RNA–Protein interactions for RNA: ENSMUST00000028580.11

Ccdc34-201, Transcript of Coiled-coil domain-containing protein 34, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc34, Length 2,070 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc34-201ENSMUST00000028580 Rad17Q6NXW6 688 aa24.55■■□□□ 1.52
Ccdc34-201ENSMUST00000028580 Ptpn23Q6PB44 1692 aa24.55■■□□□ 1.52
Ccdc34-201ENSMUST00000028580 Dnajc5P60904 198 aa24.55■■□□□ 1.52
Ccdc34-201ENSMUST00000028580 Fam13aQ8BGI4 693 aa24.55■■□□□ 1.52
Ccdc34-201ENSMUST00000028580 Aifm3Q3TY86 605 aa24.54■■□□□ 1.52
Ccdc34-201ENSMUST00000028580 Camta1A2A891 1682 aa24.54■■□□□ 1.52
Ccdc34-201ENSMUST00000028580 Als2Q920R0 1651 aa24.54■■□□□ 1.52
Ccdc34-201ENSMUST00000028580 GphnQ8BUV3 769 aaKnown RBP24.54■■□□□ 1.52
Ccdc34-201ENSMUST00000028580 Frmpd2A0A140LI67 1392 aa24.53■■□□□ 1.52
Ccdc34-201ENSMUST00000028580 C5P06684 1680 aa24.53■■□□□ 1.52
Ccdc34-201ENSMUST00000028580 Igsf1Q7TQA1 1317 aa24.53■■□□□ 1.52
Ccdc34-201ENSMUST00000028580 Triml2E9PW10 424 aa24.52■■□□□ 1.52
Ccdc34-201ENSMUST00000028580 Topaz1E5FYH1 1653 aa24.51■■□□□ 1.51
Ccdc34-201ENSMUST00000028580 Rsph3aQ3UFY4 516 aa24.51■■□□□ 1.51
Ccdc34-201ENSMUST00000028580 FanclQ9CR14 375 aa24.51■■□□□ 1.51
Ccdc34-201ENSMUST00000028580 Scaf1Q5U4C3 1256 aaKnown RBP24.5■■□□□ 1.51
Ccdc34-201ENSMUST00000028580 Nsfl1cQ9CZ44 370 aaKnown RBP24.5■■□□□ 1.51
Ccdc34-201ENSMUST00000028580 Tfip11Q9ERA6 838 aaKnown RBP24.5■■□□□ 1.51
Ccdc34-201ENSMUST00000028580 FancaQ9JL70 1439 aa24.49■■□□□ 1.51
Ccdc34-201ENSMUST00000028580 Mcm4P49717 862 aa24.49■■□□□ 1.51
Ccdc34-201ENSMUST00000028580 Ssh1Q76I79 1042 aa24.49■■□□□ 1.51
Ccdc34-201ENSMUST00000028580 1700010I14RikQ7TPG0 532 aa24.49■■□□□ 1.51
Ccdc34-201ENSMUST00000028580 Map2P20357 1828 aa24.49■■□□□ 1.51
Ccdc34-201ENSMUST00000028580 Msh6P54276 1358 aaKnown RBP24.49■■□□□ 1.51
Ccdc34-201ENSMUST00000028580 Ddit3P35639 168 aa24.49■■□□□ 1.51
Ccdc34-201ENSMUST00000028580 Prkar2bP31324 416 aa24.48■■□□□ 1.51
Ccdc34-201ENSMUST00000028580 Dennd6aQ8BH65 605 aa24.48■■□□□ 1.51
Ccdc34-201ENSMUST00000028580 Nlgn1Q99K10 843 aa24.48■■□□□ 1.51
Ccdc34-201ENSMUST00000028580 Rtf1A2AQ19 715 aaKnown RBP24.47■■□□□ 1.51
Ccdc34-201ENSMUST00000028580 Ccdc146E9Q9F7 977 aa24.47■■□□□ 1.51
Ccdc34-201ENSMUST00000028580 PtprvP70289 1705 aa24.47■■□□□ 1.51
Ccdc34-201ENSMUST00000028580 Idi1P58044 227 aa24.46■■□□□ 1.51
Ccdc34-201ENSMUST00000028580 Eya1P97767 591 aa24.46■■□□□ 1.51
Ccdc34-201ENSMUST00000028580 Ggnbp2Q5SV77 696 aa24.46■■□□□ 1.51
Ccdc34-201ENSMUST00000028580 MyclP10166 368 aa24.46■■□□□ 1.51
Ccdc34-201ENSMUST00000028580 Ppp6r3Q922D4 844 aa24.46■■□□□ 1.51
Ccdc34-201ENSMUST00000028580 1700019A02RikA0A087WPV9 146 aa24.45■■□□□ 1.5
Ccdc34-201ENSMUST00000028580 EngaseQ8BX80 734 aa24.45■■□□□ 1.5
Ccdc34-201ENSMUST00000028580 Rfx1P48377 963 aa24.44■■□□□ 1.5
Ccdc34-201ENSMUST00000028580 Nucb1Q02819 459 aaKnown RBP24.44■■□□□ 1.5
Ccdc34-201ENSMUST00000028580 GorabQ8BRM2 368 aa24.44■■□□□ 1.5
Ccdc34-201ENSMUST00000028580 Prim1P20664 417 aa24.44■■□□□ 1.5
Ccdc34-201ENSMUST00000028580 Fgd1P52734 960 aa24.44■■□□□ 1.5
Ccdc34-201ENSMUST00000028580 NgefQ8CHT1 710 aa24.44■■□□□ 1.5
Ccdc34-201ENSMUST00000028580 ScaperF8VQ70 1398 aaKnown RBP24.43■■□□□ 1.5
Ccdc34-201ENSMUST00000028580 Ppip5k2Q6ZQB6 1129 aa24.43■■□□□ 1.5
Ccdc34-201ENSMUST00000028580 Sv2bQ8BG39 683 aa24.43■■□□□ 1.5
Ccdc34-201ENSMUST00000028580 Alpk3Q924C5 1678 aa24.43■■□□□ 1.5
Ccdc34-201ENSMUST00000028580 Elp1Q7TT37 1333 aaKnown RBP24.42■■□□□ 1.5
Ccdc34-201ENSMUST00000028580 Pdia3P27773 505 aaKnown RBP24.42■■□□□ 1.5
Ccdc34-201ENSMUST00000028580 Parp14Q2EMV9 1817 aa24.42■■□□□ 1.5
Ccdc34-201ENSMUST00000028580 Foxp4Q9DBY0 795 aaKnown RBP24.41■■□□□ 1.5
Ccdc34-201ENSMUST00000028580 Atg4a-psA0A0G2JFS9 396 aa24.41■■□□□ 1.5
Ccdc34-201ENSMUST00000028580 Atg4aQ8C9S8 396 aa24.41■■□□□ 1.5
Ccdc34-201ENSMUST00000028580 Rnf123Q5XPI3 1314 aa24.4■■□□□ 1.5
Ccdc34-201ENSMUST00000028580 Isy1Q69ZQ2 285 aaKnown RBP24.39■■□□□ 1.5
Ccdc34-201ENSMUST00000028580 Cabp4Q8VHC5 271 aa24.39■■□□□ 1.5
Ccdc34-201ENSMUST00000028580 Gm21190A0A0G2JGJ6 266 aa24.38■■□□□ 1.49
Ccdc34-201ENSMUST00000028580 Pibf1E9Q6K3 756 aa24.38■■□□□ 1.49
Ccdc34-201ENSMUST00000028580 Ano8Q6PB70 1060 aa24.38■■□□□ 1.49
Ccdc34-201ENSMUST00000028580 Hoxc9P09633 260 aa24.37■■□□□ 1.49
Ccdc34-201ENSMUST00000028580 Smarca5Q91ZW3 1051 aaKnown RBP24.37■■□□□ 1.49
Ccdc34-201ENSMUST00000028580 Ap3b2Q9JME5 1082 aa24.37■■□□□ 1.49
Ccdc34-201ENSMUST00000028580 Cyp46a1Q9WVK8 500 aa24.37■■□□□ 1.49
Ccdc34-201ENSMUST00000028580 Gm10563F6WIE4 79 aa24.36■■□□□ 1.49
Ccdc34-201ENSMUST00000028580 Rimbp3Q3V0F0 1606 aa24.36■■□□□ 1.49
Ccdc34-201ENSMUST00000028580 Nckap5lQ6GQX2 1323 aa24.36■■□□□ 1.49
Ccdc34-201ENSMUST00000028580 Snap23O09044 210 aa24.35■■□□□ 1.49
Ccdc34-201ENSMUST00000028580 HypkQ9CR41 129 aa24.35■■□□□ 1.49
Ccdc34-201ENSMUST00000028580 Atf5O70191 283 aa24.34■■□□□ 1.49
Ccdc34-201ENSMUST00000028580 Gnai2P08752 355 aaKnown RBP24.34■■□□□ 1.49
Ccdc34-201ENSMUST00000028580 Sox12Q04890 314 aa24.34■■□□□ 1.49
Ccdc34-201ENSMUST00000028580 Ccne1Q61457 408 aa24.34■■□□□ 1.49
Ccdc34-201ENSMUST00000028580 Plcb2A3KGF7 1181 aa24.34■■□□□ 1.49
Ccdc34-201ENSMUST00000028580 Casq1O09165 405 aa24.34■■□□□ 1.49
Ccdc34-201ENSMUST00000028580 Hoxa7P02830 229 aa24.34■■□□□ 1.49
Ccdc34-201ENSMUST00000028580 Spryd3E9Q9B3 442 aa24.33■■□□□ 1.49
Ccdc34-201ENSMUST00000028580 Ahnak2E9PYB0 1738 aaKnown RBP24.33■■□□□ 1.49
Ccdc34-201ENSMUST00000028580 Fam83gQ5SWY7 812 aa24.33■■□□□ 1.48
Ccdc34-201ENSMUST00000028580 Phf14Q9D4H9 881 aa24.33■■□□□ 1.48
Ccdc34-201ENSMUST00000028580 Stk36Q69ZM6 1316 aa24.32■■□□□ 1.48
Ccdc34-201ENSMUST00000028580 Pnpla7A2AJ88 1352 aa24.31■■□□□ 1.48
Ccdc34-201ENSMUST00000028580 Thsd7aQ69ZU6 1645 aa24.3■■□□□ 1.48
Ccdc34-201ENSMUST00000028580 Q3TQI7 289 aaKnown RBP24.3■■□□□ 1.48
Ccdc34-201ENSMUST00000028580 Arfgef2A2A5R2 1792 aa24.3■■□□□ 1.48
Ccdc34-201ENSMUST00000028580 Dnttip2Q8R2M2 758 aaKnown RBP24.3■■□□□ 1.48
Ccdc34-201ENSMUST00000028580 Nphp1Q9QY53 687 aa24.3■■□□□ 1.48
Ccdc34-201ENSMUST00000028580 Kif20aP97329 887 aa24.29■■□□□ 1.48
Ccdc34-201ENSMUST00000028580 Gsdma3Q5Y4Y6 464 aa24.28■■□□□ 1.48
Ccdc34-201ENSMUST00000028580 Mrps27Q8BK72 415 aaKnown RBP24.28■■□□□ 1.48
Ccdc34-201ENSMUST00000028580 Plcd4Q8K3R3 807 aa24.28■■□□□ 1.48
Ccdc34-201ENSMUST00000028580 Zkscan2G3X952 960 aa24.28■■□□□ 1.48
Ccdc34-201ENSMUST00000028580 Mmp8O70138 465 aa24.28■■□□□ 1.48
Ccdc34-201ENSMUST00000028580 Erc2Q6PH08 957 aa24.28■■□□□ 1.48
Ccdc34-201ENSMUST00000028580 Unc13bQ9Z1N9 1602 aa24.27■■□□□ 1.48
Ccdc34-201ENSMUST00000028580 Nup153E9Q3G8 1462 aaKnown RBP24.27■■□□□ 1.48
Ccdc34-201ENSMUST00000028580 Col14a1Q80X19 1797 aa24.27■■□□□ 1.48
Ccdc34-201ENSMUST00000028580 Atp8b2P98199 1209 aa24.26■■□□□ 1.47
Ccdc34-201ENSMUST00000028580 MlecQ6ZQI3 291 aaKnown RBP24.26■■□□□ 1.47
Ccdc34-201ENSMUST00000028580 Srgap3Q812A2 1099 aa24.26■■□□□ 1.47
Retrieved 100 of 22,080 RNA–protein pairs in 13.9 ms