RNA–Protein interactions for RNA: YLR171W

YLR171W, Transcript of Dubious open reading frame, yeast

Gene YLR171W, Length 390 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YLR171W	YLR171W	GCV1	P48015	400 aa		5.05	□□□□□ -1.6
YLR171W	YLR171W	UTP22	P53254	1237 aa	Predicted RBP	5.05	□□□□□ -1.6
YLR171W	YLR171W	YAF9	P53930	226 aa		5.05	□□□□□ -1.6
YLR171W	YLR171W	BRE4	Q07660	1125 aa		5.05	□□□□□ -1.6
YLR171W	YLR171W	RVS167	P39743	482 aa	Known RBP	5.04	□□□□□ -1.6
YLR171W	YLR171W	SAM37	P50110	327 aa		5.04	□□□□□ -1.6
YLR171W	YLR171W	MEC3	Q02574	474 aa		5.04	□□□□□ -1.6
YLR171W	YLR171W	ALG6	Q12001	544 aa	Known RBP	5.04	□□□□□ -1.6
YLR171W	YLR171W	REI1	P38344	393 aa	Predicted RBP	5.03	□□□□□ -1.6
YLR171W	YLR171W	SSF1	P38789	453 aa	Predicted RBP	5.03	□□□□□ -1.6
YLR171W	YLR171W	WHI3	P34761	661 aa	Known RBP	5.02	□□□□□ -1.61
YLR171W	YLR171W	MMM1	P41800	426 aa		5.02	□□□□□ -1.61
YLR171W	YLR171W	MAG2	Q06436	670 aa	Known RBP	5.02	□□□□□ -1.61
YLR171W	YLR171W	TY1A-LR4	P0C2I8	440 aa	Known RBP	5.01	□□□□□ -1.61
YLR171W	YLR171W	TY1A-DR6	P0CX70	440 aa		5.01	□□□□□ -1.61
YLR171W	YLR171W	TY1A-ER1	P0CX71	440 aa		5.01	□□□□□ -1.61
YLR171W	YLR171W	TY1A-LR2	P0CX72	440 aa		5.01	□□□□□ -1.61
YLR171W	YLR171W	TY1A-PL	P0CX73	440 aa		5.01	□□□□□ -1.61
YLR171W	YLR171W	TY1A-JR1	P0CX74	440 aa		5.01	□□□□□ -1.61
YLR171W	YLR171W	TY1A-LR3	P0CX75	440 aa		5.01	□□□□□ -1.61
YLR171W	YLR171W	TY1A-ML2	P0CX76	440 aa		5.01	□□□□□ -1.61
YLR171W	YLR171W	CIC1	P38779	376 aa	Known RBP	5.01	□□□□□ -1.61
YLR171W	YLR171W	SDH1	Q00711	640 aa		5.01	□□□□□ -1.61
YLR171W	YLR171W	YCS4	Q06156	1176 aa		5.01	□□□□□ -1.61
YLR171W	YLR171W	TY1A-GR1	Q12085	440 aa		5.01	□□□□□ -1.61
YLR171W	YLR171W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	5.01	□□□□□ -1.61
YLR171W	YLR171W	TY1A-OL	Q92392	440 aa	Known RBP	5.01	□□□□□ -1.61
YLR171W	YLR171W	GCD1	P09032	578 aa	Predicted RBP	5	□□□□□ -1.61
YLR171W	YLR171W	CIT3	P43635	486 aa		5	□□□□□ -1.61
YLR171W	YLR171W	RPS4A	P0CX35	261 aa	Known RBP	4.99	□□□□□ -1.61
YLR171W	YLR171W	RPS4B	P0CX36	261 aa	Known RBP	4.99	□□□□□ -1.61
YLR171W	YLR171W	YKL077W	P36081	392 aa		4.99	□□□□□ -1.61
YLR171W	YLR171W	SEA4	P38164	1038 aa		4.99	□□□□□ -1.61
YLR171W	YLR171W	MSH4	P40965	878 aa	Predicted RBP	4.99	□□□□□ -1.61
YLR171W	YLR171W	AVT1	P47082	602 aa		4.99	□□□□□ -1.61
YLR171W	YLR171W	PHO4	P07270	312 aa	Known RBP	4.98	□□□□□ -1.61
YLR171W	YLR171W	MET4	P32389	672 aa		4.98	□□□□□ -1.61
YLR171W	YLR171W	EXO5	P38289	585 aa		4.98	□□□□□ -1.61
YLR171W	YLR171W	STM1	P39015	273 aa	Known RBP	4.98	□□□□□ -1.61
YLR171W	YLR171W	YGR045C	P53229	120 aa		4.98	□□□□□ -1.61
YLR171W	YLR171W	ELA1	P53861	379 aa	Predicted RBP	4.98	□□□□□ -1.61
YLR171W	YLR171W	RCM1	P53972	490 aa		4.98	□□□□□ -1.61
YLR171W	YLR171W	MSC6	Q08818	692 aa	Known RBP	4.98	□□□□□ -1.61
YLR171W	YLR171W	GCD6	P32501	712 aa	Known RBP	4.97	□□□□□ -1.61
YLR171W	YLR171W	UGA4	P32837	571 aa		4.97	□□□□□ -1.61
YLR171W	YLR171W	VPS35	P34110	944 aa		4.97	□□□□□ -1.61
YLR171W	YLR171W	PPX1	P38698	397 aa		4.97	□□□□□ -1.61
YLR171W	YLR171W	SHU2	P38957	223 aa		4.97	□□□□□ -1.61
