RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C ECM2P38241 364 aaKnown RBP4.9□□□□□ -1.63
RPL40BYKR094C GLO3P38682 493 aaKnown RBP4.9□□□□□ -1.63
RPL40BYKR094C ALT1P52893 592 aa4.9□□□□□ -1.63
RPL40BYKR094C MEC3Q02574 474 aa4.9□□□□□ -1.63
RPL40BYKR094C SSY1Q03770 852 aa4.9□□□□□ -1.63
RPL40BYKR094C PRP5P21372 849 aaPredicted RBP4.89□□□□□ -1.63
RPL40BYKR094C REI1P38344 393 aaPredicted RBP4.89□□□□□ -1.63
RPL40BYKR094C RSC4Q02206 625 aa4.89□□□□□ -1.63
RPL40BYKR094C TRE1Q08919 783 aa4.89□□□□□ -1.63
RPL40BYKR094C THI80P35202 319 aa4.88□□□□□ -1.63
RPL40BYKR094C PEX7P39108 375 aa4.88□□□□□ -1.63
RPL40BYKR094C GIP4P39732 760 aa4.88□□□□□ -1.63
RPL40BYKR094C UTP22P53254 1237 aaPredicted RBP4.88□□□□□ -1.63
RPL40BYKR094C UFD2P54860 961 aa4.88□□□□□ -1.63
RPL40BYKR094C YVC1Q12324 675 aa4.88□□□□□ -1.63
RPL40BYKR094C PRO1P32264 428 aa4.87□□□□□ -1.63
RPL40BYKR094C QDR1P40475 563 aa4.87□□□□□ -1.63
RPL40BYKR094C LPX1Q12405 387 aaKnown RBP4.87□□□□□ -1.63
RPL40BYKR094C NFS1P25374 497 aa4.86□□□□□ -1.63
RPL40BYKR094C ELA1P53861 379 aaPredicted RBP4.86□□□□□ -1.63
RPL40BYKR094C ORC3P54790 616 aa4.86□□□□□ -1.63
RPL40BYKR094C MSH6Q03834 1242 aa4.86□□□□□ -1.63
RPL40BYKR094C KAR5Q04746 504 aa4.86□□□□□ -1.63
RPL40BYKR094C TY1A-LR4P0C2I8 440 aaKnown RBP4.85□□□□□ -1.63
RPL40BYKR094C TY1A-DR6P0CX70 440 aa4.85□□□□□ -1.63
RPL40BYKR094C TY1A-ER1P0CX71 440 aa4.85□□□□□ -1.63
RPL40BYKR094C TY1A-LR2P0CX72 440 aa4.85□□□□□ -1.63
RPL40BYKR094C TY1A-PLP0CX73 440 aa4.85□□□□□ -1.63
RPL40BYKR094C TY1A-JR1P0CX74 440 aa4.85□□□□□ -1.63
RPL40BYKR094C TY1A-LR3P0CX75 440 aa4.85□□□□□ -1.63
RPL40BYKR094C TY1A-ML2P0CX76 440 aa4.85□□□□□ -1.63
RPL40BYKR094C YGR045CP53229 120 aa4.85□□□□□ -1.63
RPL40BYKR094C SUB2Q07478 446 aaKnown RBP4.85□□□□□ -1.63
RPL40BYKR094C TY1A-GR1Q12085 440 aa4.85□□□□□ -1.63
RPL40BYKR094C TY1A-PR3Q6Q5H1 440 aaKnown RBP4.85□□□□□ -1.63
RPL40BYKR094C TY1A-OLQ92392 440 aaKnown RBP4.85□□□□□ -1.63
RPL40BYKR094C SMY2P32909 740 aaKnown RBP4.84□□□□□ -1.63
RPL40BYKR094C PTC7P38797 343 aa4.84□□□□□ -1.63
RPL40BYKR094C PRP6P19735 899 aaPredicted RBP4.83□□□□□ -1.64
RPL40BYKR094C FLR1P38124 548 aa4.83□□□□□ -1.64
RPL40BYKR094C SAP155P43612 1002 aa4.83□□□□□ -1.64
RPL40BYKR094C FLP1P03870 423 aa4.82□□□□□ -1.64
RPL40BYKR094C AIM3P38266 947 aaKnown RBP4.82□□□□□ -1.64
RPL40BYKR094C GTS1P40956 396 aa4.82□□□□□ -1.64
RPL40BYKR094C YNL011CP53980 444 aa4.82□□□□□ -1.64
RPL40BYKR094C BSC2Q05611 235 aa4.82□□□□□ -1.64
RPL40BYKR094C YDL177CQ12257 170 aa4.82□□□□□ -1.64
RPL40BYKR094C ATG1P53104 897 aa4.81□□□□□ -1.64
RPL40BYKR094C YAF9P53930 226 aa4.81□□□□□ -1.64
RPL40BYKR094C TRS120Q04183 1289 aa4.81□□□□□ -1.64
RPL40BYKR094C AVO1Q08236 1176 aa4.81□□□□□ -1.64
RPL40BYKR094C MNL2Q12205 849 aa4.81□□□□□ -1.64
RPL40BYKR094C NNK1P36003 928 aa4.8□□□□□ -1.64
RPL40BYKR094C NUT1P53114 1132 aa4.8□□□□□ -1.64
RPL40BYKR094C MRPL22P53881 309 aa4.8□□□□□ -1.64
RPL40BYKR094C PMT7Q06644 662 aa4.8□□□□□ -1.64
RPL40BYKR094C MCM5P29496 775 aaKnown RBP4.79□□□□□ -1.64
RPL40BYKR094C ETP1P38748 585 aaKnown RBP4.79□□□□□ -1.64
RPL40BYKR094C PUS7Q08647 676 aaKnown RBP4.79□□□□□ -1.64
RPL40BYKR094C SLS1P42900 643 aa4.78□□□□□ -1.64
RPL40BYKR094C MON1P53129 644 aa4.78□□□□□ -1.64
RPL40BYKR094C CDC55Q00362 526 aa4.78□□□□□ -1.64
RPL40BYKR094C TPP1Q03796 238 aa4.78□□□□□ -1.64
RPL40BYKR094C INP54Q08227 384 aaKnown RBP4.78□□□□□ -1.64
RPL40BYKR094C ARL1P38116 183 aaKnown RBP4.77□□□□□ -1.65
RPL40BYKR094C NMD3P38861 518 aaKnown RBP4.77□□□□□ -1.65
RPL40BYKR094C ACF4P47129 309 aa4.77□□□□□ -1.65
RPL40BYKR094C HDA2Q06629 674 aa4.77□□□□□ -1.65
RPL40BYKR094C EXO5P38289 585 aa4.76□□□□□ -1.65
RPL40BYKR094C RIM8P53179 542 aa4.76□□□□□ -1.65
RPL40BYKR094C RPL34AP87262 121 aaPredicted RBP4.76□□□□□ -1.65
RPL40BYKR094C NEM1P38757 446 aa4.75□□□□□ -1.65
RPL40BYKR094C TOD6P34219 525 aa4.74□□□□□ -1.65
RPL40BYKR094C YKL077WP36081 392 aa4.74□□□□□ -1.65
RPL40BYKR094C SAM35P14693 329 aa4.73□□□□□ -1.65
RPL40BYKR094C YAR028WP39548 234 aa4.73□□□□□ -1.65
RPL40BYKR094C RVS167P39743 482 aaKnown RBP4.73□□□□□ -1.65
RPL40BYKR094C YLR257WQ06146 321 aaKnown RBP4.73□□□□□ -1.65
RPL40BYKR094C YPL277CQ08989 487 aa4.73□□□□□ -1.65
RPL40BYKR094C SOD2P00447 233 aa4.72□□□□□ -1.65
RPL40BYKR094C TRL1P09880 827 aaKnown RBP4.72□□□□□ -1.65
RPL40BYKR094C YHL012WP38709 493 aa4.72□□□□□ -1.65
RPL40BYKR094C GPI13Q07830 1017 aa4.72□□□□□ -1.65
RPL40BYKR094C RPS13P05756 151 aaKnown RBP4.71□□□□□ -1.66
RPL40BYKR094C RET1P22276 1149 aaKnown RBP4.71□□□□□ -1.66
RPL40BYKR094C GRS1P38088 690 aaKnown RBP4.71□□□□□ -1.66
RPL40BYKR094C FRT1Q99332 602 aa4.71□□□□□ -1.66
RPL40BYKR094C NOC3Q07896 663 aaPredicted RBP4.7□□□□□ -1.66
RPL40BYKR094C SHU2P38957 223 aa4.69□□□□□ -1.66
RPL40BYKR094C MTR4P47047 1073 aaKnown RBP4.69□□□□□ -1.66
RPL40BYKR094C FOL2P51601 243 aaKnown RBP4.69□□□□□ -1.66
RPL40BYKR094C SNO2P53823 222 aa4.69□□□□□ -1.66
RPL40BYKR094C UTP5Q04177 643 aaKnown RBP4.69□□□□□ -1.66
RPL40BYKR094C RSA3Q05942 220 aaKnown RBP4.69□□□□□ -1.66
RPL40BYKR094C AIM26P32858 118 aa4.68□□□□□ -1.66
RPL40BYKR094C MDL2P33311 773 aa4.68□□□□□ -1.66
RPL40BYKR094C ERP5P38819 212 aa4.67□□□□□ -1.66
RPL40BYKR094C XKS1P42826 600 aa4.67□□□□□ -1.66
RPL40BYKR094C MDJ2P42834 146 aa4.67□□□□□ -1.66
RPL40BYKR094C YJL045WP47052 634 aa4.67□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms