RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Pdia3P27773 505 aaKnown RBP22.8■■□□□ 1.24
Ccdc3-201ENSMUST00000027988 Aldh1l2Q8K009 923 aa22.8■■□□□ 1.24
Ccdc3-201ENSMUST00000027988 Ppip5k2Q6ZQB6 1129 aa22.79■■□□□ 1.24
Ccdc3-201ENSMUST00000027988 Bloc1s4Q8VED2 215 aa22.79■■□□□ 1.24
Ccdc3-201ENSMUST00000027988 Atg4a-psA0A0G2JFS9 396 aa22.79■■□□□ 1.24
Ccdc3-201ENSMUST00000027988 DekQ7TNV0 380 aaKnown RBP22.79■■□□□ 1.24
Ccdc3-201ENSMUST00000027988 Atg4aQ8C9S8 396 aa22.79■■□□□ 1.24
Ccdc3-201ENSMUST00000027988 Nckap5lQ6GQX2 1323 aa22.78■■□□□ 1.24
Ccdc3-201ENSMUST00000027988 Nucb1Q02819 459 aaKnown RBP22.77■■□□□ 1.24
Ccdc3-201ENSMUST00000027988 Sox12Q04890 314 aa22.77■■□□□ 1.24
Ccdc3-201ENSMUST00000027988 Cgnl1Q6AW69 1298 aa22.77■■□□□ 1.24
Ccdc3-201ENSMUST00000027988 HnrnpuQ8VEK3 800 aaKnown RBP22.77■■□□□ 1.24
Ccdc3-201ENSMUST00000027988 Vsig10D3YX43 558 aa22.76■■□□□ 1.23
Ccdc3-201ENSMUST00000027988 Q3UJC8 639 aa22.76■■□□□ 1.23
Ccdc3-201ENSMUST00000027988 Gcc1Q9D4H2 778 aa22.76■■□□□ 1.23
Ccdc3-201ENSMUST00000027988 N4bp2F8VQG7 1678 aaKnown RBP22.75■■□□□ 1.23
Ccdc3-201ENSMUST00000027988 Astn2Q80Z10 1352 aa22.75■■□□□ 1.23
Ccdc3-201ENSMUST00000027988 Chd2E9PZM4 1827 aaKnown RBP22.75■■□□□ 1.23
Ccdc3-201ENSMUST00000027988 Slit3Q9WVB4 1523 aa22.75■■□□□ 1.23
Ccdc3-201ENSMUST00000027988 Anapc15-psA0A140T8L6 141 aa22.75■■□□□ 1.23
Ccdc3-201ENSMUST00000027988 Fam83gQ5SWY7 812 aa22.75■■□□□ 1.23
Ccdc3-201ENSMUST00000027988 Camta1A2A891 1682 aa22.74■■□□□ 1.23
Ccdc3-201ENSMUST00000027988 NalcnQ8BXR5 1738 aa22.74■■□□□ 1.23
Ccdc3-201ENSMUST00000027988 AU015836B2RUM3 263 aa22.74■■□□□ 1.23
Ccdc3-201ENSMUST00000027988 Pik3c2aQ61194 1686 aa22.73■■□□□ 1.23
Ccdc3-201ENSMUST00000027988 Phf14Q9D4H9 881 aa22.73■■□□□ 1.23
Ccdc3-201ENSMUST00000027988 Bcar3Q9QZK2 820 aa22.73■■□□□ 1.23
Ccdc3-201ENSMUST00000027988 FancaQ9JL70 1439 aa22.72■■□□□ 1.23
Ccdc3-201ENSMUST00000027988 Map2P20357 1828 aa22.72■■□□□ 1.23
Ccdc3-201ENSMUST00000027988 Ubr1O70481 1757 aa22.72■■□□□ 1.23
Ccdc3-201ENSMUST00000027988 SlkO54988 1233 aa22.72■■□□□ 1.23
Ccdc3-201ENSMUST00000027988 Prune1Q8BIW1 454 aa22.72■■□□□ 1.23
Ccdc3-201ENSMUST00000027988 Larp1bA0A0A6YXJ7 370 aaKnown RBP22.71■■□□□ 1.23
Ccdc3-201ENSMUST00000027988 Eya1P97767 591 aa22.71■■□□□ 1.23
Ccdc3-201ENSMUST00000027988 1700010I14RikQ7TPG0 532 aa22.71■■□□□ 1.23
Ccdc3-201ENSMUST00000027988 Idi1P58044 227 aa22.7■■□□□ 1.22
Ccdc3-201ENSMUST00000027988 Plppr3Q7TPB0 716 aa22.7■■□□□ 1.22
Ccdc3-201ENSMUST00000027988 Bag4Q8CI61 457 aa22.7■■□□□ 1.22
Ccdc3-201ENSMUST00000027988 Q9D2X8 372 aa22.7■■□□□ 1.22
Ccdc3-201ENSMUST00000027988 4933402E13RikQ9D4D2 429 aa22.7■■□□□ 1.22
Ccdc3-201ENSMUST00000027988 PzpQ61838 1495 aa22.69■■□□□ 1.22
Ccdc3-201ENSMUST00000027988 Casq1O09165 405 aa22.69■■□□□ 1.22
Ccdc3-201ENSMUST00000027988 Sv2bQ8BG39 683 aa22.69■■□□□ 1.22
Ccdc3-201ENSMUST00000027988 Cyp46a1Q9WVK8 500 aa22.69■■□□□ 1.22
Ccdc3-201ENSMUST00000027988 Rasa1E9PYG6 1038 aa22.68■■□□□ 1.22
Ccdc3-201ENSMUST00000027988 Ccne1Q61457 408 aa22.67■■□□□ 1.22
Ccdc3-201ENSMUST00000027988 Nlgn1Q99K10 843 aa22.67■■□□□ 1.22
Ccdc3-201ENSMUST00000027988 Cyp27a1Q9DBG1 533 aa22.67■■□□□ 1.22
Ccdc3-201ENSMUST00000027988 Msh6P54276 1358 aaKnown RBP22.67■■□□□ 1.22
Ccdc3-201ENSMUST00000027988 CemipQ8BI06 1361 aa22.67■■□□□ 1.22
Ccdc3-201ENSMUST00000027988 Cdk12Q14AX6 1484 aaKnown RBP22.66■■□□□ 1.22
Ccdc3-201ENSMUST00000027988 Mcm2P97310 904 aa22.66■■□□□ 1.22
Ccdc3-201ENSMUST00000027988 Paxip1Q6NZQ4 1056 aa22.66■■□□□ 1.22
Ccdc3-201ENSMUST00000027988 Cabp4Q8VHC5 271 aa22.66■■□□□ 1.22
Ccdc3-201ENSMUST00000027988 Chmp4cQ9D7F7 232 aa22.66■■□□□ 1.22
Ccdc3-201ENSMUST00000027988 Rreb1Q3UH06 1700 aaKnown RBP22.65■■□□□ 1.22
Ccdc3-201ENSMUST00000027988 Rtf1A2AQ19 715 aaKnown RBP22.65■■□□□ 1.22
Ccdc3-201ENSMUST00000027988 Zdhhc9P59268 364 aa22.65■■□□□ 1.22
Ccdc3-201ENSMUST00000027988 Dennd6aQ8BH65 605 aa22.65■■□□□ 1.22
Ccdc3-201ENSMUST00000027988 Cyp2d12Q8BVD2 504 aa22.64■■□□□ 1.21
Ccdc3-201ENSMUST00000027988 Pdcl3Q8BVF2 240 aa22.64■■□□□ 1.21
Ccdc3-201ENSMUST00000027988 Sirt1Q923E4 737 aa22.64■■□□□ 1.21
Ccdc3-201ENSMUST00000027988 Gdpd2Q9ESM6 539 aa22.64■■□□□ 1.21
Ccdc3-201ENSMUST00000027988 Abcc10Q8R4P9 1501 aa22.63■■□□□ 1.21
Ccdc3-201ENSMUST00000027988 Gm21190A0A0G2JGJ6 266 aa22.63■■□□□ 1.21
Ccdc3-201ENSMUST00000027988 Zkscan16A2ALW2 728 aa22.63■■□□□ 1.21
Ccdc3-201ENSMUST00000027988 Srgap3Q812A2 1099 aa22.63■■□□□ 1.21
Ccdc3-201ENSMUST00000027988 Slit2Q9R1B9 1521 aa22.62■■□□□ 1.21
Ccdc3-201ENSMUST00000027988 Tmx3Q8BXZ1 456 aa22.62■■□□□ 1.21
Ccdc3-201ENSMUST00000027988 Col16a1Q8BLX7 1580 aa22.62■■□□□ 1.21
Ccdc3-201ENSMUST00000027988 Kif20aP97329 887 aa22.62■■□□□ 1.21
Ccdc3-201ENSMUST00000027988 Ppp1r42Q8R1Z4 357 aa22.62■■□□□ 1.21
Ccdc3-201ENSMUST00000027988 RestQ8VIG1 1082 aa22.62■■□□□ 1.21
Ccdc3-201ENSMUST00000027988 Elp1Q7TT37 1333 aaKnown RBP22.61■■□□□ 1.21
Ccdc3-201ENSMUST00000027988 Tnnt1O88346 262 aa22.61■■□□□ 1.21
Ccdc3-201ENSMUST00000027988 PtprvP70289 1705 aa22.61■■□□□ 1.21
Ccdc3-201ENSMUST00000027988 Znf335A2A5K6 1337 aa22.6■■□□□ 1.21
Ccdc3-201ENSMUST00000027988 Znf692Q3U381 531 aa22.6■■□□□ 1.21
Ccdc3-201ENSMUST00000027988 Tmem132eQ6IEE6 982 aa22.6■■□□□ 1.21
Ccdc3-201ENSMUST00000027988 Q3TQI7 289 aaKnown RBP22.59■■□□□ 1.21
Ccdc3-201ENSMUST00000027988 Hmox1P14901 289 aa22.58■■□□□ 1.21
Ccdc3-201ENSMUST00000027988 Erc2Q6PH08 957 aa22.58■■□□□ 1.21
Ccdc3-201ENSMUST00000027988 Zkscan1Q8BGS3 561 aaKnown RBP22.58■■□□□ 1.21
Ccdc3-201ENSMUST00000027988 Adamtsl3G3UXC7 1706 aa22.58■■□□□ 1.21
Ccdc3-201ENSMUST00000027988 Gnai2P08752 355 aaKnown RBP22.58■■□□□ 1.2
Ccdc3-201ENSMUST00000027988 Slc35g1Q8BY79 368 aa22.58■■□□□ 1.2
Ccdc3-201ENSMUST00000027988 Tshz3Q8CGV9 1081 aa22.58■■□□□ 1.2
Ccdc3-201ENSMUST00000027988 Foxp4Q9DBY0 795 aaKnown RBP22.58■■□□□ 1.2
Ccdc3-201ENSMUST00000027988 Irx6Q9ER75 438 aa22.58■■□□□ 1.2
Ccdc3-201ENSMUST00000027988 Ahnak2E9PYB0 1738 aaKnown RBP22.58■■□□□ 1.2
Ccdc3-201ENSMUST00000027988 Scn7aB1AYL1 1681 aa22.57■■□□□ 1.2
Ccdc3-201ENSMUST00000027988 Cyp2d11P24457 504 aa22.57■■□□□ 1.2
Ccdc3-201ENSMUST00000027988 Nphp1Q9QY53 687 aa22.57■■□□□ 1.2
Ccdc3-201ENSMUST00000027988 D430041D05RikF6ZGR6 1678 aa22.56■■□□□ 1.2
Ccdc3-201ENSMUST00000027988 Frmpd2A0A140LI67 1392 aa22.56■■□□□ 1.2
Ccdc3-201ENSMUST00000027988 Mmp8O70138 465 aa22.56■■□□□ 1.2
Ccdc3-201ENSMUST00000027988 Chpf2Q3UU43 768 aa22.56■■□□□ 1.2
Ccdc3-201ENSMUST00000027988 Ptpdc1Q6NZK8 747 aa22.56■■□□□ 1.2
Ccdc3-201ENSMUST00000027988 Gm9992B2RWK3 458 aa22.55■■□□□ 1.2
Ccdc3-201ENSMUST00000027988 Unc93aQ710D3 458 aa22.55■■□□□ 1.2
Retrieved 100 of 22,080 RNA–protein pairs in 93 ms