YLR171W	YLR171W	THI12	P42883	340 aa		4.97	□□□□□ -1.61
YLR171W	YLR171W	SLS1	P42900	643 aa		4.97	□□□□□ -1.61
YLR171W	YLR171W	THI5	P43534	340 aa		4.97	□□□□□ -1.61
YLR171W	YLR171W	THI11	P47183	340 aa		4.97	□□□□□ -1.61
YLR171W	YLR171W	EAR1	Q03212	550 aa		4.97	□□□□□ -1.61
YLR171W	YLR171W	THI13	Q07748	340 aa		4.97	□□□□□ -1.61
YLR171W	YLR171W	AVO1	Q08236	1176 aa		4.97	□□□□□ -1.61
YLR171W	YLR171W	NSI1	Q12457	570 aa		4.97	□□□□□ -1.61
YLR171W	YLR171W	NFS1	P25374	497 aa		4.96	□□□□□ -1.62
YLR171W	YLR171W	PRP40	P33203	583 aa	Known RBP	4.96	□□□□□ -1.62
YLR171W	YLR171W	ARL1	P38116	183 aa	Known RBP	4.96	□□□□□ -1.62
YLR171W	YLR171W	DAK2	P43550	591 aa		4.96	□□□□□ -1.62
YLR171W	YLR171W	ALT1	P52893	592 aa		4.96	□□□□□ -1.62
YLR171W	YLR171W	PEX13	P80667	386 aa		4.96	□□□□□ -1.62
YLR171W	YLR171W	DAL4	Q04895	635 aa		4.96	□□□□□ -1.62
YLR171W	YLR171W	TAF7	Q05021	590 aa		4.96	□□□□□ -1.62
YLR171W	YLR171W	YOR059C	Q08448	450 aa	Known RBP	4.96	□□□□□ -1.62
YLR171W	YLR171W	WHI5	Q12416	295 aa		4.96	□□□□□ -1.62
YLR171W	YLR171W	NEM1	P38757	446 aa		4.95	□□□□□ -1.62
YLR171W	YLR171W	OYE3	P41816	400 aa	Predicted RBP	4.95	□□□□□ -1.62
YLR171W	YLR171W	NOG1	Q02892	647 aa	Known RBP	4.95	□□□□□ -1.62
YLR171W	YLR171W	MSH3	P25336	1018 aa		4.94	□□□□□ -1.62
YLR171W	YLR171W	SMY2	P32909	740 aa	Known RBP	4.94	□□□□□ -1.62
YLR171W	YLR171W	IRC24	P40580	263 aa		4.94	□□□□□ -1.62
YLR171W	YLR171W	RSM26	P47141	266 aa		4.94	□□□□□ -1.62
YLR171W	YLR171W	ULP1	Q02724	621 aa		4.94	□□□□□ -1.62
YLR171W	YLR171W	TOS4	Q06266	489 aa		4.94	□□□□□ -1.62
YLR171W	YLR171W	LRG1	P35688	1017 aa		4.93	□□□□□ -1.62
YLR171W	YLR171W	NNK1	P36003	928 aa		4.93	□□□□□ -1.62
YLR171W	YLR171W	IPL1	P38991	367 aa		4.93	□□□□□ -1.62
YLR171W	YLR171W	OXR1	Q08952	273 aa		4.93	□□□□□ -1.62
YLR171W	YLR171W	YVC1	Q12324	675 aa		4.93	□□□□□ -1.62
YLR171W	YLR171W	KAR2	P16474	682 aa	Known RBP	4.92	□□□□□ -1.62
YLR171W	YLR171W	SQT1	P35184	431 aa		4.92	□□□□□ -1.62
YLR171W	YLR171W	POL12	P38121	705 aa	Predicted RBP	4.92	□□□□□ -1.62
YLR171W	YLR171W	MTR4	P47047	1073 aa	Known RBP	4.92	□□□□□ -1.62
YLR171W	YLR171W	RPT1	P33299	467 aa	Known RBP	4.91	□□□□□ -1.62
YLR171W	YLR171W	YAR028W	P39548	234 aa		4.91	□□□□□ -1.62
YLR171W	YLR171W	UTP5	Q04177	643 aa	Known RBP	4.91	□□□□□ -1.62
YLR171W	YLR171W	TRE1	Q08919	783 aa		4.91	□□□□□ -1.62
YLR171W	YLR171W	SEC20	P28791	383 aa		4.9	□□□□□ -1.63
YLR171W	YLR171W	SEG2	P34250	1132 aa		4.9	□□□□□ -1.63
YLR171W	YLR171W	PEX28	P38848	579 aa		4.9	□□□□□ -1.63
YLR171W	YLR171W	NMD3	P38861	518 aa	Known RBP	4.9	□□□□□ -1.63
YLR171W	YLR171W	XKS1	P42826	600 aa		4.9	□□□□□ -1.63
YLR171W	YLR171W	YNR063W	P53749	607 aa		4.9	□□□□□ -1.63
YLR171W	YLR171W	SSY1	Q03770	852 aa		4.9	□□□□□ -1.63
YLR171W	YLR171W	TPP1	Q03796	238 aa		4.9	□□□□□ -1.63
YLR171W	YLR171W	PUS7	Q08647	676 aa	Known RBP	4.9	□□□□□ -1.63
YLR171W	YLR171W	RET1	P22276	1149 aa	Known RBP	4.89	□□□□□ -1.63
YLR171W	YLR171W	ADP1	P25371	1049 aa		4.89	□□□□□ -1.63
YLR171W	YLR171W	PRO1	P32264	428 aa		4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 88.6 ms