RNA–Protein interactions for RNA: YPL017C

IRC15, Transcript of Microtubule associated protein, yeast

Gene IRC15, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IRC15	YPL017C	PTC5	Q12511	572 aa		13.64	□□□□□ -0.23
IRC15	YPL017C	ALD2	P47771	506 aa		13.64	□□□□□ -0.23
IRC15	YPL017C	TMA16	Q08687	178 aa		13.64	□□□□□ -0.23
IRC15	YPL017C	VID27	P40157	782 aa		13.63	□□□□□ -0.23
IRC15	YPL017C	TPM2	P40414	161 aa		13.63	□□□□□ -0.23
IRC15	YPL017C	FAR11	P53917	953 aa		13.63	□□□□□ -0.23
IRC15	YPL017C	GDE1	Q02979	1223 aa		13.63	□□□□□ -0.23
IRC15	YPL017C	MYO5	Q04439	1219 aa	Known RBP	13.63	□□□□□ -0.23
IRC15	YPL017C	WRS1	Q12109	432 aa	Known RBP	13.63	□□□□□ -0.23
IRC15	YPL017C	RAD61	Q99359	647 aa		13.63	□□□□□ -0.23
IRC15	YPL017C	MET6	P05694	767 aa	Known RBP	13.62	□□□□□ -0.23
IRC15	YPL017C	RNR3	P21672	869 aa	Known RBP	13.62	□□□□□ -0.23
IRC15	YPL017C	HOS3	Q02959	697 aa	Known RBP	13.62	□□□□□ -0.23
IRC15	YPL017C	ERO1	Q03103	563 aa		13.62	□□□□□ -0.23
IRC15	YPL017C	UBX2	Q04228	584 aa		13.62	□□□□□ -0.23
IRC15	YPL017C	PSF3	Q12146	194 aa		13.62	□□□□□ -0.23
IRC15	YPL017C	RET1	P22276	1149 aa	Known RBP	13.61	□□□□□ -0.23
IRC15	YPL017C	TFG2	P41896	400 aa	Predicted RBP	13.61	□□□□□ -0.23
IRC15	YPL017C	YPL260W	Q08977	551 aa		13.61	□□□□□ -0.23
IRC15	YPL017C	SAC6	P32599	642 aa	Known RBP	13.6	□□□□□ -0.23
IRC15	YPL017C	GSM1	P42950	618 aa		13.6	□□□□□ -0.23
IRC15	YPL017C	EIS1	Q05050	843 aa	Known RBP	13.6	□□□□□ -0.23
IRC15	YPL017C	RPL22A	P05749	121 aa	Known RBP	13.59	□□□□□ -0.23
IRC15	YPL017C	ASF1	P32447	279 aa		13.59	□□□□□ -0.23
IRC15	YPL017C	YBL086C	P38177	466 aa		13.59	□□□□□ -0.23
IRC15	YPL017C	ALG2	P43636	503 aa		13.59	□□□□□ -0.23
IRC15	YPL017C	AFT2	Q08957	416 aa		13.59	□□□□□ -0.23
IRC15	YPL017C	MCM3	P24279	971 aa	Known RBP	13.59	□□□□□ -0.23
IRC15	YPL017C	BMH1	P29311	267 aa	Known RBP	13.59	□□□□□ -0.23
IRC15	YPL017C	STR2	P47164	639 aa		13.59	□□□□□ -0.23
IRC15	YPL017C	GIS4	Q04233	774 aa		13.59	□□□□□ -0.23
IRC15	YPL017C	MMR1	Q06324	491 aa		13.59	□□□□□ -0.23
IRC15	YPL017C	NBL1	Q3E7Y6	73 aa		13.59	□□□□□ -0.23
IRC15	YPL017C	CDC15	P27636	974 aa		13.58	□□□□□ -0.24
IRC15	YPL017C	YDR341C	Q05506	607 aa	Known RBP	13.58	□□□□□ -0.24
IRC15	YPL017C	APL4	Q12028	832 aa		13.58	□□□□□ -0.24
IRC15	YPL017C	LYS14	P40971	790 aa		13.57	□□□□□ -0.24
IRC15	YPL017C	OSW7	P43611	510 aa		13.57	□□□□□ -0.24
IRC15	YPL017C	NAF1	P53919	492 aa	Known RBP	13.57	□□□□□ -0.24
IRC15	YPL017C	RPT6	Q01939	405 aa	Known RBP	13.57	□□□□□ -0.24
IRC15	YPL017C	ARG82	P07250	355 aa		13.56	□□□□□ -0.24
IRC15	YPL017C	STI1	P15705	589 aa	Known RBP RIP-Chip data	13.56	□□□□□ -0.24	not detected
IRC15	YPL017C	LEO1	P38439	464 aa		13.56	□□□□□ -0.24
IRC15	YPL017C	APL6	P46682	809 aa		13.56	□□□□□ -0.24
IRC15	YPL017C	VPS75	P53853	264 aa		13.56	□□□□□ -0.24
IRC15	YPL017C	GAS5	Q08193	484 aa		13.56	□□□□□ -0.24
IRC15	YPL017C	UGA2	P38067	497 aa		13.55	□□□□□ -0.24
IRC15	YPL017C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	13.55	□□□□□ -0.24	not detected
IRC15	YPL017C	YGL138C	P53122	345 aa		13.55	□□□□□ -0.24
IRC15	YPL017C	PSR2	Q07949	397 aa		13.55	□□□□□ -0.24
IRC15	YPL017C	CEX1	Q12453	761 aa		13.55	□□□□□ -0.24
IRC15	YPL017C	ADE17	P38009	592 aa	Known RBP	13.54	□□□□□ -0.24
IRC15	YPL017C	PRP42	Q03776	544 aa	Known RBP	13.54	□□□□□ -0.24
IRC15	YPL017C	YOR296W	Q08748	1289 aa		13.54	□□□□□ -0.24
IRC15	YPL017C	KEL3	Q08979	651 aa	Predicted RBP	13.54	□□□□□ -0.24
IRC15	YPL017C	CIT1	P00890	479 aa		13.54	□□□□□ -0.24
IRC15	YPL017C	PDC1	P06169	563 aa	Known RBP	13.54	□□□□□ -0.24
IRC15	YPL017C	PCH2	P38126	564 aa		13.54	□□□□□ -0.24
IRC15	YPL017C	VPS8	P39702	1274 aa		13.54	□□□□□ -0.24
IRC15	YPL017C	PUS6	P53294	404 aa		13.54	□□□□□ -0.24
IRC15	YPL017C	GFD1	Q04839	188 aa	Known RBP	13.54	□□□□□ -0.24
IRC15	YPL017C	HCR1	Q05775	265 aa	Known RBP	13.54	□□□□□ -0.24
IRC15	YPL017C	MYO1	P08964	1928 aa		13.53	□□□□□ -0.24
IRC15	YPL017C	HIS4	P00815	799 aa	Known RBP	13.53	□□□□□ -0.24
IRC15	YPL017C	ALG1	P16661	449 aa		13.53	□□□□□ -0.24
IRC15	YPL017C	PHO13	P19881	312 aa		13.52	□□□□□ -0.25
IRC15	YPL017C	SRP54	P20424	541 aa	Known RBP	13.52	□□□□□ -0.25
IRC15	YPL017C	ACE2	P21192	770 aa		13.52	□□□□□ -0.25
IRC15	YPL017C	PXL1	P36166	706 aa		13.52	□□□□□ -0.25
IRC15	YPL017C	RTT107	P38850	1070 aa		13.52	□□□□□ -0.25
IRC15	YPL017C	GTT3	P39996	337 aa		13.52	□□□□□ -0.25
IRC15	YPL017C	MGA2	P40578	1113 aa		13.52	□□□□□ -0.25
IRC15	YPL017C	CEP3	P40969	608 aa		13.52	□□□□□ -0.25
IRC15	YPL017C	TIP41	Q12199	356 aa		13.52	□□□□□ -0.25
IRC15	YPL017C	SFI1	Q12369	946 aa		13.52	□□□□□ -0.25
IRC15	YPL017C	RPS7A	P26786	190 aa	Known RBP	13.51	□□□□□ -0.25
IRC15	YPL017C	RPL8B	P29453	256 aa	Known RBP	13.51	□□□□□ -0.25
IRC15	YPL017C	ERT1	P38140	529 aa		13.51	□□□□□ -0.25
IRC15	YPL017C	LSC2	P53312	427 aa		13.51	□□□□□ -0.25
IRC15	YPL017C	YET1	P35723	206 aa		13.5	□□□□□ -0.25
IRC15	YPL017C	YGR237C	P50089	785 aa		13.5	□□□□□ -0.25
IRC15	YPL017C	MSN5	P52918	1224 aa		13.5	□□□□□ -0.25
IRC15	YPL017C	YCG1	Q06680	1035 aa		13.5	□□□□□ -0.25
IRC15	YPL017C	FLO11	P08640	1367 aa		13.5	□□□□□ -0.25
IRC15	YPL017C	GSC2	P40989	1895 aa		13.5	□□□□□ -0.25
IRC15	YPL017C	MSH3	P25336	1018 aa		13.49	□□□□□ -0.25
IRC15	YPL017C	SPC110	P32380	944 aa		13.49	□□□□□ -0.25
IRC15	YPL017C	HIR1	P32479	840 aa		13.49	□□□□□ -0.25
IRC15	YPL017C	TRS120	Q04183	1289 aa		13.49	□□□□□ -0.25
IRC15	YPL017C	DSE3	Q08729	430 aa		13.49	□□□□□ -0.25
IRC15	YPL017C	GRX6	Q12438	231 aa		13.49	□□□□□ -0.25
IRC15	YPL017C	MAK11	P20484	414 aa	Known RBP	13.49	□□□□□ -0.25
IRC15	YPL017C	SEC65	P29478	273 aa		13.49	□□□□□ -0.25
IRC15	YPL017C	SHM1	P37292	490 aa	Predicted RBP	13.49	□□□□□ -0.25
IRC15	YPL017C	DAK2	P43550	591 aa		13.49	□□□□□ -0.25
IRC15	YPL017C	RTC4	P53850	401 aa		13.49	□□□□□ -0.25
IRC15	YPL017C	COG4	Q06096	861 aa		13.49	□□□□□ -0.25
IRC15	YPL017C	SMD2	Q06217	110 aa	Known RBP	13.49	□□□□□ -0.25
IRC15	YPL017C	RRP43	P25359	394 aa	Predicted RBP	13.48	□□□□□ -0.25
IRC15	YPL017C	STT3	P39007	718 aa	Known RBP	13.48	□□□□□ -0.25

Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms