RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W ERP5P38819 212 aa7.74□□□□□ -1.17
VPS28YPL065W SAP155P43612 1002 aa7.74□□□□□ -1.17
VPS28YPL065W DUR3P33413 735 aa7.73□□□□□ -1.17
VPS28YPL065W SAM37P50110 327 aa7.73□□□□□ -1.17
VPS28YPL065W NUT1P53114 1132 aa7.73□□□□□ -1.17
VPS28YPL065W REI1P38344 393 aaPredicted RBP7.72□□□□□ -1.17
VPS28YPL065W SSF1P38789 453 aaPredicted RBP7.72□□□□□ -1.17
VPS28YPL065W MDJ2P42834 146 aa7.72□□□□□ -1.17
VPS28YPL065W AOS1Q06624 347 aa7.72□□□□□ -1.17
VPS28YPL065W INP54Q08227 384 aaKnown RBP7.72□□□□□ -1.17
VPS28YPL065W WHI3P34761 661 aaKnown RBP7.71□□□□□ -1.18
VPS28YPL065W ARL1P38116 183 aaKnown RBP7.71□□□□□ -1.18
VPS28YPL065W RVS167P39743 482 aaKnown RBP7.71□□□□□ -1.18
VPS28YPL065W YAF9P53930 226 aa7.71□□□□□ -1.18
VPS28YPL065W NOC3Q07896 663 aaPredicted RBP7.71□□□□□ -1.18
VPS28YPL065W RCM1P53972 490 aa7.7□□□□□ -1.18
VPS28YPL065W SDH1Q00711 640 aa7.7□□□□□ -1.18
VPS28YPL065W MCM5P29496 775 aaKnown RBP7.69□□□□□ -1.18
VPS28YPL065W ELM1P32801 640 aa7.69□□□□□ -1.18
VPS28YPL065W SHU2P38957 223 aa7.69□□□□□ -1.18
VPS28YPL065W GCD1P09032 578 aaPredicted RBP7.68□□□□□ -1.18
VPS28YPL065W RPS4AP0CX35 261 aaKnown RBP7.68□□□□□ -1.18
VPS28YPL065W RPS4BP0CX36 261 aaKnown RBP7.68□□□□□ -1.18
VPS28YPL065W YKL077WP36081 392 aa7.68□□□□□ -1.18
VPS28YPL065W CIC1P38779 376 aaKnown RBP7.68□□□□□ -1.18
VPS28YPL065W NUT2Q06213 157 aa7.68□□□□□ -1.18
VPS28YPL065W FRT1Q99332 602 aa7.67□□□□□ -1.18
VPS28YPL065W MSH4P40965 878 aaPredicted RBP7.66□□□□□ -1.18
VPS28YPL065W AVO1Q08236 1176 aa7.66□□□□□ -1.18
VPS28YPL065W ALG6Q12001 544 aaKnown RBP7.66□□□□□ -1.18
VPS28YPL065W SLD2P34252 453 aa7.65□□□□□ -1.18
VPS28YPL065W ECL1P48235 211 aa7.65□□□□□ -1.18
VPS28YPL065W ALT1P52893 592 aa7.65□□□□□ -1.18
VPS28YPL065W YCS4Q06156 1176 aa7.65□□□□□ -1.18
VPS28YPL065W NNK1P36003 928 aa7.64□□□□□ -1.19
VPS28YPL065W MON1P53129 644 aa7.64□□□□□ -1.19
VPS28YPL065W GPI13Q07830 1017 aa7.64□□□□□ -1.19
VPS28YPL065W SMY2P32909 740 aaKnown RBP7.63□□□□□ -1.19
VPS28YPL065W SEN54Q02825 467 aaPredicted RBP7.63□□□□□ -1.19
VPS28YPL065W POL12P38121 705 aaPredicted RBP7.62□□□□□ -1.19
VPS28YPL065W OYE3P41816 400 aaPredicted RBP7.62□□□□□ -1.19
VPS28YPL065W YGR045CP53229 120 aa7.62□□□□□ -1.19
VPS28YPL065W NFS1P25374 497 aa7.61□□□□□ -1.19
VPS28YPL065W GCD6P32501 712 aaKnown RBP7.61□□□□□ -1.19
VPS28YPL065W ELA1P53861 379 aaPredicted RBP7.61□□□□□ -1.19
VPS28YPL065W DFG16Q99234 619 aa7.61□□□□□ -1.19
VPS28YPL065W TY1A-LR4P0C2I8 440 aaKnown RBP7.6□□□□□ -1.19
VPS28YPL065W TY1A-DR6P0CX70 440 aa7.6□□□□□ -1.19
VPS28YPL065W TY1A-ER1P0CX71 440 aa7.6□□□□□ -1.19
