00000095899 Plin1Q8CGN5 517 aa10.17□□□□□ -0.78
Syne1-202ENSMUST00000095899 Cetn4Q8K4K1 168 aa10.17□□□□□ -0.78
Syne1-202ENSMUST00000095899 Mfap1aC0HKD8 439 aaKnown RBP10.16□□□□□ -0.78
Syne1-202ENSMUST00000095899 Mfap1bC0HKD9 439 aaKnown RBP10.16□□□□□ -0.78
Syne1-202ENSMUST00000095899 Cyp2d11P24457 504 aa10.16□□□□□ -0.78
Syne1-202ENSMUST00000095899 Rangap1P46061 589 aaKnown RBP10.16□□□□□ -0.78
Syne1-202ENSMUST00000095899 Ggnbp2Q5SV77 696 aa10.16□□□□□ -0.78
Syne1-202ENSMUST00000095899 DmtnQ9WV69 405 aa10.16□□□□□ -0.78
Syne1-202ENSMUST00000095899 Rnf123Q5XPI3 1314 aa10.16□□□□□ -0.78
Syne1-202ENSMUST00000095899 Ubr2Q6WKZ8 1755 aa10.15□□□□□ -0.78
Syne1-202ENSMUST00000095899 Atf5O70191 283 aa10.15□□□□□ -0.78
Syne1-202ENSMUST00000095899 Map7O88735 730 aa10.15□□□□□ -0.78
Syne1-202ENSMUST00000095899 U2surpQ6NV83 1029 aaKnown RBP10.15□□□□□ -0.78
Syne1-202ENSMUST00000095899 Rab11fip3Q8CHD8 1047 aa10.15□□□□□ -0.78
Syne1-202ENSMUST00000095899 CenppQ9CZ92 286 aa10.15□□□□□ -0.78
Syne1-202ENSMUST00000095899 Scaf1Q5U4C3 1256 aaKnown RBP10.15□□□□□ -0.78
Syne1-202ENSMUST00000095899 Tjp1P39447 1745 aaKnown RBP10.15□□□□□ -0.78
Syne1-202ENSMUST00000095899 Atg4a-psA0A0G2JFS9 396 aa10.14□□□□□ -0.79
Syne1-202ENSMUST00000095899 Ccne1Q61457 408 aa10.14□□□□□ -0.79
Syne1-202ENSMUST00000095899 Q8BT18 775 aa10.14□□□□□ -0.79
Syne1-202ENSMUST00000095899 Atg4aQ8C9S8 396 aa10.14□□□□□ -0.79
Syne1-202ENSMUST00000095899 Amigo3Q8C2S7 508 aa10.14□□□□□ -0.79
Syne1-202ENSMUST00000095899 Kdm4cQ8VCD7 1054 aa10.14□□□□□ -0.79
Syne1-202ENSMUST00000095899 Pip4k2bQ80XI4 416 aa10.13□□□□□ -0.79
Syne1-202ENSMUST00000095899 Ppp6r3Q922D4 844 aa10.13□□□□□ -0.79
Syne1-202ENSMUST00000095899 Dnttip2Q8R2M2 758 aaKnown RBP10.13□□□□□ -0.79
Syne1-202ENSMUST00000095899 Prkar2bP31324 416 aa10.13□□□□□ -0.79
Syne1-202ENSMUST00000095899 Zfp777B9EKF4 885 aa10.12□□□□□ -0.79
Syne1-202ENSMUST00000095899 Slain2Q8CI08 581 aa10.12□□□□□ -0.79
Syne1-202ENSMUST00000095899 Ncoa4Q5U4H9 625 aa10.12□□□□□ -0.79
Syne1-202ENSMUST00000095899 Tmem132eQ6IEE6 982 aa10.12□□□□□ -0.79
Syne1-202ENSMUST00000095899 DccP70211 1447 aa10.12□□□□□ -0.79
Syne1-202ENSMUST00000095899 Fam83gQ5SWY7 812 aa10.11□□□□□ -0.79
Syne1-202ENSMUST00000095899 Tfip11Q9ERA6 838 aaKnown RBP10.11□□□□□ -0.79
Syne1-202ENSMUST00000095899 Disp3A3KFU9 1347 aa10.11□□□□□ -0.79
Syne1-202ENSMUST00000095899 Anapc15-psA0A140T8L6 141 aa10.11□□□□□ -0.79
Syne1-202ENSMUST00000095899 Rtn4Q99P72 1162 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 64.5 ms