RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W FRT1Q99332 602 aa5.66□□□□□ -1.5
HSH49YOR319W NPR1P22211 790 aa5.65□□□□□ -1.5
HSH49YOR319W PPX1P38698 397 aa5.65□□□□□ -1.5
HSH49YOR319W UBP5P39944 805 aa5.65□□□□□ -1.5
HSH49YOR319W YMR074CQ04773 145 aa5.65□□□□□ -1.5
HSH49YOR319W FLP1P03870 423 aa5.64□□□□□ -1.51
HSH49YOR319W RNQ1P25367 405 aa5.64□□□□□ -1.51
HSH49YOR319W RIM11P38615 370 aa5.64□□□□□ -1.51
HSH49YOR319W YHL050CP38721 697 aa5.64□□□□□ -1.51
HSH49YOR319W YHR219WP38900 624 aa5.64□□□□□ -1.51
HSH49YOR319W MSH6Q03834 1242 aa5.64□□□□□ -1.51
HSH49YOR319W CMR1Q12510 522 aaKnown RBP5.64□□□□□ -1.51
HSH49YOR319W DUR3P33413 735 aa5.63□□□□□ -1.51
HSH49YOR319W SEA4P38164 1038 aa5.63□□□□□ -1.51
HSH49YOR319W SAM37P50110 327 aa5.63□□□□□ -1.51
HSH49YOR319W INP54Q08227 384 aaKnown RBP5.63□□□□□ -1.51
HSH49YOR319W YLL054CQ12244 843 aa5.63□□□□□ -1.51
HSH49YOR319W HTS1P07263 546 aaKnown RBP5.62□□□□□ -1.51
HSH49YOR319W GCD1P09032 578 aaPredicted RBP5.62□□□□□ -1.51
HSH49YOR319W PRP5P21372 849 aaPredicted RBP5.62□□□□□ -1.51
HSH49YOR319W RRP15Q06511 250 aaPredicted RBP5.62□□□□□ -1.51
HSH49YOR319W PMT7Q06644 662 aa5.62□□□□□ -1.51
HSH49YOR319W GPI13Q07830 1017 aa5.62□□□□□ -1.51
HSH49YOR319W NOC3Q07896 663 aaPredicted RBP5.62□□□□□ -1.51
HSH49YOR319W YOR223WQ12015 292 aa5.62□□□□□ -1.51
HSH49YOR319W SEG2P34250 1132 aa5.61□□□□□ -1.51
HSH49YOR319W LRG1P35688 1017 aa5.61□□□□□ -1.51
HSH49YOR319W POL12P38121 705 aaPredicted RBP5.61□□□□□ -1.51
HSH49YOR319W GCV1P48015 400 aa5.61□□□□□ -1.51
HSH49YOR319W NUT1P53114 1132 aa5.61□□□□□ -1.51
HSH49YOR319W YIG1Q08956 461 aa5.61□□□□□ -1.51
HSH49YOR319W NSI1Q12457 570 aa5.61□□□□□ -1.51
HSH49YOR319W CIC1P38779 376 aaKnown RBP5.6□□□□□ -1.51
HSH49YOR319W MMM1P41800 426 aa5.6□□□□□ -1.51
HSH49YOR319W SAP155P43612 1002 aa5.6□□□□□ -1.51
HSH49YOR319W POL32P47110 350 aa5.6□□□□□ -1.51
HSH49YOR319W MCM5P29496 775 aaKnown RBP5.59□□□□□ -1.51
HSH49YOR319W RVS167P39743 482 aaKnown RBP5.59□□□□□ -1.51
HSH49YOR319W ECL1P48235 211 aa5.59□□□□□ -1.51
HSH49YOR319W UTP22P53254 1237 aaPredicted RBP5.59□□□□□ -1.51
HSH49YOR319W YAF9P53930 226 aa5.59□□□□□ -1.51
HSH49YOR319W SVF1Q05515 481 aa5.59□□□□□ -1.51
HSH49YOR319W WHI5Q12416 295 aa5.59□□□□□ -1.51
HSH49YOR319W CIT3P43635 486 aa5.58□□□□□ -1.52
HSH49YOR319W MON1P53129 644 aa5.58□□□□□ -1.52
HSH49YOR319W MEC3Q02574 474 aa5.58□□□□□ -1.52
HSH49YOR319W DFG16Q99234 619 aa5.58□□□□□ -1.52
HSH49YOR319W WHI3P34761 661 aaKnown RBP5.57□□□□□ -1.52
HSH49YOR319W GPT2P36148 743 aa5.57□□□□□ -1.52
HSH49YOR319W NIT1P40447 199 aa5.57□□□□□ -1.52
HSH49YOR319W THI12P42883 340 aa5.57□□□□□ -1.52
HSH49YOR319W THI5P43534 340 aa5.57□□□□□ -1.52
HSH49YOR319W THI11P47183 340 aa5.57□□□□□ -1.52
HSH49YOR319W DOT1Q04089 582 aaKnown RBP5.57□□□□□ -1.52
HSH49YOR319W YCS4Q06156 1176 aa5.57□□□□□ -1.52
HSH49YOR319W THI13Q07748 340 aa5.57□□□□□ -1.52
HSH49YOR319W GCD6P32501 712 aaKnown RBP5.56□□□□□ -1.52
HSH49YOR319W ATE1P16639 503 aa5.55□□□□□ -1.52
HSH49YOR319W YKL077WP36081 392 aa5.55□□□□□ -1.52
HSH49YOR319W REI1P38344 393 aaPredicted RBP5.55□□□□□ -1.52
HSH49YOR319W SHU2P38957 223 aa5.55□□□□□ -1.52
HSH49YOR319W PRP43P53131 767 aaKnown RBP5.55□□□□□ -1.52
HSH49YOR319W VPS35P34110 944 aa5.54□□□□□ -1.52
HSH49YOR319W MGE1P38523 228 aa5.54□□□□□ -1.52
HSH49YOR319W RCM1P53972 490 aa5.54□□□□□ -1.52
HSH49YOR319W YOR059CQ08448 450 aaKnown RBP5.54□□□□□ -1.52
HSH49YOR319W ALG6Q12001 544 aaKnown RBP5.54□□□□□ -1.52
HSH49YOR319W PHO4P07270 312 aaKnown RBP5.53□□□□□ -1.52
HSH49YOR319W GAS1P22146 559 aaKnown RBP5.53□□□□□ -1.52
HSH49YOR319W ARL1P38116 183 aaKnown RBP5.53□□□□□ -1.52
HSH49YOR319W YTA7P40340 1379 aa5.53□□□□□ -1.52
HSH49YOR319W NAP1P25293 417 aaKnown RBP5.52□□□□□ -1.53
HSH49YOR319W YJR107WP47145 328 aa5.52□□□□□ -1.53
HSH49YOR319W AVO1Q08236 1176 aa5.52□□□□□ -1.53
HSH49YOR319W TY1A-LR4P0C2I8 440 aaKnown RBP5.51□□□□□ -1.53
HSH49YOR319W TY1A-DR6P0CX70 440 aa5.51□□□□□ -1.53
HSH49YOR319W TY1A-ER1P0CX71 440 aa5.51□□□□□ -1.53
HSH49YOR319W TY1A-LR2P0CX72 440 aa5.51□□□□□ -1.53
HSH49YOR319W TY1A-PLP0CX73 440 aa5.51□□□□□ -1.53
HSH49YOR319W TY1A-JR1P0CX74 440 aa5.51□□□□□ -1.53
HSH49YOR319W TY1A-LR3P0CX75 440 aa5.51□□□□□ -1.53
HSH49YOR319W TY1A-ML2P0CX76 440 aa5.51□□□□□ -1.53
HSH49YOR319W KAR2P16474 682 aaKnown RBP5.51□□□□□ -1.53
HSH49YOR319W MET4P32389 672 aa5.51□□□□□ -1.53
HSH49YOR319W HSP78P33416 811 aa5.51□□□□□ -1.53
HSH49YOR319W YKL222CP35995 705 aa5.51□□□□□ -1.53
HSH49YOR319W OYE2Q03558 400 aaKnown RBP5.51□□□□□ -1.53
HSH49YOR319W OXR1Q08952 273 aa5.51□□□□□ -1.53
HSH49YOR319W TY1A-GR1Q12085 440 aa5.51□□□□□ -1.53
HSH49YOR319W TY1A-PR3Q6Q5H1 440 aaKnown RBP5.51□□□□□ -1.53
HSH49YOR319W TY1A-OLQ92392 440 aaKnown RBP5.51□□□□□ -1.53
HSH49YOR319W PRP40P33203 583 aaKnown RBP5.5□□□□□ -1.53
HSH49YOR319W EXO5P38289 585 aa5.5□□□□□ -1.53
HSH49YOR319W MSH4P40965 878 aaPredicted RBP5.5□□□□□ -1.53
HSH49YOR319W DAL4Q04895 635 aa5.5□□□□□ -1.53
HSH49YOR319W RPS4AP0CX35 261 aaKnown RBP5.49□□□□□ -1.53
HSH49YOR319W RPS4BP0CX36 261 aaKnown RBP5.49□□□□□ -1.53
HSH49YOR319W SEC8P32855 1065 aa5.49□□□□□ -1.53
HSH49YOR319W OYE3P41816 400 aaPredicted RBP5.49□□□□□ -1.53
HSH49YOR319W DAK2P43550 591 aa5.49□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 82.3 ms