RNA–Protein interactions for RNA: YPR008W

HAA1, Transcript of Transcriptional activator involved in adaptation to weak acid stress, yeast

Gene HAA1, Length 2,085 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HAA1	YPR008W	MCM5	P29496	775 aa	Known RBP	4.66	□□□□□ -1.66
HAA1	YPR008W	SAF1	P38352	637 aa		4.65	□□□□□ -1.66
HAA1	YPR008W	YKR073C	P36153	106 aa		4.65	□□□□□ -1.67
HAA1	YPR008W	THI12	P42883	340 aa		4.65	□□□□□ -1.67
HAA1	YPR008W	THI5	P43534	340 aa		4.65	□□□□□ -1.67
HAA1	YPR008W	THI11	P47183	340 aa		4.65	□□□□□ -1.67
HAA1	YPR008W	YML020W	Q03722	664 aa		4.65	□□□□□ -1.67
HAA1	YPR008W	YCS4	Q06156	1176 aa		4.65	□□□□□ -1.67
HAA1	YPR008W	PMT7	Q06644	662 aa		4.65	□□□□□ -1.67
HAA1	YPR008W	THI13	Q07748	340 aa		4.65	□□□□□ -1.67
HAA1	YPR008W	ALG6	Q12001	544 aa	Known RBP	4.65	□□□□□ -1.67
HAA1	YPR008W	RVS167	P39743	482 aa	Known RBP	4.64	□□□□□ -1.67
HAA1	YPR008W	YMR074C	Q04773	145 aa		4.64	□□□□□ -1.67
HAA1	YPR008W	COQ2	P32378	372 aa		4.63	□□□□□ -1.67
HAA1	YPR008W	GCV1	P48015	400 aa		4.63	□□□□□ -1.67
HAA1	YPR008W	UTP22	P53254	1237 aa	Predicted RBP	4.63	□□□□□ -1.67
HAA1	YPR008W	PRP40	P33203	583 aa	Known RBP	4.63	□□□□□ -1.67
HAA1	YPR008W	KAE1	P36132	386 aa		4.63	□□□□□ -1.67
HAA1	YPR008W	GPT2	P36148	743 aa		4.63	□□□□□ -1.67
HAA1	YPR008W	EXO5	P38289	585 aa		4.63	□□□□□ -1.67
HAA1	YPR008W	INP52	P50942	1183 aa		4.63	□□□□□ -1.67
HAA1	YPR008W	YGR130C	P53278	816 aa		4.63	□□□□□ -1.67
HAA1	YPR008W	FAR11	P53917	953 aa		4.63	□□□□□ -1.67
HAA1	YPR008W	VPS35	P34110	944 aa		4.62	□□□□□ -1.67
HAA1	YPR008W	CIC1	P38779	376 aa	Known RBP	4.62	□□□□□ -1.67
HAA1	YPR008W	FAA3	P39002	694 aa		4.62	□□□□□ -1.67
HAA1	YPR008W	MEC3	Q02574	474 aa		4.62	□□□□□ -1.67
HAA1	YPR008W	DAL4	Q04895	635 aa		4.62	□□□□□ -1.67
HAA1	YPR008W	YOR223W	Q12015	292 aa		4.62	□□□□□ -1.67
HAA1	YPR008W	SLS1	P42900	643 aa		4.61	□□□□□ -1.67
HAA1	YPR008W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	RIP-Chip
HAA1	YPR008W	DOT1	Q04089	582 aa	Known RBP	4.61	□□□□□ -1.67
HAA1	YPR008W	NOP8	Q08287	484 aa	Predicted RBP	4.61	□□□□□ -1.67
HAA1	YPR008W	CHS2	P14180	963 aa		4.61	□□□□□ -1.67
HAA1	YPR008W	RPT1	P33299	467 aa	Known RBP	4.61	□□□□□ -1.67
HAA1	YPR008W	SEA4	P38164	1038 aa		4.61	□□□□□ -1.67
HAA1	YPR008W	NEM1	P38757	446 aa		4.61	□□□□□ -1.67
HAA1	YPR008W	ULP1	Q02724	621 aa		4.61	□□□□□ -1.67
HAA1	YPR008W	HEM13	P11353	328 aa	Known RBP	4.6	□□□□□ -1.67
HAA1	YPR008W	ATE1	P16639	503 aa		4.6	□□□□□ -1.67
HAA1	YPR008W	REI1	P38344	393 aa	Predicted RBP	4.6	□□□□□ -1.67
HAA1	YPR008W	NOG1	Q02892	647 aa	Known RBP	4.6	□□□□□ -1.67
HAA1	YPR008W	GIC2	Q06648	383 aa		4.6	□□□□□ -1.67
HAA1	YPR008W	SEC20	P28791	383 aa		4.6	□□□□□ -1.67
HAA1	YPR008W	GCD6	P32501	712 aa	Known RBP	4.6	□□□□□ -1.67
HAA1	YPR008W	OMA1	P36163	345 aa		4.6	□□□□□ -1.67
HAA1	YPR008W	CTH1	P47976	325 aa		4.6	□□□□□ -1.67
HAA1	YPR008W	EAR1	Q03212	550 aa		4.6	□□□□□ -1.67
HAA1	YPR008W	INO80	P53115	1489 aa		4.59	□□□□□ -1.67
