RNA–Protein interactions for RNA: YML097C

VPS9, Transcript of Guanine nucleotide exchange factor (GEF), yeastyeast

Gene VPS9, Length 1,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS9YML097C MET6P05694 767 aaKnown RBP4.53□□□□□ -1.69
VPS9YML097C GCR1P07261 785 aa4.53□□□□□ -1.69
VPS9YML097C SQT1P35184 431 aa4.53□□□□□ -1.69
VPS9YML097C YKL069WP36088 180 aa4.53□□□□□ -1.69
VPS9YML097C TAT1P38085 619 aa4.53□□□□□ -1.69
VPS9YML097C MSN5P52918 1224 aa4.53□□□□□ -1.69
VPS9YML097C ADI1Q03677 179 aa4.53□□□□□ -1.69
VPS9YML097C POB3Q04636 552 aaKnown RBP4.53□□□□□ -1.69
VPS9YML097C EMG1Q06287 252 aaKnown RBP4.53□□□□□ -1.69
VPS9YML097C RPC31P17890 251 aa4.52□□□□□ -1.69
VPS9YML097C PDC6P26263 563 aaKnown RBP4.52□□□□□ -1.69
VPS9YML097C PYC2P32327 1180 aaKnown RBP4.52□□□□□ -1.69
VPS9YML097C MCX1P38323 520 aaPredicted RBP4.52□□□□□ -1.69
VPS9YML097C PIC2P40035 300 aa4.52□□□□□ -1.69
VPS9YML097C BUD6P41697 788 aa4.52□□□□□ -1.69
VPS9YML097C XKS1P42826 600 aa4.52□□□□□ -1.69
VPS9YML097C NUT1P53114 1132 aa4.52□□□□□ -1.69
VPS9YML097C CTR9P89105 1077 aa4.52□□□□□ -1.69
VPS9YML097C CUS1Q02554 436 aaPredicted RBP4.52□□□□□ -1.69
VPS9YML097C PSH1Q12161 406 aa4.52□□□□□ -1.69
VPS9YML097C YDR215CQ12240 137 aa4.52□□□□□ -1.69
VPS9YML097C COBP00163 385 aa4.51□□□□□ -1.69
VPS9YML097C TIM23P32897 222 aa4.51□□□□□ -1.69
VPS9YML097C DUT1P33317 147 aa4.51□□□□□ -1.69
VPS9YML097C SPF1P39986 1215 aaKnown RBP4.51□□□□□ -1.69
VPS9YML097C NUP82P40368 713 aa4.51□□□□□ -1.69
VPS9YML097C YJR008WP47085 338 aa4.51□□□□□ -1.69
VPS9YML097C TYW3P53177 273 aa4.51□□□□□ -1.69
VPS9YML097C RTT10Q08924 1013 aa4.51□□□□□ -1.69
VPS9YML097C TY1A-DR3Q12441 440 aa4.51□□□□□ -1.69
VPS9YML097C YDR461C-AQ2V2P7 80 aa4.51□□□□□ -1.69
VPS9YML097C FPS1P23900 669 aa4.5□□□□□ -1.69
VPS9YML097C RAD27P26793 382 aa4.5□□□□□ -1.69
VPS9YML097C DUR3P33413 735 aa4.5□□□□□ -1.69
VPS9YML097C TAT2P38967 592 aa4.5□□□□□ -1.69
VPS9YML097C MNN1P39106 762 aa4.5□□□□□ -1.69
VPS9YML097C ALO1P54783 526 aaKnown RBP4.5□□□□□ -1.69
VPS9YML097C PEX13P80667 386 aa4.5□□□□□ -1.69
VPS9YML097C YGR161W-CQ3E744 92 aa4.5□□□□□ -1.69
VPS9YML097C RVS167P39743 482 aaKnown RBP4.49□□□□□ -1.69
VPS9YML097C YIL165CP40446 119 aa4.49□□□□□ -1.69
VPS9YML097C YGR053CP53234 283 aa4.49□□□□□ -1.69
VPS9YML097C YGR125WP53273 1036 aa4.49□□□□□ -1.69
VPS9YML097C GPM1P00950 247 aaKnown RBP4.48□□□□□ -1.69
VPS9YML097C PHO8P11491 566 aa4.48□□□□□ -1.69
VPS9YML097C SLA1P32790 1244 aa4.48□□□□□ -1.69
VPS9YML097C PRY1P47032 299 aa4.48□□□□□ -1.69
VPS9YML097C ITC1P53125 1264 aa4.48□□□□□ -1.69
VPS9YML097C PMT7Q06644 662 aa4.48□□□□□ -1.69
VPS9YML097C FLC1Q08967 793 aa4.48□□□□□ -1.69
VPS9YML097C OSH2Q12451 1283 aa4.48□□□□□ -1.69
VPS9YML097C LEU1P07264 779 aaKnown RBP4.47□□□□□ -1.69
VPS9YML097C RGP1P16664 663 aa4.47□□□□□ -1.69
VPS9YML097C THI4P32318 326 aa4.47□□□□□ -1.69
VPS9YML097C YBR184WP38299 523 aa4.47□□□□□ -1.69
VPS9YML097C APM2P38700 605 aa4.47□□□□□ -1.69
VPS9YML097C PEX28P38848 579 aa4.47□□□□□ -1.69
VPS9YML097C YJL181WP46987 611 aa4.47□□□□□ -1.69
VPS9YML097C YJR142WP47173 342 aa4.47□□□□□ -1.69
VPS9YML097C YNR040WP53736 256 aa4.47□□□□□ -1.69
VPS9YML097C EEB1Q02891 456 aa4.47□□□□□ -1.69
VPS9YML097C TMA46Q12000 345 aaKnown RBP4.47□□□□□ -1.69
VPS9YML097C ABD1P32783 436 aaPredicted RBP4.46□□□□□ -1.7
VPS9YML097C NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
VPS9YML097C MSH6Q03834 1242 aa4.46□□□□□ -1.7
VPS9YML097C ESC2Q06340 456 aa4.46□□□□□ -1.7
VPS9YML097C SPO75Q07798 868 aa4.46□□□□□ -1.7
VPS9YML097C DED1P06634 604 aaKnown RBP4.45□□□□□ -1.7
VPS9YML097C ERR1P0CX10 437 aa4.45□□□□□ -1.7
VPS9YML097C ERR2P0CX11 437 aa4.45□□□□□ -1.7
VPS9YML097C TOM20P35180 183 aa4.45□□□□□ -1.7
VPS9YML097C RSP5P39940 809 aaKnown RBP4.45□□□□□ -1.7
VPS9YML097C PPT1P53043 513 aa4.45□□□□□ -1.7
VPS9YML097C SPO20Q04359 397 aa4.45□□□□□ -1.7
VPS9YML097C HDA2Q06629 674 aa4.45□□□□□ -1.7
VPS9YML097C PPM2Q08282 695 aa4.45□□□□□ -1.7
VPS9YML097C YLR125WQ12138 136 aa4.45□□□□□ -1.7
VPS9YML097C TRP2P00899 507 aaKnown RBP4.44□□□□□ -1.7
VPS9YML097C GAL11P19659 1081 aa4.44□□□□□ -1.7
VPS9YML097C HSP60P19882 572 aaKnown RBP4.44□□□□□ -1.7
VPS9YML097C MSH3P25336 1018 aa4.44□□□□□ -1.7
VPS9YML097C ARE1P25628 610 aa4.44□□□□□ -1.7
VPS9YML097C MOT2P34909 587 aaKnown RBP4.44□□□□□ -1.7
VPS9YML097C NCL1P38205 684 aaKnown RBP4.44□□□□□ -1.7
VPS9YML097C YHR020WP38708 688 aaKnown RBP4.44□□□□□ -1.7
VPS9YML097C CHZ1P40019 153 aaPredicted RBP4.44□□□□□ -1.7
VPS9YML097C MSH4P40965 878 aaPredicted RBP4.44□□□□□ -1.7
VPS9YML097C SKP1P52286 194 aa4.44□□□□□ -1.7
VPS9YML097C YGL140CP53120 1219 aa4.44□□□□□ -1.7
VPS9YML097C RTS3P53289 263 aa4.44□□□□□ -1.7
VPS9YML097C YLR225CQ05948 407 aaKnown RBP4.44□□□□□ -1.7
VPS9YML097C CMR1Q12510 522 aaKnown RBP4.44□□□□□ -1.7
VPS9YML097C NPR1P22211 790 aa4.43□□□□□ -1.7
VPS9YML097C STE5P32917 917 aa4.43□□□□□ -1.7
VPS9YML097C OMA1P36163 345 aa4.43□□□□□ -1.7
VPS9YML097C MRPL16P38064 232 aa4.43□□□□□ -1.7
VPS9YML097C UBX5Q06682 500 aa4.43□□□□□ -1.7
VPS9YML097C SSB1P11484 613 aaKnown RBP4.42□□□□□ -1.7
VPS9YML097C SRM1P21827 482 aa4.42□□□□□ -1.7
VPS9YML097C RPL8BP29453 256 aaKnown RBP4.42□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms