RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC22	YLR268W	MSH4	P40965	878 aa	Predicted RBP	5.06	□□□□□ -1.6
SEC22	YLR268W	RSC4	Q02206	625 aa		5.06	□□□□□ -1.6
SEC22	YLR268W	PRP6	P19735	899 aa	Predicted RBP	5.05	□□□□□ -1.6
SEC22	YLR268W	GIP4	P39732	760 aa		5.05	□□□□□ -1.6
SEC22	YLR268W	TAF1	P46677	1066 aa		5.05	□□□□□ -1.6
SEC22	YLR268W	UFD2	P54860	961 aa		5.05	□□□□□ -1.6
SEC22	YLR268W	MSH6	Q03834	1242 aa		5.05	□□□□□ -1.6
SEC22	YLR268W	TRE1	Q08919	783 aa		5.05	□□□□□ -1.6
SEC22	YLR268W	YVC1	Q12324	675 aa		5.04	□□□□□ -1.6
SEC22	YLR268W	LPX1	Q12405	387 aa	Known RBP	5.04	□□□□□ -1.6
SEC22	YLR268W	ECM2	P38241	364 aa	Known RBP	5.03	□□□□□ -1.6
SEC22	YLR268W	REI1	P38344	393 aa	Predicted RBP	5.03	□□□□□ -1.6
SEC22	YLR268W	PEX7	P39108	375 aa		5.03	□□□□□ -1.6
SEC22	YLR268W	UTP22	P53254	1237 aa	Predicted RBP	5.03	□□□□□ -1.6
SEC22	YLR268W	SSY1	Q03770	852 aa		5.03	□□□□□ -1.6
SEC22	YLR268W	DUR3	P33413	735 aa		5.02	□□□□□ -1.61
SEC22	YLR268W	ARL1	P38116	183 aa	Known RBP	5.02	□□□□□ -1.61
SEC22	YLR268W	SAP155	P43612	1002 aa		5.02	□□□□□ -1.61
SEC22	YLR268W	HDA2	Q06629	674 aa		5.02	□□□□□ -1.61
SEC22	YLR268W	SMY2	P32909	740 aa	Known RBP	5.01	□□□□□ -1.61
SEC22	YLR268W	EAR1	Q03212	550 aa		5.01	□□□□□ -1.61
SEC22	YLR268W	FLR1	P38124	548 aa		5	□□□□□ -1.61
SEC22	YLR268W	NFS1	P25374	497 aa		4.99	□□□□□ -1.61
SEC22	YLR268W	NNK1	P36003	928 aa		4.99	□□□□□ -1.61
SEC22	YLR268W	ALG6	Q12001	544 aa	Known RBP	4.99	□□□□□ -1.61
SEC22	YLR268W	PRO1	P32264	428 aa		4.98	□□□□□ -1.61
SEC22	YLR268W	RIM8	P53179	542 aa		4.98	□□□□□ -1.61
SEC22	YLR268W	YGR045C	P53229	120 aa		4.98	□□□□□ -1.61
SEC22	YLR268W	PMT7	Q06644	662 aa		4.97	□□□□□ -1.61
SEC22	YLR268W	GLO3	P38682	493 aa	Known RBP	4.96	□□□□□ -1.62
SEC22	YLR268W	QDR1	P40475	563 aa		4.96	□□□□□ -1.62
SEC22	YLR268W	ELA1	P53861	379 aa	Predicted RBP	4.96	□□□□□ -1.62
SEC22	YLR268W	MRPL22	P53881	309 aa		4.96	□□□□□ -1.62
SEC22	YLR268W	YDL177C	Q12257	170 aa		4.96	□□□□□ -1.62
SEC22	YLR268W	FLP1	P03870	423 aa		4.95	□□□□□ -1.62
SEC22	YLR268W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.95	□□□□□ -1.62
SEC22	YLR268W	TY1A-DR6	P0CX70	440 aa		4.95	□□□□□ -1.62
SEC22	YLR268W	TY1A-ER1	P0CX71	440 aa		4.95	□□□□□ -1.62
SEC22	YLR268W	TY1A-LR2	P0CX72	440 aa		4.95	□□□□□ -1.62
SEC22	YLR268W	TY1A-PL	P0CX73	440 aa		4.95	□□□□□ -1.62
SEC22	YLR268W	TY1A-JR1	P0CX74	440 aa		4.95	□□□□□ -1.62
SEC22	YLR268W	TY1A-LR3	P0CX75	440 aa		4.95	□□□□□ -1.62
SEC22	YLR268W	TY1A-ML2	P0CX76	440 aa		4.95	□□□□□ -1.62
SEC22	YLR268W	AIM3	P38266	947 aa	Known RBP	4.95	□□□□□ -1.62
SEC22	YLR268W	PTC7	P38797	343 aa		4.95	□□□□□ -1.62
SEC22	YLR268W	ATG1	P53104	897 aa		4.95	□□□□□ -1.62
SEC22	YLR268W	YAF9	P53930	226 aa		4.95	□□□□□ -1.62
SEC22	YLR268W	YNL011C	P53980	444 aa		4.95	□□□□□ -1.62
SEC22	YLR268W	BSC2	Q05611	235 aa		4.95	□□□□□ -1.62
SEC22	YLR268W	AVO1	Q08236	1176 aa		4.95	□□□□□ -1.62
SEC22	YLR268W	TY1A-GR1	Q12085	440 aa		4.95	□□□□□ -1.62
SEC22	YLR268W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.95	□□□□□ -1.62
SEC22	YLR268W	TY1A-OL	Q92392	440 aa	Known RBP	4.95	□□□□□ -1.62
SEC22	YLR268W	NUT1	P53114	1132 aa		4.94	□□□□□ -1.62
SEC22	YLR268W	CDC55	Q00362	526 aa		4.94	□□□□□ -1.62
SEC22	YLR268W	GIS1	Q03833	894 aa		4.94	□□□□□ -1.62
SEC22	YLR268W	KAR5	Q04746	504 aa		4.94	□□□□□ -1.62
SEC22	YLR268W	PUS7	Q08647	676 aa	Known RBP	4.94	□□□□□ -1.62
SEC22	YLR268W	SOD2	P00447	233 aa		4.93	□□□□□ -1.62
SEC22	YLR268W	ACF4	P47129	309 aa		4.93	□□□□□ -1.62
SEC22	YLR268W	TRS120	Q04183	1289 aa		4.93	□□□□□ -1.62
SEC22	YLR268W	MNL2	Q12205	849 aa		4.93	□□□□□ -1.62
SEC22	YLR268W	GTS1	P40956	396 aa		4.92	□□□□□ -1.62
SEC22	YLR268W	GSF2	Q04697	403 aa	Known RBP	4.92	□□□□□ -1.62
SEC22	YLR268W	SUB2	Q07478	446 aa	Known RBP	4.92	□□□□□ -1.62
SEC22	YLR268W	YKL077W	P36081	392 aa		4.9	□□□□□ -1.63
SEC22	YLR268W	EXO5	P38289	585 aa		4.9	□□□□□ -1.63
SEC22	YLR268W	RVS167	P39743	482 aa	Known RBP	4.9	□□□□□ -1.63
SEC22	YLR268W	TPP1	Q03796	238 aa		4.9	□□□□□ -1.63
SEC22	YLR268W	SAM35	P14693	329 aa		4.89	□□□□□ -1.63
SEC22	YLR268W	MCM5	P29496	775 aa	Known RBP	4.89	□□□□□ -1.63
SEC22	YLR268W	ETP1	P38748	585 aa	Known RBP	4.89	□□□□□ -1.63
SEC22	YLR268W	SHU2	P38957	223 aa		4.89	□□□□□ -1.63
SEC22	YLR268W	MDL2	P33311	773 aa		4.88	□□□□□ -1.63
SEC22	YLR268W	SNO2	P53823	222 aa		4.88	□□□□□ -1.63
SEC22	YLR268W	YPL277C	Q08989	487 aa		4.88	□□□□□ -1.63
SEC22	YLR268W	RPS13	P05756	151 aa	Known RBP	4.87	□□□□□ -1.63
SEC22	YLR268W	TOD6	P34219	525 aa		4.87	□□□□□ -1.63
SEC22	YLR268W	YHL012W	P38709	493 aa		4.87	□□□□□ -1.63
SEC22	YLR268W	NEM1	P38757	446 aa		4.87	□□□□□ -1.63
SEC22	YLR268W	YAR028W	P39548	234 aa		4.87	□□□□□ -1.63
SEC22	YLR268W	SLS1	P42900	643 aa		4.87	□□□□□ -1.63
SEC22	YLR268W	FOL2	P51601	243 aa	Known RBP	4.87	□□□□□ -1.63
SEC22	YLR268W	CLU1	Q03690	1277 aa	Known RBP	4.87	□□□□□ -1.63
SEC22	YLR268W	INP54	Q08227	384 aa	Known RBP	4.87	□□□□□ -1.63
SEC22	YLR268W	SRO9	P25567	434 aa	Known RBP	4.86	□□□□□ -1.63
SEC22	YLR268W	NOG1	Q02892	647 aa	Known RBP	4.86	□□□□□ -1.63
SEC22	YLR268W	YLR257W	Q06146	321 aa	Known RBP	4.86	□□□□□ -1.63
SEC22	YLR268W	RET1	P22276	1149 aa	Known RBP	4.85	□□□□□ -1.63
SEC22	YLR268W	HSE1	P38753	452 aa		4.85	□□□□□ -1.63
SEC22	YLR268W	MTR4	P47047	1073 aa	Known RBP	4.85	□□□□□ -1.63
SEC22	YLR268W	ENV11	P53246	860 aa		4.85	□□□□□ -1.63
SEC22	YLR268W	RPL34A	P87262	121 aa	Predicted RBP	4.85	□□□□□ -1.63
SEC22	YLR268W	HRK1	Q08732	759 aa	Known RBP	4.85	□□□□□ -1.63
SEC22	YLR268W	YLR358C	O13565	187 aa		4.84	□□□□□ -1.63
SEC22	YLR268W	MON1	P53129	644 aa		4.84	□□□□□ -1.63
SEC22	YLR268W	TRL1	P09880	827 aa	Known RBP	4.83	□□□□□ -1.64
SEC22	YLR268W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
SEC22	YLR268W	ABZ1	P37254	787 aa	Predicted RBP	4.83	□□□□□ -1.64
SEC22	YLR268W	RSA3	Q05942	220 aa	Known RBP	4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 40.1 ms