RNA–Protein interactions for RNA: ENSMUST00000018744.14

Shmt1-201, Transcript of Serine hydroxymethyltransferase, cytosolic, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shmt1, Length 2,858 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1-201ENSMUST00000018744 Q3UJC8 639 aa17.34■□□□□ 0.37
Shmt1-201ENSMUST00000018744 Gzf1Q4VBD9 706 aa17.34■□□□□ 0.37
Shmt1-201ENSMUST00000018744 Sirt1Q923E4 737 aa17.34■□□□□ 0.37
Shmt1-201ENSMUST00000018744 Slit3Q9WVB4 1523 aa17.33■□□□□ 0.37
Shmt1-201ENSMUST00000018744 Wwc1Q5SXA9 1104 aa17.33■□□□□ 0.36
Shmt1-201ENSMUST00000018744 Cavin2Q63918 418 aaKnown RBP17.33■□□□□ 0.36
Shmt1-201ENSMUST00000018744 Fbxo2Q80UW2 297 aa17.33■□□□□ 0.36
Shmt1-201ENSMUST00000018744 Sos1Q62245 1319 aa17.33■□□□□ 0.36
Shmt1-201ENSMUST00000018744 Chd4Q6PDQ2 1915 aaKnown RBP17.32■□□□□ 0.36
Shmt1-201ENSMUST00000018744 Becn1O88597 448 aa17.32■□□□□ 0.36
Shmt1-201ENSMUST00000018744 Chmp4bQ9D8B3 224 aaKnown RBP17.32■□□□□ 0.36
Shmt1-201ENSMUST00000018744 Nek4Q9Z1J2 792 aa17.32■□□□□ 0.36
Shmt1-201ENSMUST00000018744 PzpQ61838 1495 aa17.32■□□□□ 0.36
Shmt1-201ENSMUST00000018744 MarsQ68FL6 902 aaKnown RBP17.32■□□□□ 0.36
Shmt1-201ENSMUST00000018744 Astn2Q80Z10 1352 aa17.32■□□□□ 0.36
Shmt1-201ENSMUST00000018744 Rnf214Q8BFU3 668 aaKnown RBP17.31■□□□□ 0.36
Shmt1-201ENSMUST00000018744 Chd2E9PZM4 1827 aaKnown RBP17.31■□□□□ 0.36
Shmt1-201ENSMUST00000018744 Rasa1E9PYG6 1038 aa17.31■□□□□ 0.36
Shmt1-201ENSMUST00000018744 Ccdc146E9Q9F7 977 aa17.31■□□□□ 0.36
Shmt1-201ENSMUST00000018744 Tnnt2P50752 301 aa17.31■□□□□ 0.36
Shmt1-201ENSMUST00000018744 Vgll3P85442 326 aa17.31■□□□□ 0.36
Shmt1-201ENSMUST00000018744 Plppr3Q7TPB0 716 aa17.31■□□□□ 0.36
Shmt1-201ENSMUST00000018744 Rbm27Q5SFM8 1060 aaKnown RBP17.3■□□□□ 0.36
Shmt1-201ENSMUST00000018744 Tbc1d9Q3UYK3 1264 aa17.3■□□□□ 0.36
Shmt1-201ENSMUST00000018744 Safb2Q80YR5 991 aaKnown RBP17.3■□□□□ 0.36
Shmt1-201ENSMUST00000018744 Ric3Q8BPM6 367 aa17.3■□□□□ 0.36
Shmt1-201ENSMUST00000018744 Casq1O09165 405 aa17.3■□□□□ 0.36
Shmt1-201ENSMUST00000018744 Tnrc6bQ8BKI2 1810 aaKnown RBP17.29■□□□□ 0.36
Shmt1-201ENSMUST00000018744 LifrP42703 1092 aa17.29■□□□□ 0.36
Shmt1-201ENSMUST00000018744 Fez1Q8K0X8 392 aa17.29■□□□□ 0.36
Shmt1-201ENSMUST00000018744 TimelessQ9R1X4 1197 aa17.29■□□□□ 0.36
Shmt1-201ENSMUST00000018744 Znf335A2A5K6 1337 aa17.29■□□□□ 0.36
Shmt1-201ENSMUST00000018744 Cetn4Q8K4K1 168 aa17.28■□□□□ 0.36
Shmt1-201ENSMUST00000018744 1700019A02RikA0A087WPV9 146 aa17.28■□□□□ 0.36
Shmt1-201ENSMUST00000018744 Gm9992B2RWK3 458 aa17.27■□□□□ 0.36
Shmt1-201ENSMUST00000018744 Unc93aQ710D3 458 aa17.27■□□□□ 0.36
Shmt1-201ENSMUST00000018744 CarsQ9ER72 831 aaKnown RBP17.27■□□□□ 0.36
Shmt1-201ENSMUST00000018744 Wdr63B2RY71 923 aa17.27■□□□□ 0.36
Shmt1-201ENSMUST00000018744 TmpoQ61033 693 aaKnown RBP17.27■□□□□ 0.36
Shmt1-201ENSMUST00000018744 Trim27Q62158 513 aa17.27■□□□□ 0.36
Shmt1-201ENSMUST00000018744 Pnma3Q8JZW8 466 aa17.27■□□□□ 0.36
Shmt1-201ENSMUST00000018744 Aifm3Q3TY86 605 aa17.26■□□□□ 0.35
Shmt1-201ENSMUST00000018744 Lekr1B2RVN1 116 aa17.26■□□□□ 0.35
Shmt1-201ENSMUST00000018744 4931400O07RikQ9D4M5 137 aa17.26■□□□□ 0.35
Shmt1-201ENSMUST00000018744 Kif24Q6NWW5 1356 aa17.26■□□□□ 0.35
Shmt1-201ENSMUST00000018744 CemipQ8BI06 1361 aa17.26■□□□□ 0.35
Shmt1-201ENSMUST00000018744 Sox12Q04890 314 aa17.25■□□□□ 0.35
Shmt1-201ENSMUST00000018744 Pdcl2Q78Y63 240 aa17.25■□□□□ 0.35
Shmt1-201ENSMUST00000018744 Syce3B5KM66 88 aa17.25■□□□□ 0.35
Shmt1-201ENSMUST00000018744 Med1Q925J9 1575 aa17.25■□□□□ 0.35
Shmt1-201ENSMUST00000018744 Chl1P70232 1209 aa17.24■□□□□ 0.35
Shmt1-201ENSMUST00000018744 Adamtsl3G3UXC7 1706 aa17.24■□□□□ 0.35
Shmt1-201ENSMUST00000018744 Pibf1E9Q6K3 756 aa17.24■□□□□ 0.35
Shmt1-201ENSMUST00000018744 Kdm4cQ8VCD7 1054 aa17.24■□□□□ 0.35
Shmt1-201ENSMUST00000018744 Chmp4cQ9D7F7 232 aa17.23■□□□□ 0.35
Shmt1-201ENSMUST00000018744 Idi1P58044 227 aa17.23■□□□□ 0.35
Shmt1-201ENSMUST00000018744 Rab11fip3Q8CHD8 1047 aa17.23■□□□□ 0.35
Shmt1-201ENSMUST00000018744 Fam13bQ8K2H3 851 aa17.23■□□□□ 0.35
Shmt1-201ENSMUST00000018744 Ggnbp2Q5SV77 696 aa17.22■□□□□ 0.35
Shmt1-201ENSMUST00000018744 Gtf3c5Q8R2T8 520 aa17.22■□□□□ 0.35
Shmt1-201ENSMUST00000018744 Cdk12Q14AX6 1484 aaKnown RBP17.22■□□□□ 0.35
Shmt1-201ENSMUST00000018744 Zscan25B2RX31 543 aa17.22■□□□□ 0.35
Shmt1-201ENSMUST00000018744 Aldh1l2Q8K009 923 aa17.22■□□□□ 0.35
Shmt1-201ENSMUST00000018744 Triml2E9PW10 424 aa17.21■□□□□ 0.35
Shmt1-201ENSMUST00000018744 N4bp2F8VQG7 1678 aaKnown RBP17.21■□□□□ 0.35
Shmt1-201ENSMUST00000018744 Scaf1Q5U4C3 1256 aaKnown RBP17.21■□□□□ 0.35
Shmt1-201ENSMUST00000018744 HnrnpuQ8VEK3 800 aaKnown RBP17.21■□□□□ 0.35
Shmt1-201ENSMUST00000018744 Prim1P20664 417 aa17.2■□□□□ 0.34
Shmt1-201ENSMUST00000018744 Cabp4Q8VHC5 271 aa17.2■□□□□ 0.34
Shmt1-201ENSMUST00000018744 Mdc1Q5PSV9 1707 aa17.2■□□□□ 0.34
Shmt1-201ENSMUST00000018744 Gadd45bP22339 160 aa17.2■□□□□ 0.34
Shmt1-201ENSMUST00000018744 Eif4g2Q62448 906 aaKnown RBP17.2■□□□□ 0.34
Shmt1-201ENSMUST00000018744 Dennd6aQ8BH65 605 aa17.2■□□□□ 0.34
Shmt1-201ENSMUST00000018744 Rcan3Q9JKK0 239 aa17.2■□□□□ 0.34
Shmt1-201ENSMUST00000018744 Rreb1Q3UH06 1700 aaKnown RBP17.2■□□□□ 0.34
Shmt1-201ENSMUST00000018744 Snap23O09044 210 aa17.19■□□□□ 0.34
Shmt1-201ENSMUST00000018744 Aldh8a1Q8BH00 487 aa17.19■□□□□ 0.34
Shmt1-201ENSMUST00000018744 Nlgn1Q99K10 843 aa17.19■□□□□ 0.34
Shmt1-201ENSMUST00000018744 Arap3Q8R5G7 1538 aa17.19■□□□□ 0.34
Shmt1-201ENSMUST00000018744 Nckap5lQ6GQX2 1323 aa17.19■□□□□ 0.34
Shmt1-201ENSMUST00000018744 4930407I10RikD3Z5T8 1512 aa17.19■□□□□ 0.34
Shmt1-201ENSMUST00000018744 Eya1P97767 591 aa17.18■□□□□ 0.34
Shmt1-201ENSMUST00000018744 Cgnl1Q6AW69 1298 aa17.18■□□□□ 0.34
Shmt1-201ENSMUST00000018744 Dnajc14Q921R4 703 aa17.18■□□□□ 0.34
Shmt1-201ENSMUST00000018744 FanclQ9CR14 375 aa17.18■□□□□ 0.34
Shmt1-201ENSMUST00000018744 ImpactO55091 318 aa17.18■□□□□ 0.34
Shmt1-201ENSMUST00000018744 Tm6sf1P58749 370 aa17.18■□□□□ 0.34
Shmt1-201ENSMUST00000018744 Cbx1P83917 185 aaKnown RBP17.18■□□□□ 0.34
Shmt1-201ENSMUST00000018744 Zkscan1Q8BGS3 561 aaKnown RBP17.18■□□□□ 0.34
Shmt1-201ENSMUST00000018744 Gm21190A0A0G2JGJ6 266 aa17.18■□□□□ 0.34
Shmt1-201ENSMUST00000018744 Rtf1A2AQ19 715 aaKnown RBP17.18■□□□□ 0.34
Shmt1-201ENSMUST00000018744 Fam13aQ8BGI4 693 aa17.17■□□□□ 0.34
Shmt1-201ENSMUST00000018744 NalcnQ8BXR5 1738 aa17.17■□□□□ 0.34
Shmt1-201ENSMUST00000018744 Gm10563F6WIE4 79 aa17.17■□□□□ 0.34
Shmt1-201ENSMUST00000018744 Gdpd2Q9ESM6 539 aa17.17■□□□□ 0.34
Shmt1-201ENSMUST00000018744 Abcc10Q8R4P9 1501 aa17.17■□□□□ 0.34
Shmt1-201ENSMUST00000018744 FancaQ9JL70 1439 aa17.17■□□□□ 0.34
Shmt1-201ENSMUST00000018744 Adgrb1Q3UHD1 1582 aa17.16■□□□□ 0.34
Shmt1-201ENSMUST00000018744 Mindy4Q3UQI9 744 aa17.16■□□□□ 0.34
Shmt1-201ENSMUST00000018744 Phf23Q8BSN5 401 aa17.16■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 72.8 ms