VPS28YPL065W TY1A-LR2P0CX72 440 aa7.6□□□□□ -1.19
VPS28YPL065W TY1A-PLP0CX73 440 aa7.6□□□□□ -1.19
VPS28YPL065W TY1A-JR1P0CX74 440 aa7.6□□□□□ -1.19
VPS28YPL065W TY1A-LR3P0CX75 440 aa7.6□□□□□ -1.19
VPS28YPL065W TY1A-ML2P0CX76 440 aa7.6□□□□□ -1.19
VPS28YPL065W ADP1P25371 1049 aa7.6□□□□□ -1.19
VPS28YPL065W SEA4P38164 1038 aa7.6□□□□□ -1.19
VPS28YPL065W TY1A-GR1Q12085 440 aa7.6□□□□□ -1.19
VPS28YPL065W TY1A-PR3Q6Q5H1 440 aaKnown RBP7.6□□□□□ -1.19
VPS28YPL065W TY1A-OLQ92392 440 aaKnown RBP7.6□□□□□ -1.19
VPS28YPL065W EXO5P38289 585 aa7.59□□□□□ -1.19
VPS28YPL065W YHL050CP38721 697 aa7.59□□□□□ -1.19
VPS28YPL065W YHR219WP38900 624 aa7.59□□□□□ -1.19
VPS28YPL065W MTR4P47047 1073 aaKnown RBP7.59□□□□□ -1.19
VPS28YPL065W TRE1Q08919 783 aa7.59□□□□□ -1.19
VPS28YPL065W KAR2P16474 682 aaKnown RBP7.58□□□□□ -1.2
VPS28YPL065W LRG1P35688 1017 aa7.58□□□□□ -1.2
VPS28YPL065W NIT1P40447 199 aa7.58□□□□□ -1.2
VPS28YPL065W NOG1Q02892 647 aaKnown RBP7.58□□□□□ -1.2
VPS28YPL065W YVC1Q12324 675 aa7.58□□□□□ -1.2
VPS28YPL065W HSP78P33416 811 aa7.57□□□□□ -1.2
VPS28YPL065W VPS35P34110 944 aa7.57□□□□□ -1.2
VPS28YPL065W SEG2P34250 1132 aa7.57□□□□□ -1.2
VPS28YPL065W PRP43P53131 767 aaKnown RBP7.57□□□□□ -1.2
VPS28YPL065W ATG14P38270 344 aa7.56□□□□□ -1.2
VPS28YPL065W IPL1P38991 367 aa7.56□□□□□ -1.2
VPS28YPL065W STM1P39015 273 aaKnown RBP7.56□□□□□ -1.2
VPS28YPL065W UBP5P39944 805 aa7.56□□□□□ -1.2
VPS28YPL065W HSE1P38753 452 aa7.55□□□□□ -1.2
VPS28YPL065W SLS1P42900 643 aa7.55□□□□□ -1.2
VPS28YPL065W ORC3P54790 616 aa7.55□□□□□ -1.2
VPS28YPL065W EAR1Q03212 550 aa7.55□□□□□ -1.2
VPS28YPL065W RNQ1P25367 405 aa7.54□□□□□ -1.2
VPS28YPL065W YAR028WP39548 234 aa7.54□□□□□ -1.2
VPS28YPL065W SSY1Q03770 852 aa7.54□□□□□ -1.2
VPS28YPL065W LAP2Q10740 671 aa7.54□□□□□ -1.2
VPS28YPL065W PPX1P38698 397 aa7.53□□□□□ -1.2
VPS28YPL065W NEM1P38757 446 aa7.53□□□□□ -1.2
VPS28YPL065W OXR1Q08952 273 aa7.53□□□□□ -1.2
VPS28YPL065W VMA4P22203 233 aaKnown RBP7.52□□□□□ -1.21
VPS28YPL065W MSH3P25336 1018 aa7.52□□□□□ -1.21
VPS28YPL065W PRO1P32264 428 aa7.52□□□□□ -1.21
VPS28YPL065W PRP40P33203 583 aaKnown RBP7.52□□□□□ -1.21
VPS28YPL065W SQT1P35184 431 aa7.52□□□□□ -1.21
VPS28YPL065W PEX7P39108 375 aa7.52□□□□□ -1.21
VPS28YPL065W RSM26P47141 266 aa7.52□□□□□ -1.21
VPS28YPL065W PUS7Q08647 676 aaKnown RBP7.52□□□□□ -1.21
VPS28YPL065W MSC6Q08818 692 aaKnown RBP7.52□□□□□ -1.21
VPS28YPL065W PHO4P07270 312 aaKnown RBP7.51□□□□□ -1.21
VPS28YPL065W HEM3P28789 327 aa7.51□□□□□ -1.21
VPS28YPL065W PEX13P80667 386 aa7.51□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 65.9 ms