RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C RTT10Q08924 1013 aa4.48□□□□□ -1.69
RPC40YPR110C YTA7P40340 1379 aa4.48□□□□□ -1.69
RPC40YPR110C GCR1P07261 785 aa4.47□□□□□ -1.69
RPC40YPR110C KNS1P32350 737 aaPredicted RBP4.47□□□□□ -1.69
RPC40YPR110C SQT1P35184 431 aa4.47□□□□□ -1.69
RPC40YPR110C RDH54P38086 958 aa4.47□□□□□ -1.69
RPC40YPR110C EXO5P38289 585 aa4.47□□□□□ -1.69
RPC40YPR110C VAC8P39968 578 aa4.47□□□□□ -1.69
RPC40YPR110C LSB6P42951 607 aa4.47□□□□□ -1.69
RPC40YPR110C RSM26P47141 266 aa4.47□□□□□ -1.69
RPC40YPR110C ENT3P47160 408 aa4.47□□□□□ -1.69
RPC40YPR110C YGR053CP53234 283 aa4.47□□□□□ -1.69
RPC40YPR110C PHM7Q12252 991 aa4.47□□□□□ -1.69
RPC40YPR110C GPM1P00950 247 aaKnown RBP4.46□□□□□ -1.7
RPC40YPR110C HEM13P11353 328 aaKnown RBP4.46□□□□□ -1.7
RPC40YPR110C PDC5P16467 563 aaKnown RBP4.46□□□□□ -1.7
RPC40YPR110C MSH3P25336 1018 aa4.46□□□□□ -1.7
RPC40YPR110C FET4P40988 552 aa4.46□□□□□ -1.7
RPC40YPR110C SBE2P42223 864 aaKnown RBP4.46□□□□□ -1.7
RPC40YPR110C HAS1Q03532 505 aaKnown RBP4.46□□□□□ -1.7
RPC40YPR110C TMA46Q12000 345 aaKnown RBP4.46□□□□□ -1.7
RPC40YPR110C SLP1Q12232 587 aa4.46□□□□□ -1.7
RPC40YPR110C VMA4P22203 233 aaKnown RBP4.45□□□□□ -1.7
RPC40YPR110C YKL077WP36081 392 aa4.45□□□□□ -1.7
RPC40YPR110C ARL1P38116 183 aaKnown RBP4.45□□□□□ -1.7
RPC40YPR110C YJL049WP47048 450 aa4.45□□□□□ -1.7
RPC40YPR110C PEX13P80667 386 aa4.45□□□□□ -1.7
RPC40YPR110C YIG1Q08956 461 aa4.45□□□□□ -1.7
RPC40YPR110C SSF2Q12153 453 aaPredicted RBP4.45□□□□□ -1.7
RPC40YPR110C NAR1P23503 491 aaKnown RBP4.44□□□□□ -1.7
RPC40YPR110C HXT13P39924 564 aa4.44□□□□□ -1.7
RPC40YPR110C GIP2P40036 548 aa4.44□□□□□ -1.7
RPC40YPR110C XKS1P42826 600 aa4.44□□□□□ -1.7
RPC40YPR110C FAA4P47912 694 aaKnown RBP4.44□□□□□ -1.7
RPC40YPR110C UTP22P53254 1237 aaPredicted RBP4.44□□□□□ -1.7
RPC40YPR110C SOK2P53438 785 aaPredicted RBP4.44□□□□□ -1.7
RPC40YPR110C HXT17P53631 564 aa4.44□□□□□ -1.7
RPC40YPR110C CWC24P53769 259 aa4.44□□□□□ -1.7
RPC40YPR110C SIW14P53965 281 aa4.44□□□□□ -1.7
RPC40YPR110C HXT15P54854 567 aa4.44□□□□□ -1.7
RPC40YPR110C GDE1Q02979 1223 aa4.44□□□□□ -1.7
RPC40YPR110C GIS4Q04233 774 aa4.44□□□□□ -1.7
RPC40YPR110C HDA2Q06629 674 aa4.44□□□□□ -1.7
RPC40YPR110C YOL098CQ12496 1037 aa4.44□□□□□ -1.7
RPC40YPR110C AI1P03875 834 aa4.43□□□□□ -1.7
RPC40YPR110C TY1A-LR4P0C2I8 440 aaKnown RBP4.43□□□□□ -1.7
RPC40YPR110C TY1A-DR6P0CX70 440 aa4.43□□□□□ -1.7
RPC40YPR110C TY1A-ER1P0CX71 440 aa4.43□□□□□ -1.7
RPC40YPR110C TY1A-LR2P0CX72 440 aa4.43□□□□□ -1.7
RPC40YPR110C TY1A-PLP0CX73 440 aa4.43□□□□□ -1.7
RPC40YPR110C TY1A-JR1P0CX74 440 aa4.43□□□□□ -1.7
RPC40YPR110C TY1A-LR3P0CX75 440 aa4.43□□□□□ -1.7
RPC40YPR110C TY1A-ML2P0CX76 440 aa4.43□□□□□ -1.7
RPC40YPR110C RAD27P26793 382 aa4.43□□□□□ -1.7
RPC40YPR110C NEO1P40527 1151 aa4.43□□□□□ -1.7
RPC40YPR110C EEB1Q02891 456 aa4.43□□□□□ -1.7
RPC40YPR110C SPO71Q03868 1245 aa4.43□□□□□ -1.7
RPC40YPR110C FPR4Q06205 392 aaPredicted RBP4.43□□□□□ -1.7
RPC40YPR110C MRL1Q06815 381 aa4.43□□□□□ -1.7
RPC40YPR110C TY1A-GR1Q12085 440 aa4.43□□□□□ -1.7
RPC40YPR110C WRS1Q12109 432 aaKnown RBP4.43□□□□□ -1.7
RPC40YPR110C TY1A-PR3Q6Q5H1 440 aaKnown RBP4.43□□□□□ -1.7
RPC40YPR110C TY1A-OLQ92392 440 aaKnown RBP4.43□□□□□ -1.7
RPC40YPR110C TY4B-PA0A0B7P3V8 1104 aa4.42□□□□□ -1.7
RPC40YPR110C NEM1P38757 446 aa4.42□□□□□ -1.7
RPC40YPR110C PAN5P38787 379 aa4.42□□□□□ -1.7
RPC40YPR110C TAT2P38967 592 aa4.42□□□□□ -1.7
RPC40YPR110C POL5P39985 1022 aaKnown RBP4.42□□□□□ -1.7
RPC40YPR110C GCV1P48015 400 aa4.42□□□□□ -1.7
RPC40YPR110C MEC3Q02574 474 aa4.42□□□□□ -1.7
RPC40YPR110C OPI10Q08202 246 aa4.42□□□□□ -1.7
RPC40YPR110C REC8Q12188 680 aa4.42□□□□□ -1.7
RPC40YPR110C TY4A-HQ6Q5P6 413 aa4.42□□□□□ -1.7
RPC40YPR110C SLS1P42900 643 aa4.41□□□□□ -1.7
RPC40YPR110C MTR4P47047 1073 aaKnown RBP4.41□□□□□ -1.7
RPC40YPR110C CCT8P47079 568 aaKnown RBP4.41□□□□□ -1.7
RPC40YPR110C RKM2Q03942 479 aa4.41□□□□□ -1.7
RPC40YPR110C UTP5Q04177 643 aaKnown RBP4.41□□□□□ -1.7
RPC40YPR110C SCP160P06105 1222 aaKnown RBP RIP-Chip data4.4□□□□□ -1.71 RIP-Chip
RPC40YPR110C RER2P35196 286 aa4.4□□□□□ -1.71
RPC40YPR110C ADD66P36040 267 aa4.4□□□□□ -1.71
RPC40YPR110C PGM2P37012 569 aaKnown RBP4.4□□□□□ -1.71
RPC40YPR110C ALG14P38242 237 aa4.4□□□□□ -1.71
RPC40YPR110C SPF1P39986 1215 aaKnown RBP4.4□□□□□ -1.71
RPC40YPR110C EST2Q06163 884 aa4.4□□□□□ -1.71
RPC40YPR110C TDA6Q06466 467 aa4.4□□□□□ -1.71
RPC40YPR110C STI1P15705 589 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71not detected
RPC40YPR110C SAC7P17121 654 aa4.39□□□□□ -1.71
RPC40YPR110C GRX1P25373 110 aaKnown RBP4.39□□□□□ -1.71
RPC40YPR110C LYP1P32487 611 aa4.39□□□□□ -1.71
RPC40YPR110C TED1P40533 473 aa4.39□□□□□ -1.71
RPC40YPR110C KRI1P42846 591 aaKnown RBP4.39□□□□□ -1.71
RPC40YPR110C IOC3P43596 787 aa4.39□□□□□ -1.71
RPC40YPR110C FAR11P53917 953 aa4.39□□□□□ -1.71
RPC40YPR110C ROD1Q02805 837 aa4.39□□□□□ -1.71
RPC40YPR110C NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71not detected
RPC40YPR110C NSE3Q05541 303 aa4.39□□□□□ -1.71
RPC40YPR110C YLL054CQ12244 843 aa4.39□□□□□ -1.71
RPC40YPR110C NHA1Q99271 985 aa4.39□□□□□ -1.71
RPC40YPR110C AGP1P25376 633 aa4.38□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms