RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 Dbr1Q923B1 550 aa25.91■■□□□ 1.74
Trim47-201ENSMUST00000021120 Znf526Q8BI66 675 aa25.9■■□□□ 1.74
Trim47-201ENSMUST00000021120 CrklP47941 303 aa25.89■■□□□ 1.74
Trim47-201ENSMUST00000021120 Gsdma3Q5Y4Y6 464 aa25.89■■□□□ 1.74
Trim47-201ENSMUST00000021120 HypkQ9CR41 129 aa25.89■■□□□ 1.74
Trim47-201ENSMUST00000021120 TmpoQ61033 693 aaKnown RBP25.88■■□□□ 1.73
Trim47-201ENSMUST00000021120 Arfgef2A2A5R2 1792 aa25.88■■□□□ 1.73
Trim47-201ENSMUST00000021120 Trpm3Q5F4S9 1721 aa25.87■■□□□ 1.73
Trim47-201ENSMUST00000021120 FocadA2AKG8 1798 aa25.87■■□□□ 1.73
Trim47-201ENSMUST00000021120 Col15a1O35206 1367 aa25.85■■□□□ 1.73
Trim47-201ENSMUST00000021120 Pdcl3Q8BVF2 240 aa25.85■■□□□ 1.73
Trim47-201ENSMUST00000021120 Ddx54Q8K4L0 874 aaKnown RBP25.85■■□□□ 1.73
Trim47-201ENSMUST00000021120 Simc1E9Q6E9 1354 aa25.85■■□□□ 1.73
Trim47-201ENSMUST00000021120 Ahnak2E9PYB0 1738 aaKnown RBP25.84■■□□□ 1.73
Trim47-201ENSMUST00000021120 Larp1bA0A0A6YXJ7 370 aaKnown RBP25.84■■□□□ 1.73
Trim47-201ENSMUST00000021120 Gm10471E9Q1C7 252 aa25.84■■□□□ 1.73
Trim47-201ENSMUST00000021120 Bcl2l12Q9D3J3 255 aa25.84■■□□□ 1.73
Trim47-201ENSMUST00000021120 Arhgef1Q61210 920 aaKnown RBP25.84■■□□□ 1.73
Trim47-201ENSMUST00000021120 Slc5a4bQ91ZP4 660 aa25.84■■□□□ 1.73
Trim47-201ENSMUST00000021120 Slit1Q80TR4 1531 aa25.83■■□□□ 1.73
Trim47-201ENSMUST00000021120 Slx1bQ8BX32 270 aa25.83■■□□□ 1.72
Trim47-201ENSMUST00000021120 Ppp1r37Q8BKR5 712 aa25.82■■□□□ 1.72
Trim47-201ENSMUST00000021120 Lrrc59Q922Q8 307 aaKnown RBP25.82■■□□□ 1.72
Trim47-201ENSMUST00000021120 RgmbQ7TQ33 436 aa25.82■■□□□ 1.72
Trim47-201ENSMUST00000021120 Ipo8Q7TMY7 1010 aa25.81■■□□□ 1.72
Trim47-201ENSMUST00000021120 Ksr2Q3UVC0 959 aa25.79■■□□□ 1.72
Trim47-201ENSMUST00000021120 Gas2l2Q5SSG4 860 aa25.79■■□□□ 1.72
Trim47-201ENSMUST00000021120 Rtf1A2AQ19 715 aaKnown RBP25.79■■□□□ 1.72
Trim47-201ENSMUST00000021120 Zranb3Q6NZP1 1069 aa25.79■■□□□ 1.72
Trim47-201ENSMUST00000021120 Amotl1Q9D4H4 968 aa25.79■■□□□ 1.72
Trim47-201ENSMUST00000021120 Ankrd50F7BE84 1390 aa25.78■■□□□ 1.72
Trim47-201ENSMUST00000021120 Plekhd1B2RPU2 505 aa25.78■■□□□ 1.72
Trim47-201ENSMUST00000021120 Znf521Q6KAS7 1311 aa25.77■■□□□ 1.72
Trim47-201ENSMUST00000021120 Pard3Q99NH2 1333 aa25.77■■□□□ 1.72
Trim47-201ENSMUST00000021120 Ttc21aQ8C0S4 1314 aa25.77■■□□□ 1.72
Trim47-201ENSMUST00000021120 Ppp1r9bQ6R891 817 aaKnown RBP25.76■■□□□ 1.71
Trim47-201ENSMUST00000021120 Ak7Q9D2H2 614 aa25.76■■□□□ 1.71
Trim47-201ENSMUST00000021120 Apbb1Q9QXJ1 710 aa25.76■■□□□ 1.71
Trim47-201ENSMUST00000021120 Ggt6Q6PDE7 497 aa25.75■■□□□ 1.71
Trim47-201ENSMUST00000021120 Gnai1B2RSH2 354 aa25.74■■□□□ 1.71
Trim47-201ENSMUST00000021120 Gnai3Q9DC51 354 aa25.74■■□□□ 1.71
Trim47-201ENSMUST00000021120 Rbm25B2RY56 838 aaKnown RBP25.73■■□□□ 1.71
Trim47-201ENSMUST00000021120 Eif2s2Q99L45 331 aaKnown RBP25.73■■□□□ 1.71
Trim47-201ENSMUST00000021120 Ccar1Q8CH18 1146 aaKnown RBP25.73■■□□□ 1.71
Trim47-201ENSMUST00000021120 Cdc37l1Q9CZP7 335 aa25.73■■□□□ 1.71
Trim47-201ENSMUST00000021120 Zpr1Q62384 459 aa25.72■■□□□ 1.71
Trim47-201ENSMUST00000021120 Ccdc183A2AJB1 534 aa25.71■■□□□ 1.71
Trim47-201ENSMUST00000021120 Gtf2a1Q99PM3 378 aa25.71■■□□□ 1.71
Trim47-201ENSMUST00000021120 AampJ3QN89 436 aa25.71■■□□□ 1.71
Trim47-201ENSMUST00000021120 Snap23O09044 210 aa25.71■■□□□ 1.71
Trim47-201ENSMUST00000021120 Tspyl2Q7TQI8 677 aa25.71■■□□□ 1.71
Trim47-201ENSMUST00000021120 ThemisQ8BGW0 636 aa25.71■■□□□ 1.71
Trim47-201ENSMUST00000021120 Nup153E9Q3G8 1462 aaKnown RBP25.7■■□□□ 1.71
Trim47-201ENSMUST00000021120 Trim30dE9PWL0 497 aa25.69■■□□□ 1.7
Trim47-201ENSMUST00000021120 Zeb2Q9R0G7 1215 aa25.69■■□□□ 1.7
Trim47-201ENSMUST00000021120 Cc2d1aQ8K1A6 943 aa25.68■■□□□ 1.7
Trim47-201ENSMUST00000021120 Tnks1bp1P58871 1720 aa25.68■■□□□ 1.7
Trim47-201ENSMUST00000021120 Hsp90ab1P11499 724 aaKnown RBP25.68■■□□□ 1.7
Trim47-201ENSMUST00000021120 Polr3glQ8R0C0 218 aa25.68■■□□□ 1.7
Trim47-201ENSMUST00000021120 Trim26Q99PN3 545 aa25.68■■□□□ 1.7
Trim47-201ENSMUST00000021120 Sos1Q62245 1319 aa25.66■■□□□ 1.7
Trim47-201ENSMUST00000021120 U2surpQ6NV83 1029 aaKnown RBP25.65■■□□□ 1.7
Trim47-201ENSMUST00000021120 Fam50bQ9WTJ8 334 aa25.65■■□□□ 1.7
Trim47-201ENSMUST00000021120 CastP51125 788 aa25.65■■□□□ 1.7
Trim47-201ENSMUST00000021120 4930572O03RikQ8C5Y0 211 aa25.65■■□□□ 1.7
Trim47-201ENSMUST00000021120 Adgrb1Q3UHD1 1582 aa25.64■■□□□ 1.7
Trim47-201ENSMUST00000021120 Myo5bP21271 1818 aa25.64■■□□□ 1.69
Trim47-201ENSMUST00000021120 Aox2Q5SGK3 1345 aa25.64■■□□□ 1.69
Trim47-201ENSMUST00000021120 Ggnbp2Q5SV77 696 aa25.63■■□□□ 1.69
Trim47-201ENSMUST00000021120 Klhdc4Q921I2 584 aa25.63■■□□□ 1.69
Trim47-201ENSMUST00000021120 Usp16Q99LG0 825 aa25.63■■□□□ 1.69
Trim47-201ENSMUST00000021120 Senp3Q9EP97 568 aaKnown RBP25.63■■□□□ 1.69
Trim47-201ENSMUST00000021120 Akap11E9Q777 1895 aa25.62■■□□□ 1.69
Trim47-201ENSMUST00000021120 Abcc12Q80WJ6 1366 aa25.62■■□□□ 1.69
Trim47-201ENSMUST00000021120 Trim58Q5NCC9 485 aa25.61■■□□□ 1.69
Trim47-201ENSMUST00000021120 Htatsf1Q8BGC0 757 aa25.61■■□□□ 1.69
Trim47-201ENSMUST00000021120 Tns2Q8CGB6 1400 aa25.61■■□□□ 1.69
Trim47-201ENSMUST00000021120 Prim1P20664 417 aa25.6■■□□□ 1.69
Trim47-201ENSMUST00000021120 4930567H17RikQ3V0K5 233 aa25.59■■□□□ 1.69
Trim47-201ENSMUST00000021120 Pank1Q8K4K6 548 aa25.59■■□□□ 1.69
Trim47-201ENSMUST00000021120 Ccdc171E9Q1U1 1324 aa25.59■■□□□ 1.69
Trim47-201ENSMUST00000021120 Speer4bQ9D9F7 267 aa25.57■■□□□ 1.68
Trim47-201ENSMUST00000021120 Rlbp1Q9Z275 317 aa25.57■■□□□ 1.68
Trim47-201ENSMUST00000021120 Nyap1Q6PFX7 833 aa25.57■■□□□ 1.68
Trim47-201ENSMUST00000021120 Ccdc60Q8C4J0 545 aa25.57■■□□□ 1.68
Trim47-201ENSMUST00000021120 Chmp7Q8R1T1 451 aa25.57■■□□□ 1.68
Trim47-201ENSMUST00000021120 Duxf3A0A0N4SV92 674 aa25.56■■□□□ 1.68
Trim47-201ENSMUST00000021120 Pdzd9Q9D9M4 266 aa25.56■■□□□ 1.68
Trim47-201ENSMUST00000021120 Phkg2Q9DB30 406 aa25.56■■□□□ 1.68
Trim47-201ENSMUST00000021120 Kat6bQ8BRB7 1872 aa25.56■■□□□ 1.68
Trim47-201ENSMUST00000021120 Nhsl1Q8CAF4 1587 aa25.56■■□□□ 1.68
Trim47-201ENSMUST00000021120 1700019A02RikA0A087WPV9 146 aa25.55■■□□□ 1.68
Trim47-201ENSMUST00000021120 Gm6268A2A3U9 297 aa25.55■■□□□ 1.68
Trim47-201ENSMUST00000021120 Emilin2Q8K482 1074 aa25.55■■□□□ 1.68
Trim47-201ENSMUST00000021120 Pibf1E9Q6K3 756 aa25.54■■□□□ 1.68
Trim47-201ENSMUST00000021120 Rrp9Q91WM3 475 aaKnown RBP25.54■■□□□ 1.68
Trim47-201ENSMUST00000021120 Eif3bQ8JZQ9 803 aaKnown RBP25.53■■□□□ 1.68
Trim47-201ENSMUST00000021120 Psrc1Q9D0P7 329 aa25.53■■□□□ 1.68
Trim47-201ENSMUST00000021120 Gm21680A0A0G2JGR8 267 aa25.53■■□□□ 1.68
Trim47-201ENSMUST00000021120 Sema6bO54951 886 aa25.53■■□□□ 1.68
Retrieved 100 of 22,080 RNA–protein pairs in 107.6 ms