RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	NEO1	P40527	1151 aa		5.3	□□□□□ -1.56
TPM1	YNL079C	TED1	P40533	473 aa		5.3	□□□□□ -1.56
TPM1	YNL079C	NHA1	Q99271	985 aa		5.3	□□□□□ -1.56
TPM1	YNL079C	TAF2	P23255	1407 aa		5.3	□□□□□ -1.56
TPM1	YNL079C	TY4B-P	A0A0B7P3V8	1104 aa		5.29	□□□□□ -1.56
TPM1	YNL079C	PAN5	P38787	379 aa		5.29	□□□□□ -1.56
TPM1	YNL079C	MET10	P39692	1035 aa		5.29	□□□□□ -1.56
TPM1	YNL079C	PIC2	P40035	300 aa		5.29	□□□□□ -1.56
TPM1	YNL079C	TY4A-H	Q6Q5P6	413 aa		5.29	□□□□□ -1.56
TPM1	YNL079C	SHU2	P38957	223 aa		5.28	□□□□□ -1.56
TPM1	YNL079C	POL5	P39985	1022 aa	Known RBP	5.28	□□□□□ -1.56
TPM1	YNL079C	RSM26	P47141	266 aa		5.28	□□□□□ -1.56
TPM1	YNL079C	SPO71	Q03868	1245 aa		5.28	□□□□□ -1.56
TPM1	YNL079C	ECM5	Q03214	1411 aa		5.28	□□□□□ -1.56
TPM1	YNL079C	MSH3	P25336	1018 aa		5.27	□□□□□ -1.57
TPM1	YNL079C	SQT1	P35184	431 aa		5.27	□□□□□ -1.57
TPM1	YNL079C	EXO5	P38289	585 aa		5.27	□□□□□ -1.57
TPM1	YNL079C	PEX28	P38848	579 aa		5.27	□□□□□ -1.57
TPM1	YNL079C	BOI2	P39969	1040 aa		5.27	□□□□□ -1.57
TPM1	YNL079C	SBE2	P42223	864 aa	Known RBP	5.27	□□□□□ -1.57
TPM1	YNL079C	YFL066C	P43538	392 aa		5.27	□□□□□ -1.57
TPM1	YNL079C	YNR014W	P53719	212 aa		5.27	□□□□□ -1.57
TPM1	YNL079C	PEX13	P80667	386 aa		5.27	□□□□□ -1.57
TPM1	YNL079C	JIP5	Q06214	492 aa	Predicted RBP	5.27	□□□□□ -1.57
TPM1	YNL079C	YIG1	Q08956	461 aa		5.27	□□□□□ -1.57
TPM1	YNL079C	ESP1	Q03018	1630 aa		5.26	□□□□□ -1.57
TPM1	YNL079C	ATG2	P53855	1592 aa		5.26	□□□□□ -1.57
TPM1	YNL079C	NAP1	P25293	417 aa	Known RBP	5.26	□□□□□ -1.57
TPM1	YNL079C	YKL077W	P36081	392 aa		5.26	□□□□□ -1.57
TPM1	YNL079C	UTP22	P53254	1237 aa	Predicted RBP	5.26	□□□□□ -1.57
TPM1	YNL079C	THI72	Q08579	599 aa		5.26	□□□□□ -1.57
TPM1	YNL079C	MYO2	P19524	1574 aa	Known RBP	5.25	□□□□□ -1.57
TPM1	YNL079C	SAC7	P17121	654 aa		5.25	□□□□□ -1.57
TPM1	YNL079C	PET112	P33893	541 aa		5.25	□□□□□ -1.57
TPM1	YNL079C	YGL140C	P53120	1219 aa		5.25	□□□□□ -1.57
TPM1	YNL079C	TY1A-LR4	P0C2I8	440 aa	Known RBP	5.24	□□□□□ -1.57
TPM1	YNL079C	TY1A-DR6	P0CX70	440 aa		5.24	□□□□□ -1.57
TPM1	YNL079C	TY1A-ER1	P0CX71	440 aa		5.24	□□□□□ -1.57
TPM1	YNL079C	TY1A-LR2	P0CX72	440 aa		5.24	□□□□□ -1.57
TPM1	YNL079C	TY1A-PL	P0CX73	440 aa		5.24	□□□□□ -1.57
TPM1	YNL079C	TY1A-JR1	P0CX74	440 aa		5.24	□□□□□ -1.57
TPM1	YNL079C	TY1A-LR3	P0CX75	440 aa		5.24	□□□□□ -1.57
TPM1	YNL079C	TY1A-ML2	P0CX76	440 aa		5.24	□□□□□ -1.57
TPM1	YNL079C	HEM13	P11353	328 aa	Known RBP	5.24	□□□□□ -1.57
TPM1	YNL079C	SEC23	P15303	768 aa	Known RBP	5.24	□□□□□ -1.57
TPM1	YNL079C	MDJ1	P35191	511 aa		5.24	□□□□□ -1.57
TPM1	YNL079C	MNR2	P35724	969 aa		5.24	□□□□□ -1.57
TPM1	YNL079C	RDH54	P38086	958 aa		5.24	□□□□□ -1.57
TPM1	YNL079C	RRM3	P38766	723 aa		5.24	□□□□□ -1.57
TPM1	YNL079C	DSE4	P53753	1117 aa		5.24	□□□□□ -1.57
TPM1	YNL079C	ELG1	Q12050	791 aa		5.24	□□□□□ -1.57
TPM1	YNL079C	TY1A-GR1	Q12085	440 aa		5.24	□□□□□ -1.57
TPM1	YNL079C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	5.24	□□□□□ -1.57
TPM1	YNL079C	TY1A-OL	Q92392	440 aa	Known RBP	5.24	□□□□□ -1.57
TPM1	YNL079C	GCR1	P07261	785 aa		5.23	□□□□□ -1.57
TPM1	YNL079C	ERS1	P17261	260 aa		5.23	□□□□□ -1.57
TPM1	YNL079C	MAE1	P36013	669 aa	Known RBP	5.23	□□□□□ -1.57
TPM1	YNL079C	MCX1	P38323	520 aa	Predicted RBP	5.23	□□□□□ -1.57
TPM1	YNL079C	XKS1	P42826	600 aa		5.23	□□□□□ -1.57
TPM1	YNL079C	GCV1	P48015	400 aa		5.23	□□□□□ -1.57
TPM1	YNL079C	MEC3	Q02574	474 aa		5.23	□□□□□ -1.57
TPM1	YNL079C	MAG2	Q06436	670 aa	Known RBP	5.23	□□□□□ -1.57
TPM1	YNL079C	TDA6	Q06466	467 aa		5.23	□□□□□ -1.57
TPM1	YNL079C	SKI3	P17883	1432 aa	Known RBP	5.23	□□□□□ -1.57
TPM1	YNL079C	TAF13	P11747	167 aa		5.22	□□□□□ -1.57
TPM1	YNL079C	CLN2	P20438	545 aa		5.22	□□□□□ -1.57
TPM1	YNL079C	VMA4	P22203	233 aa	Known RBP	5.22	□□□□□ -1.57
TPM1	YNL079C	ARL1	P38116	183 aa	Known RBP	5.22	□□□□□ -1.57
TPM1	YNL079C	NEM1	P38757	446 aa		5.22	□□□□□ -1.57
TPM1	YNL079C	MAD1	P40957	749 aa		5.22	□□□□□ -1.57
TPM1	YNL079C	SLS1	P42900	643 aa		5.22	□□□□□ -1.57
TPM1	YNL079C	NSG2	P53898	299 aa		5.22	□□□□□ -1.57
TPM1	YNL079C	FAR11	P53917	953 aa		5.22	□□□□□ -1.57
TPM1	YNL079C	VPS16	Q03308	798 aa		5.22	□□□□□ -1.57
TPM1	YNL079C	PIN2	Q12057	282 aa		5.22	□□□□□ -1.57
TPM1	YNL079C	PEP1	P32319	1579 aa		5.21	□□□□□ -1.57
TPM1	YNL079C	MDS3	P53094	1487 aa		5.21	□□□□□ -1.58
TPM1	YNL079C	BUD9	P53226	547 aa		5.21	□□□□□ -1.58
TPM1	YNL079C	UTP5	Q04177	643 aa	Known RBP	5.21	□□□□□ -1.58
TPM1	YNL079C	HDA2	Q06629	674 aa		5.21	□□□□□ -1.58
TPM1	YNL079C	RTT10	Q08924	1013 aa		5.21	□□□□□ -1.58
TPM1	YNL079C	TY1A-NL1	Q12391	440 aa	Known RBP	5.21	□□□□□ -1.58
TPM1	YNL079C	YPK9	Q12697	1472 aa		5.2	□□□□□ -1.58
TPM1	YNL079C	CDC34	P14682	295 aa		5.2	□□□□□ -1.58
TPM1	YNL079C	DUT1	P33317	147 aa		5.2	□□□□□ -1.58
TPM1	YNL079C	REI1	P38344	393 aa	Predicted RBP	5.2	□□□□□ -1.58
TPM1	YNL079C	GNP1	P48813	663 aa		5.2	□□□□□ -1.58
TPM1	YNL079C	KIP3	P53086	805 aa	Known RBP	5.2	□□□□□ -1.58
TPM1	YNL079C	YMR074C	Q04773	145 aa		5.2	□□□□□ -1.58
TPM1	YNL079C	MRL1	Q06815	381 aa		5.2	□□□□□ -1.58
TPM1	YNL079C	GAS5	Q08193	484 aa		5.2	□□□□□ -1.58
TPM1	YNL079C	REC8	Q12188	680 aa		5.2	□□□□□ -1.58
TPM1	YNL079C	YLL054C	Q12244	843 aa		5.2	□□□□□ -1.58
TPM1	YNL079C	SFA1	P32771	386 aa		5.19	□□□□□ -1.58
TPM1	YNL079C	MTR4	P47047	1073 aa	Known RBP	5.19	□□□□□ -1.58
TPM1	YNL079C	AI3	P03877	415 aa		5.18	□□□□□ -1.58
TPM1	YNL079C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	5.18	□□□□□ -1.58	RIP-Chip
TPM1	YNL079C	HXT13	P39924	564 aa		5.18	□□□□□ -1.58
TPM1	YNL079C	HXT17	P53631	564 aa		5.18	□□□□□ -1.58
TPM1	YNL079C	SIW14	P53965	281 aa		5.18	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 123.2 ms