HAA1	YPR008W	YGR045C	P53229	120 aa		4.59	□□□□□ -1.67
HAA1	YPR008W	HXK1	P04806	485 aa	Known RBP	4.58	□□□□□ -1.68
HAA1	YPR008W	MSH3	P25336	1018 aa		4.58	□□□□□ -1.68
HAA1	YPR008W	WHI3	P34761	661 aa	Known RBP	4.58	□□□□□ -1.68
HAA1	YPR008W	TOS1	P38288	455 aa		4.58	□□□□□ -1.68
HAA1	YPR008W	MSH4	P40965	878 aa	Predicted RBP	4.58	□□□□□ -1.68
HAA1	YPR008W	SPO74	P45819	413 aa		4.58	□□□□□ -1.68
HAA1	YPR008W	ELA1	P53861	379 aa	Predicted RBP	4.58	□□□□□ -1.68
HAA1	YPR008W	PEX13	P80667	386 aa		4.58	□□□□□ -1.68
HAA1	YPR008W	MED7	Q08278	222 aa		4.58	□□□□□ -1.68
HAA1	YPR008W	CYC7	P00045	113 aa		4.57	□□□□□ -1.68
HAA1	YPR008W	GCD1	P09032	578 aa	Predicted RBP	4.57	□□□□□ -1.68
HAA1	YPR008W	PIC2	P40035	300 aa		4.57	□□□□□ -1.68
HAA1	YPR008W	YPL109C	Q02981	657 aa		4.57	□□□□□ -1.68
HAA1	YPR008W	RRP15	Q06511	250 aa	Predicted RBP	4.57	□□□□□ -1.68
HAA1	YPR008W	MAC1	P35192	417 aa		4.57	□□□□□ -1.68
HAA1	YPR008W	YKL077W	P36081	392 aa		4.56	□□□□□ -1.68
HAA1	YPR008W	SDH1	Q00711	640 aa		4.56	□□□□□ -1.68
HAA1	YPR008W	UTP5	Q04177	643 aa	Known RBP	4.56	□□□□□ -1.68
HAA1	YPR008W	MCM2	P29469	868 aa		4.55	□□□□□ -1.68
HAA1	YPR008W	RDH54	P38086	958 aa		4.55	□□□□□ -1.68
HAA1	YPR008W	PEX28	P38848	579 aa		4.55	□□□□□ -1.68
HAA1	YPR008W	ALT1	P52893	592 aa		4.55	□□□□□ -1.68
HAA1	YPR008W	MAG2	Q06436	670 aa	Known RBP	4.55	□□□□□ -1.68
HAA1	YPR008W	YLL054C	Q12244	843 aa		4.55	□□□□□ -1.68
HAA1	YPR008W	RPS4A	P0CX35	261 aa	Known RBP	4.55	□□□□□ -1.68
HAA1	YPR008W	RPS4B	P0CX36	261 aa	Known RBP	4.55	□□□□□ -1.68
HAA1	YPR008W	MMM1	P41800	426 aa		4.55	□□□□□ -1.68
HAA1	YPR008W	POL32	P47110	350 aa		4.55	□□□□□ -1.68
HAA1	YPR008W	RSM26	P47141	266 aa		4.55	□□□□□ -1.68
HAA1	YPR008W	YGL140C	P53120	1219 aa		4.55	□□□□□ -1.68
HAA1	YPR008W	ADI1	Q03677	179 aa		4.55	□□□□□ -1.68
HAA1	YPR008W	OXR1	Q08952	273 aa		4.55	□□□□□ -1.68
HAA1	YPR008W	TCB3	Q03640	1545 aa	Known RBP	4.55	□□□□□ -1.68
HAA1	YPR008W	MSB1	P21339	1137 aa	Known RBP	4.54	□□□□□ -1.68
HAA1	YPR008W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
HAA1	YPR008W	ARL1	P38116	183 aa	Known RBP	4.54	□□□□□ -1.68
HAA1	YPR008W	NMD3	P38861	518 aa	Known RBP	4.54	□□□□□ -1.68
HAA1	YPR008W	BRE4	Q07660	1125 aa		4.54	□□□□□ -1.68
HAA1	YPR008W	SLD2	P34252	453 aa		4.53	□□□□□ -1.68
HAA1	YPR008W	FYV10	P40492	516 aa		4.53	□□□□□ -1.68
HAA1	YPR008W	SPR28	Q04921	423 aa		4.53	□□□□□ -1.68
HAA1	YPR008W	RPS26A	P39938	119 aa	Known RBP	4.53	□□□□□ -1.68
HAA1	YPR008W	RPS26B	P39939	119 aa	Known RBP	4.53	□□□□□ -1.68
HAA1	YPR008W	OYE3	P41816	400 aa	Predicted RBP	4.53	□□□□□ -1.68
HAA1	YPR008W	XKS1	P42826	600 aa		4.53	□□□□□ -1.68
HAA1	YPR008W	KAR2	P16474	682 aa	Known RBP	4.52	□□□□□ -1.69
HAA1	YPR008W	NFS1	P25374	497 aa		4.52	□□□□□ -1.69
HAA1	YPR008W	LIP5	P32875	414 aa		4.52	□□□□□ -1.69
HAA1	YPR008W	SHU2	P38957	223 aa		4.52	□□□□□ -1.69
HAA1	YPR008W	AVO1	Q08236	1176 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms