RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeastyeast

Gene SHR5, Length 714 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR5YOL110W PEX14P53112 341 aa16.61■□□□□ 0.25
SHR5YOL110W FOL1P53848 824 aa16.61■□□□□ 0.25
SHR5YOL110W VPS30Q02948 557 aa16.61■□□□□ 0.25
SHR5YOL110W YLR407WQ06070 228 aa16.61■□□□□ 0.25
SHR5YOL110W ISW2Q08773 1120 aa16.61■□□□□ 0.25
SHR5YOL110W ELG1Q12050 791 aa16.61■□□□□ 0.25
SHR5YOL110W ACA1P39970 489 aa16.6■□□□□ 0.25
SHR5YOL110W HCA4P20448 770 aaKnown RBP16.59■□□□□ 0.25
SHR5YOL110W BMH2P34730 273 aaKnown RBP16.59■□□□□ 0.25
SHR5YOL110W YIL089WP40500 205 aa16.59■□□□□ 0.25
SHR5YOL110W YGL081WP53156 320 aa16.59■□□□□ 0.25
SHR5YOL110W TUS1Q06412 1307 aa16.59■□□□□ 0.25
SHR5YOL110W RRT6P53117 311 aaPredicted RBP16.58■□□□□ 0.24
SHR5YOL110W GIN4Q12263 1142 aa16.58■□□□□ 0.24
SHR5YOL110W CPA2P03965 1118 aaKnown RBP16.57■□□□□ 0.24
SHR5YOL110W DIT2P21595 489 aa16.57■□□□□ 0.24
SHR5YOL110W PRX1P34227 261 aaKnown RBP16.57■□□□□ 0.24
SHR5YOL110W RPN10P38886 268 aaKnown RBP16.57■□□□□ 0.24
SHR5YOL110W EAF7P53911 425 aaKnown RBP16.57■□□□□ 0.24
SHR5YOL110W NUC1P08466 329 aa16.56■□□□□ 0.24
SHR5YOL110W SAM2P19358 384 aaKnown RBP16.56■□□□□ 0.24
SHR5YOL110W PNT1P38969 423 aa16.56■□□□□ 0.24
SHR5YOL110W TIF4631P39935 952 aaKnown RBP16.56■□□□□ 0.24
SHR5YOL110W HRQ1Q05549 1077 aa16.56■□□□□ 0.24
SHR5YOL110W YPL150WQ12152 901 aa16.56■□□□□ 0.24
SHR5YOL110W ERG12P07277 443 aa16.55■□□□□ 0.24
SHR5YOL110W CBP3P21560 335 aa16.55■□□□□ 0.24
SHR5YOL110W SWI4P25302 1093 aaKnown RBP16.55■□□□□ 0.24
SHR5YOL110W VPS45P38932 577 aa16.55■□□□□ 0.24
SHR5YOL110W UBP9P39967 754 aa16.55■□□□□ 0.24
SHR5YOL110W TYW1Q08960 810 aaKnown RBP16.55■□□□□ 0.24
SHR5YOL110W RFC5P38251 354 aa16.54■□□□□ 0.24
SHR5YOL110W DJP1P40564 432 aa16.54■□□□□ 0.24
SHR5YOL110W GDE1Q02979 1223 aa16.54■□□□□ 0.24
SHR5YOL110W YDR341CQ05506 607 aaKnown RBP16.54■□□□□ 0.24
SHR5YOL110W CIT1P00890 479 aa16.53■□□□□ 0.24
SHR5YOL110W RXT2P38255 430 aa16.53■□□□□ 0.24
SHR5YOL110W TOM71P38825 639 aaKnown RBP16.53■□□□□ 0.24
SHR5YOL110W BDH2P39713 417 aa16.53■□□□□ 0.24
SHR5YOL110W SUB2Q07478 446 aaKnown RBP16.53■□□□□ 0.24
SHR5YOL110W HSP82P02829 709 aaKnown RBP16.52■□□□□ 0.24
SHR5YOL110W SRP54P20424 541 aaKnown RBP16.52■□□□□ 0.24
SHR5YOL110W SPB4P25808 606 aaPredicted RBP16.52■□□□□ 0.24
SHR5YOL110W HST1P53685 503 aa16.52■□□□□ 0.24
SHR5YOL110W MDM1Q01846 1127 aa16.52■□□□□ 0.24
SHR5YOL110W PEX29Q03370 554 aa16.52■□□□□ 0.24
SHR5YOL110W DSE3Q08729 430 aa16.52■□□□□ 0.24
SHR5YOL110W KRS1P15180 591 aaKnown RBP16.51■□□□□ 0.23
SHR5YOL110W SEC20P28791 383 aa16.51■□□□□ 0.23
SHR5YOL110W MET6P05694 767 aaKnown RBP16.5■□□□□ 0.23
SHR5YOL110W OCT1P35999 772 aa16.5■□□□□ 0.23
SHR5YOL110W PCI8P40512 444 aa16.5■□□□□ 0.23
SHR5YOL110W SOL4P53315 255 aa16.5■□□□□ 0.23
SHR5YOL110W LSB1P53281 241 aa16.49■□□□□ 0.23
SHR5YOL110W ASF1P32447 279 aa16.48■□□□□ 0.23
SHR5YOL110W MAL33P38157 468 aa16.48■□□□□ 0.23
SHR5YOL110W LYS14P40971 790 aa16.48■□□□□ 0.23
SHR5YOL110W PIL1P53252 339 aaKnown RBP16.48■□□□□ 0.23
SHR5YOL110W PGI1P12709 554 aaKnown RBP16.47■□□□□ 0.23
SHR5YOL110W PCS60P38137 543 aaKnown RBP RIP-Chip data16.47■□□□□ 0.23 RIP-Chip
SHR5YOL110W TPM2P40414 161 aa16.47■□□□□ 0.23
SHR5YOL110W NAF1P53919 492 aaKnown RBP16.47■□□□□ 0.23
SHR5YOL110W COG8Q04632 607 aa16.47■□□□□ 0.23
SHR5YOL110W RDS1P25611 832 aa16.46■□□□□ 0.23
SHR5YOL110W HYR1P40581 163 aaKnown RBP16.46■□□□□ 0.23
SHR5YOL110W YML037CQ03703 340 aa16.46■□□□□ 0.23
SHR5YOL110W PEX19Q07418 342 aa16.46■□□□□ 0.23
SHR5YOL110W CEX1Q12453 761 aa16.46■□□□□ 0.23
SHR5YOL110W MYO1P08964 1928 aa16.45■□□□□ 0.22
SHR5YOL110W CDC6P09119 513 aa16.45■□□□□ 0.22
SHR5YOL110W STI1P15705 589 aaKnown RBP RIP-Chip data16.45■□□□□ 0.22not detected
SHR5YOL110W MSP1P28737 362 aa16.45■□□□□ 0.22
SHR5YOL110W VIP1Q06685 1146 aaKnown RBP16.45■□□□□ 0.22
SHR5YOL110W FBP1P09201 348 aa16.44■□□□□ 0.22
SHR5YOL110W MAK11P20484 414 aaKnown RBP16.44■□□□□ 0.22
SHR5YOL110W BSD2P38356 321 aa16.44■□□□□ 0.22
SHR5YOL110W VAB2P40003 282 aa16.44■□□□□ 0.22
SHR5YOL110W YGL138CP53122 345 aa16.44■□□□□ 0.22
SHR5YOL110W UTP4Q06679 776 aaKnown RBP16.44■□□□□ 0.22
SHR5YOL110W GET3Q12154 354 aaKnown RBP16.44■□□□□ 0.22
SHR5YOL110W RPL8AP17076 256 aaKnown RBP16.43■□□□□ 0.22
SHR5YOL110W VPS1P21576 704 aaKnown RBP16.43■□□□□ 0.22
SHR5YOL110W PER1P25625 357 aa16.43■□□□□ 0.22
SHR5YOL110W CCT3P39077 534 aaKnown RBP16.43■□□□□ 0.22
SHR5YOL110W FAR11P53917 953 aa16.43■□□□□ 0.22
SHR5YOL110W HAP5Q02516 242 aa16.43■□□□□ 0.22
SHR5YOL110W GIS4Q04233 774 aa16.43■□□□□ 0.22
SHR5YOL110W SUE1Q06524 206 aa16.43■□□□□ 0.22
SHR5YOL110W KEX1P09620 729 aa16.42■□□□□ 0.22
SHR5YOL110W DCS2Q12123 353 aa16.42■□□□□ 0.22
SHR5YOL110W NBL1Q3E7Y6 73 aa16.42■□□□□ 0.22
SHR5YOL110W SAS3P34218 831 aa16.41■□□□□ 0.22
SHR5YOL110W YJL007CP47080 104 aa16.41■□□□□ 0.22
SHR5YOL110W YDJ1P25491 409 aaKnown RBP16.4■□□□□ 0.22
SHR5YOL110W PWP2P25635 923 aaKnown RBP16.4■□□□□ 0.22
SHR5YOL110W MCD4P36051 919 aa16.4■□□□□ 0.22
SHR5YOL110W ASE1P50275 885 aa16.4■□□□□ 0.22
SHR5YOL110W SMD2Q06217 110 aaKnown RBP16.4■□□□□ 0.22
SHR5YOL110W TOM1Q03280 3268 aa16.39■□□□□ 0.21
SHR5YOL110W HVG1P0CE11 249 aa16.39■□□□□ 0.21
Retrieved 100 of 5,963 RNA–protein pairs in 36.5 ms