RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeastyeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC4YLR086W PRK1P40494 810 aa1.95□□□□□ -2.1
SMC4YLR086W MAD1P40957 749 aa1.95□□□□□ -2.1
SMC4YLR086W BRE2P43132 505 aa1.95□□□□□ -2.1
SMC4YLR086W TY1A-DR2Q03964 440 aaKnown RBP1.95□□□□□ -2.1
SMC4YLR086W MRPL16P38064 232 aa1.94□□□□□ -2.1
SMC4YLR086W FAR11P53917 953 aa1.94□□□□□ -2.1
SMC4YLR086W MEC3Q02574 474 aa1.94□□□□□ -2.1
SMC4YLR086W OPI10Q08202 246 aa1.94□□□□□ -2.1
SMC4YLR086W GCR1P07261 785 aa1.94□□□□□ -2.1
SMC4YLR086W MRP8P35719 219 aa1.94□□□□□ -2.1
SMC4YLR086W TFA2P36145 328 aa1.94□□□□□ -2.1
SMC4YLR086W GGA2P38817 585 aaKnown RBP1.94□□□□□ -2.1
SMC4YLR086W PEX28P38848 579 aa1.94□□□□□ -2.1
SMC4YLR086W SCW11P53189 542 aa1.94□□□□□ -2.1
SMC4YLR086W SPC42P36094 363 aa1.94□□□□□ -2.1
SMC4YLR086W YHR020WP38708 688 aaKnown RBP1.94□□□□□ -2.1
SMC4YLR086W YNR065CP53751 1116 aa1.94□□□□□ -2.1
SMC4YLR086W NAN1Q02931 896 aaKnown RBP1.94□□□□□ -2.1
SMC4YLR086W YLL054CQ12244 843 aa1.94□□□□□ -2.1
SMC4YLR086W RKM4Q12504 494 aa1.94□□□□□ -2.1
SMC4YLR086W LYP1P32487 611 aa1.94□□□□□ -2.1
SMC4YLR086W RPN3P40016 523 aaKnown RBP1.94□□□□□ -2.1
SMC4YLR086W ROG3P43602 733 aa1.94□□□□□ -2.1
SMC4YLR086W YJR124CP47159 448 aa1.94□□□□□ -2.1
SMC4YLR086W UTP8P53276 713 aaKnown RBP1.94□□□□□ -2.1
SMC4YLR086W ALD6P54115 500 aaKnown RBP1.94□□□□□ -2.1
SMC4YLR086W HDA2Q06629 674 aa1.94□□□□□ -2.1
SMC4YLR086W DPH6Q12429 685 aa1.94□□□□□ -2.1
SMC4YLR086W INO80P53115 1489 aa1.93□□□□□ -2.1
SMC4YLR086W SCP160P06105 1222 aaKnown RBP RIP-Chip data1.93□□□□□ -2.1not detected
SMC4YLR086W RAD27P26793 382 aa1.93□□□□□ -2.1
SMC4YLR086W DLD1P32891 587 aa1.93□□□□□ -2.1
SMC4YLR086W PIN4P34217 668 aaKnown RBP RIP-Chip data1.93□□□□□ -2.1not detected
SMC4YLR086W IRR1P40541 1150 aa1.93□□□□□ -2.1
SMC4YLR086W PPT1P53043 513 aa1.93□□□□□ -2.1
SMC4YLR086W CUZ1P53899 274 aa1.93□□□□□ -2.1
SMC4YLR086W JIP5Q06214 492 aaPredicted RBP1.93□□□□□ -2.1
SMC4YLR086W CIT2P08679 460 aa1.93□□□□□ -2.1
SMC4YLR086W DBP5P20449 482 aaKnown RBP1.93□□□□□ -2.1
SMC4YLR086W PBY1P38254 753 aa1.93□□□□□ -2.1
SMC4YLR086W RGD1P38339 666 aa1.93□□□□□ -2.1
SMC4YLR086W POL5P39985 1022 aaKnown RBP1.93□□□□□ -2.1
SMC4YLR086W JJJ3P47138 172 aa1.93□□□□□ -2.1
SMC4YLR086W UTP22P53254 1237 aaPredicted RBP1.93□□□□□ -2.1
SMC4YLR086W SPO71Q03868 1245 aa1.93□□□□□ -2.1
SMC4YLR086W WRS1Q12109 432 aaKnown RBP1.93□□□□□ -2.1
SMC4YLR086W MSH3P25336 1018 aa1.93□□□□□ -2.1
SMC4YLR086W RER2P35196 286 aa1.93□□□□□ -2.1
SMC4YLR086W ADD66P36040 267 aa1.93□□□□□ -2.1
SMC4YLR086W BRN1P38170 754 aa1.93□□□□□ -2.1
SMC4YLR086W ECM2P38241 364 aaKnown RBP1.93□□□□□ -2.1
SMC4YLR086W VAC8P39968 578 aa1.93□□□□□ -2.1
SMC4YLR086W SIT1P39980 628 aa1.93□□□□□ -2.1
SMC4YLR086W MPH1P40562 993 aa1.93□□□□□ -2.1
SMC4YLR086W FET4P40988 552 aa1.93□□□□□ -2.1
SMC4YLR086W HAS1Q03532 505 aaKnown RBP1.93□□□□□ -2.1
SMC4YLR086W YLL058WQ12198 575 aa1.93□□□□□ -2.1
SMC4YLR086W FPS1P23900 669 aa1.92□□□□□ -2.1
SMC4YLR086W GRX1P25373 110 aaKnown RBP1.92□□□□□ -2.1
SMC4YLR086W YKL077WP36081 392 aa1.92□□□□□ -2.1
SMC4YLR086W YBR238CP38330 731 aaKnown RBP1.92□□□□□ -2.1
SMC4YLR086W UTP5Q04177 643 aaKnown RBP1.92□□□□□ -2.1
SMC4YLR086W GIS4Q04233 774 aa1.92□□□□□ -2.1
SMC4YLR086W TY4B-PA0A0B7P3V8 1104 aa1.92□□□□□ -2.1
SMC4YLR086W MET22P32179 357 aa1.92□□□□□ -2.1
SMC4YLR086W MTR4P47047 1073 aaKnown RBP1.92□□□□□ -2.1
SMC4YLR086W VPS53P47061 822 aa1.92□□□□□ -2.1
SMC4YLR086W FAA4P47912 694 aaKnown RBP1.92□□□□□ -2.1
SMC4YLR086W TY4A-HQ6Q5P6 413 aa1.92□□□□□ -2.1
SMC4YLR086W PDC5P16467 563 aaKnown RBP1.92□□□□□ -2.1
SMC4YLR086W MKK2P32491 506 aa1.92□□□□□ -2.1
SMC4YLR086W SFA1P32771 386 aa1.92□□□□□ -2.1
SMC4YLR086W UGA4P32837 571 aa1.92□□□□□ -2.1
SMC4YLR086W SQT1P35184 431 aa1.92□□□□□ -2.1
SMC4YLR086W BAP2P38084 609 aa1.92□□□□□ -2.1
SMC4YLR086W NEM1P38757 446 aa1.92□□□□□ -2.1
SMC4YLR086W CNN1P43618 361 aa1.92□□□□□ -2.1
SMC4YLR086W HNT2P49775 206 aa1.92□□□□□ -2.1
SMC4YLR086W TYW3P53177 273 aa1.92□□□□□ -2.1
SMC4YLR086W ALG12P53730 551 aa1.92□□□□□ -2.1
SMC4YLR086W GDE1Q02979 1223 aa1.92□□□□□ -2.1
SMC4YLR086W YPL260WQ08977 551 aa1.92□□□□□ -2.1
SMC4YLR086W TRP2P00899 507 aaKnown RBP1.91□□□□□ -2.1
SMC4YLR086W GPM1P00950 247 aaKnown RBP1.91□□□□□ -2.1
SMC4YLR086W AFG2P32794 780 aa1.91□□□□□ -2.1
SMC4YLR086W PFD1P46988 109 aa1.91□□□□□ -2.1
SMC4YLR086W YMR265CQ03508 461 aaKnown RBP1.91□□□□□ -2.1
SMC4YLR086W ATG13Q06628 738 aa1.91□□□□□ -2.1
SMC4YLR086W FMP25Q08023 583 aa1.91□□□□□ -2.1
SMC4YLR086W GNT1Q12096 491 aa1.91□□□□□ -2.1
SMC4YLR086W PAF1P38351 445 aa1.91□□□□□ -2.1
SMC4YLR086W DSE4P53753 1117 aa1.91□□□□□ -2.1
SMC4YLR086W NAB6Q03735 1134 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
SMC4YLR086W SPO75Q07798 868 aa1.91□□□□□ -2.1
SMC4YLR086W TY1A-LR4P0C2I8 440 aaKnown RBP1.91□□□□□ -2.1
SMC4YLR086W TY1A-DR6P0CX70 440 aa1.91□□□□□ -2.1
SMC4YLR086W TY1A-ER1P0CX71 440 aa1.91□□□□□ -2.1
SMC4YLR086W TY1A-LR2P0CX72 440 aa1.91□□□□□ -2.1
SMC4YLR086W TY1A-PLP0CX73 440 aa1.91□□□□□ -2.1
SMC4YLR086W TY1A-JR1P0CX74 440 aa1.91□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms