RNA–Protein interactions for RNA: YLR223C

IFH1, Transcript of Coactivator, regulates transcription of ribosomal protein (RP) genes, yeastyeast

Gene IFH1, Length 3,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IFH1YLR223C YKR073CP36153 106 aa2.45□□□□□ -2.02
IFH1YLR223C YHL050CP38721 697 aa2.45□□□□□ -2.02
IFH1YLR223C HSE1P38753 452 aa2.45□□□□□ -2.02
IFH1YLR223C YHR219WP38900 624 aa2.45□□□□□ -2.02
IFH1YLR223C CIT3P43635 486 aa2.45□□□□□ -2.02
IFH1YLR223C CDC55Q00362 526 aa2.45□□□□□ -2.02
IFH1YLR223C NUT2Q06213 157 aa2.45□□□□□ -2.02
IFH1YLR223C NPR1P22211 790 aa2.44□□□□□ -2.02
IFH1YLR223C GCD6P32501 712 aaKnown RBP2.44□□□□□ -2.02
IFH1YLR223C POL12P38121 705 aaPredicted RBP2.44□□□□□ -2.02
IFH1YLR223C STM1P39015 273 aaKnown RBP2.44□□□□□ -2.02
IFH1YLR223C IRC24P40580 263 aa2.44□□□□□ -2.02
IFH1YLR223C UBP3Q01477 912 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
IFH1YLR223C BRE4Q07660 1125 aa2.44□□□□□ -2.02
IFH1YLR223C RPS4AP0CX35 261 aaKnown RBP2.44□□□□□ -2.02
IFH1YLR223C RPS4BP0CX36 261 aaKnown RBP2.44□□□□□ -2.02
IFH1YLR223C NFS1P25374 497 aa2.44□□□□□ -2.02
IFH1YLR223C YML020WQ03722 664 aa2.44□□□□□ -2.02
IFH1YLR223C NCE103P53615 221 aa2.44□□□□□ -2.02
IFH1YLR223C DAL4Q04895 635 aa2.44□□□□□ -2.02
IFH1YLR223C FLP1P03870 423 aa2.43□□□□□ -2.02
IFH1YLR223C RVS167P39743 482 aaKnown RBP2.43□□□□□ -2.02
IFH1YLR223C RSC4Q02206 625 aa2.43□□□□□ -2.02
IFH1YLR223C MEC3Q02574 474 aa2.43□□□□□ -2.02
IFH1YLR223C YCS4Q06156 1176 aa2.43□□□□□ -2.02
IFH1YLR223C DED1P06634 604 aaKnown RBP2.43□□□□□ -2.02
IFH1YLR223C GCV1P48015 400 aa2.43□□□□□ -2.02
IFH1YLR223C TPP1Q03796 238 aa2.43□□□□□ -2.02
IFH1YLR223C LAP2Q10740 671 aa2.43□□□□□ -2.02
IFH1YLR223C HTS1P07263 546 aaKnown RBP2.43□□□□□ -2.02
IFH1YLR223C PUB1P32588 453 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02 RIP-Chip
IFH1YLR223C MDJ2P42834 146 aa2.43□□□□□ -2.02
IFH1YLR223C NUT1P53114 1132 aa2.43□□□□□ -2.02
IFH1YLR223C YAF9P53930 226 aa2.43□□□□□ -2.02
IFH1YLR223C ADP1P25371 1049 aa2.42□□□□□ -2.02
IFH1YLR223C PRO1P32264 428 aa2.42□□□□□ -2.02
IFH1YLR223C KTR2P33550 425 aa2.42□□□□□ -2.02
IFH1YLR223C SSF1P38789 453 aaPredicted RBP2.42□□□□□ -2.02
IFH1YLR223C YOR059CQ08448 450 aaKnown RBP2.42□□□□□ -2.02
IFH1YLR223C CMR1Q12510 522 aaKnown RBP2.42□□□□□ -2.02
IFH1YLR223C SEC20P28791 383 aa2.42□□□□□ -2.02
IFH1YLR223C PEP7P32609 515 aa2.42□□□□□ -2.02
IFH1YLR223C NMD3P38861 518 aaKnown RBP2.42□□□□□ -2.02
IFH1YLR223C YAR028WP39548 234 aa2.42□□□□□ -2.02
IFH1YLR223C GTS1P40956 396 aa2.42□□□□□ -2.02
IFH1YLR223C FRT1Q99332 602 aa2.42□□□□□ -2.02
IFH1YLR223C PGM1P33401 570 aaKnown RBP2.41□□□□□ -2.02
IFH1YLR223C INP52P50942 1183 aa2.41□□□□□ -2.02
IFH1YLR223C MSH6Q03834 1242 aa2.41□□□□□ -2.02
IFH1YLR223C PTC7P38797 343 aa2.41□□□□□ -2.02
IFH1YLR223C YGR045CP53229 120 aa2.41□□□□□ -2.02
IFH1YLR223C GCD1P09032 578 aaPredicted RBP2.4□□□□□ -2.02
IFH1YLR223C PRP40P33203 583 aaKnown RBP2.4□□□□□ -2.02
IFH1YLR223C NNK1P36003 928 aa2.4□□□□□ -2.02
IFH1YLR223C MSH4P40965 878 aaPredicted RBP2.4□□□□□ -2.02
IFH1YLR223C RSB1Q08417 382 aa2.4□□□□□ -2.02
IFH1YLR223C HRK1Q08732 759 aaKnown RBP2.4□□□□□ -2.02
IFH1YLR223C YIG1Q08956 461 aa2.4□□□□□ -2.02
IFH1YLR223C MGE1P38523 228 aa2.4□□□□□ -2.03
IFH1YLR223C XKS1P42826 600 aa2.4□□□□□ -2.03
IFH1YLR223C SLS1P42900 643 aa2.4□□□□□ -2.03
IFH1YLR223C TRL1P09880 827 aaKnown RBP2.39□□□□□ -2.03
IFH1YLR223C AIM26P32858 118 aa2.39□□□□□ -2.03
IFH1YLR223C VPS35P34110 944 aa2.39□□□□□ -2.03
IFH1YLR223C CTR9P89105 1077 aa2.39□□□□□ -2.03
IFH1YLR223C YLR257WQ06146 321 aaKnown RBP2.39□□□□□ -2.03
IFH1YLR223C GAS1P22146 559 aaKnown RBP2.39□□□□□ -2.03
IFH1YLR223C SMY2P32909 740 aaKnown RBP2.39□□□□□ -2.03
IFH1YLR223C RPT1P33299 467 aaKnown RBP2.39□□□□□ -2.03
IFH1YLR223C RIM11P38615 370 aa2.39□□□□□ -2.03
IFH1YLR223C IPL1P38991 367 aa2.39□□□□□ -2.03
IFH1YLR223C SSY1Q03770 852 aa2.39□□□□□ -2.03
IFH1YLR223C MAG2Q06436 670 aaKnown RBP2.39□□□□□ -2.03
IFH1YLR223C TRE1Q08919 783 aa2.39□□□□□ -2.03
IFH1YLR223C COBP00163 385 aa2.39□□□□□ -2.03
IFH1YLR223C MSH3P25336 1018 aa2.39□□□□□ -2.03
IFH1YLR223C PEX28P38848 579 aa2.39□□□□□ -2.03
IFH1YLR223C RET1P22276 1149 aaKnown RBP2.38□□□□□ -2.03
IFH1YLR223C DUR3P33413 735 aa2.38□□□□□ -2.03
IFH1YLR223C HSP78P33416 811 aa2.38□□□□□ -2.03
IFH1YLR223C YHL012WP38709 493 aa2.38□□□□□ -2.03
IFH1YLR223C NBA1Q08229 501 aaKnown RBP2.38□□□□□ -2.03
IFH1YLR223C PRP43P53131 767 aaKnown RBP2.38□□□□□ -2.03
IFH1YLR223C DFG16Q99234 619 aa2.38□□□□□ -2.03
IFH1YLR223C COQ4O13525 335 aa2.37□□□□□ -2.03
IFH1YLR223C SCP160P06105 1222 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
IFH1YLR223C MSC6Q08818 692 aaKnown RBP2.37□□□□□ -2.03
IFH1YLR223C TY1A-LR4P0C2I8 440 aaKnown RBP2.37□□□□□ -2.03
IFH1YLR223C TY1A-DR6P0CX70 440 aa2.37□□□□□ -2.03
IFH1YLR223C TY1A-ER1P0CX71 440 aa2.37□□□□□ -2.03
IFH1YLR223C TY1A-LR2P0CX72 440 aa2.37□□□□□ -2.03
IFH1YLR223C TY1A-PLP0CX73 440 aa2.37□□□□□ -2.03
IFH1YLR223C TY1A-JR1P0CX74 440 aa2.37□□□□□ -2.03
IFH1YLR223C TY1A-LR3P0CX75 440 aa2.37□□□□□ -2.03
IFH1YLR223C TY1A-ML2P0CX76 440 aa2.37□□□□□ -2.03
IFH1YLR223C SEC23P15303 768 aaKnown RBP2.37□□□□□ -2.03
IFH1YLR223C MRPS18P42847 217 aa2.37□□□□□ -2.03
IFH1YLR223C CTH1P47976 325 aa2.37□□□□□ -2.03
IFH1YLR223C ECL1P48235 211 aa2.37□□□□□ -2.03
IFH1YLR223C ULP1Q02724 621 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 40.4 ms