RNA–Protein interactions for RNA: YOR068C

VAM10, Transcript of Protein involved in vacuole morphogenesis, yeast

Gene VAM10, Length 345 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAM10	YOR068C	PAN5	P38787	379 aa		4.58	□□□□□ -1.68
VAM10	YOR068C	PEX28	P38848	579 aa		4.58	□□□□□ -1.68
VAM10	YOR068C	GIP2	P40036	548 aa		4.58	□□□□□ -1.68
VAM10	YOR068C	TY1A-GR1	Q12085	440 aa		4.58	□□□□□ -1.68
VAM10	YOR068C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.58	□□□□□ -1.68
VAM10	YOR068C	TY1A-OL	Q92392	440 aa	Known RBP	4.58	□□□□□ -1.68
VAM10	YOR068C	HEM13	P11353	328 aa	Known RBP	4.57	□□□□□ -1.68
VAM10	YOR068C	SEC23	P15303	768 aa	Known RBP	4.57	□□□□□ -1.68
VAM10	YOR068C	MSH3	P25336	1018 aa		4.57	□□□□□ -1.68
VAM10	YOR068C	EXO5	P38289	585 aa		4.57	□□□□□ -1.68
VAM10	YOR068C	XKS1	P42826	600 aa		4.57	□□□□□ -1.68
VAM10	YOR068C	NNF1	P47149	201 aa		4.57	□□□□□ -1.68
VAM10	YOR068C	PEX13	P80667	386 aa		4.57	□□□□□ -1.68
VAM10	YOR068C	YPL062W	Q02781	134 aa		4.57	□□□□□ -1.68
VAM10	YOR068C	PIN2	Q12057	282 aa		4.57	□□□□□ -1.68
VAM10	YOR068C	SLP1	Q12232	587 aa		4.57	□□□□□ -1.68
VAM10	YOR068C	DUT1	P33317	147 aa		4.56	□□□□□ -1.68
VAM10	YOR068C	MNR2	P35724	969 aa		4.56	□□□□□ -1.68
VAM10	YOR068C	MAD1	P40957	749 aa		4.56	□□□□□ -1.68
VAM10	YOR068C	SBE2	P42223	864 aa	Known RBP	4.56	□□□□□ -1.68
VAM10	YOR068C	LEM3	P42838	414 aa		4.56	□□□□□ -1.68
VAM10	YOR068C	GNP1	P48813	663 aa		4.56	□□□□□ -1.68
VAM10	YOR068C	YGL140C	P53120	1219 aa		4.56	□□□□□ -1.68
VAM10	YOR068C	YIG1	Q08956	461 aa		4.56	□□□□□ -1.68
VAM10	YOR068C	NHA1	Q99271	985 aa		4.56	□□□□□ -1.68
VAM10	YOR068C	GCR1	P07261	785 aa		4.55	□□□□□ -1.68
VAM10	YOR068C	SHU2	P38957	223 aa		4.55	□□□□□ -1.68
VAM10	YOR068C	POL5	P39985	1022 aa	Known RBP	4.55	□□□□□ -1.68
VAM10	YOR068C	UTP22	P53254	1237 aa	Predicted RBP	4.55	□□□□□ -1.68
VAM10	YOR068C	ALD6	P54115	500 aa	Known RBP	4.55	□□□□□ -1.68
VAM10	YOR068C	SPO71	Q03868	1245 aa		4.55	□□□□□ -1.68
VAM10	YOR068C	AI1	P03875	834 aa		4.54	□□□□□ -1.68
VAM10	YOR068C	CDC34	P14682	295 aa		4.54	□□□□□ -1.68
VAM10	YOR068C	CLN2	P20438	545 aa		4.54	□□□□□ -1.68
VAM10	YOR068C	TRK2	P28584	889 aa		4.54	□□□□□ -1.68
VAM10	YOR068C	RDH54	P38086	958 aa		4.54	□□□□□ -1.68
VAM10	YOR068C	NEM1	P38757	446 aa		4.54	□□□□□ -1.68
VAM10	YOR068C	HDA2	Q06629	674 aa		4.54	□□□□□ -1.68
VAM10	YOR068C	MRL1	Q06815	381 aa		4.54	□□□□□ -1.68
VAM10	YOR068C	REC8	Q12188	680 aa		4.54	□□□□□ -1.68
VAM10	YOR068C	YTA7	P40340	1379 aa		4.53	□□□□□ -1.68
VAM10	YOR068C	TY4B-P	A0A0B7P3V8	1104 aa		4.53	□□□□□ -1.68
VAM10	YOR068C	ERS1	P17261	260 aa		4.53	□□□□□ -1.68
VAM10	YOR068C	YKL077W	P36081	392 aa		4.53	□□□□□ -1.68
VAM10	YOR068C	VAC8	P39968	578 aa		4.53	□□□□□ -1.68
VAM10	YOR068C	SLS1	P42900	643 aa		4.53	□□□□□ -1.68
VAM10	YOR068C	YFL066C	P43538	392 aa		4.53	□□□□□ -1.68
VAM10	YOR068C	FAA4	P47912	694 aa	Known RBP	4.53	□□□□□ -1.68
VAM10	YOR068C	ELG1	Q12050	791 aa		4.53	□□□□□ -1.68
VAM10	YOR068C	TY4A-H	Q6Q5P6	413 aa		4.53	□□□□□ -1.68
VAM10	YOR068C	SAC7	P17121	654 aa		4.52	□□□□□ -1.69
VAM10	YOR068C	MNN4	P36044	1178 aa		4.52	□□□□□ -1.69
VAM10	YOR068C	HXT13	P39924	564 aa		4.52	□□□□□ -1.69
VAM10	YOR068C	BOI2	P39969	1040 aa		4.52	□□□□□ -1.69
VAM10	YOR068C	GCV1	P48015	400 aa		4.52	□□□□□ -1.69
VAM10	YOR068C	HXT17	P53631	564 aa		4.52	□□□□□ -1.69
VAM10	YOR068C	YNR014W	P53719	212 aa		4.52	□□□□□ -1.69
VAM10	YOR068C	HXT15	P54854	567 aa		4.52	□□□□□ -1.69
VAM10	YOR068C	MEC3	Q02574	474 aa		4.52	□□□□□ -1.69
VAM10	YOR068C	UTP5	Q04177	643 aa	Known RBP	4.52	□□□□□ -1.69
VAM10	YOR068C	RTT10	Q08924	1013 aa		4.52	□□□□□ -1.69
VAM10	YOR068C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.51	□□□□□ -1.69	not detected
VAM10	YOR068C	TAF13	P11747	167 aa		4.51	□□□□□ -1.69
VAM10	YOR068C	VMA4	P22203	233 aa	Known RBP	4.51	□□□□□ -1.69
VAM10	YOR068C	RRM3	P38766	723 aa		4.51	□□□□□ -1.69
VAM10	YOR068C	SIW14	P53965	281 aa		4.51	□□□□□ -1.69
VAM10	YOR068C	ROD1	Q02805	837 aa		4.51	□□□□□ -1.69
VAM10	YOR068C	EEB1	Q02891	456 aa		4.51	□□□□□ -1.69
VAM10	YOR068C	FPR4	Q06205	392 aa	Predicted RBP	4.51	□□□□□ -1.69
VAM10	YOR068C	GAS5	Q08193	484 aa		4.51	□□□□□ -1.69
VAM10	YOR068C	MAE1	P36013	669 aa	Known RBP	4.5	□□□□□ -1.69
VAM10	YOR068C	CWC24	P53769	259 aa		4.5	□□□□□ -1.69
VAM10	YOR068C	GDE1	Q02979	1223 aa		4.5	□□□□□ -1.69
VAM10	YOR068C	TDA6	Q06466	467 aa		4.5	□□□□□ -1.69
VAM10	YOR068C	THI72	Q08579	599 aa		4.5	□□□□□ -1.69
VAM10	YOR068C	ALG6	Q12001	544 aa	Known RBP	4.5	□□□□□ -1.69
VAM10	YOR068C	TY1A-NL1	Q12391	440 aa	Known RBP	4.5	□□□□□ -1.69
VAM10	YOR068C	DED1	P06634	604 aa	Known RBP	4.49	□□□□□ -1.69
VAM10	YOR068C	MDJ1	P35191	511 aa		4.49	□□□□□ -1.69
VAM10	YOR068C	ARL1	P38116	183 aa	Known RBP	4.49	□□□□□ -1.69
VAM10	YOR068C	REI1	P38344	393 aa	Predicted RBP	4.49	□□□□□ -1.69
VAM10	YOR068C	OCA5	P38738	679 aa		4.49	□□□□□ -1.69
VAM10	YOR068C	SPO74	P45819	413 aa		4.49	□□□□□ -1.69
VAM10	YOR068C	MTR4	P47047	1073 aa	Known RBP	4.49	□□□□□ -1.69
VAM10	YOR068C	KIP3	P53086	805 aa	Known RBP	4.49	□□□□□ -1.69
VAM10	YOR068C	YGR053C	P53234	283 aa		4.49	□□□□□ -1.69
VAM10	YOR068C	DSE4	P53753	1117 aa		4.49	□□□□□ -1.69
VAM10	YOR068C	FAR11	P53917	953 aa		4.49	□□□□□ -1.69
VAM10	YOR068C	YMR074C	Q04773	145 aa		4.49	□□□□□ -1.69
VAM10	YOR068C	SSF2	Q12153	453 aa	Predicted RBP	4.49	□□□□□ -1.69
VAM10	YOR068C	MCX1	P38323	520 aa	Predicted RBP	4.48	□□□□□ -1.69
VAM10	YOR068C	ENT3	P47160	408 aa		4.48	□□□□□ -1.69
VAM10	YOR068C	BUD9	P53226	547 aa		4.48	□□□□□ -1.69
VAM10	YOR068C	NSG2	P53898	299 aa		4.48	□□□□□ -1.69
VAM10	YOR068C	EST2	Q06163	884 aa		4.48	□□□□□ -1.69
VAM10	YOR068C	TRP2	P00899	507 aa	Known RBP	4.47	□□□□□ -1.69
VAM10	YOR068C	MKK2	P32491	506 aa		4.47	□□□□□ -1.69
VAM10	YOR068C	AFG2	P32794	780 aa		4.47	□□□□□ -1.69
VAM10	YOR068C	RER2	P35196	286 aa		4.47	□□□□□ -1.69
VAM10	YOR068C	BRN1	P38170	754 aa		4.47	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 9 ms