RNA–Protein interactions for RNA: YKR036C

CAF4, Transcript of WD40 repeat-containing protein associated with the CCR4-NOT complex, yeastyeast

Gene CAF4, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF4YKR036C CCT4P39078 528 aaKnown RBP5.41□□□□□ -1.54
CAF4YKR036C AIM9P40053 627 aaKnown RBP5.41□□□□□ -1.54
CAF4YKR036C HOS4P40480 1083 aa5.41□□□□□ -1.54
CAF4YKR036C YIL089WP40500 205 aa5.41□□□□□ -1.54
CAF4YKR036C ZDS2P54786 942 aa5.41□□□□□ -1.54
CAF4YKR036C ARO80Q04052 950 aa5.41□□□□□ -1.54
CAF4YKR036C UBX2Q04228 584 aa5.41□□□□□ -1.54
CAF4YKR036C POM152P39685 1337 aa5.41□□□□□ -1.54
CAF4YKR036C COQ4O13525 335 aa5.4□□□□□ -1.54
CAF4YKR036C SUP35P05453 685 aaKnown RBP5.4□□□□□ -1.54
CAF4YKR036C KRS1P15180 591 aaKnown RBP5.4□□□□□ -1.54
CAF4YKR036C GAP1P19145 602 aaPredicted RBP5.4□□□□□ -1.54
CAF4YKR036C SPT8P38915 602 aa5.4□□□□□ -1.54
CAF4YKR036C SIT1P39980 628 aa5.4□□□□□ -1.54
CAF4YKR036C CUS1Q02554 436 aaPredicted RBP5.4□□□□□ -1.54
CAF4YKR036C WAR1Q03631 944 aa5.4□□□□□ -1.54
CAF4YKR036C STE23Q06010 1027 aa5.4□□□□□ -1.54
CAF4YKR036C CMS1Q07897 291 aaKnown RBP5.4□□□□□ -1.54
CAF4YKR036C YOR223WQ12015 292 aa5.4□□□□□ -1.54
CAF4YKR036C NFI1Q12216 726 aa5.4□□□□□ -1.54
CAF4YKR036C TFC8Q12308 588 aa5.4□□□□□ -1.54
CAF4YKR036C SRP40P32583 406 aaPredicted RBP5.4□□□□□ -1.55
CAF4YKR036C VPS8P39702 1274 aa5.4□□□□□ -1.55
CAF4YKR036C PEA2P40091 420 aa5.4□□□□□ -1.55
CAF4YKR036C MPH1P40562 993 aa5.4□□□□□ -1.55
CAF4YKR036C YGR117CP53270 476 aa5.4□□□□□ -1.55
CAF4YKR036C MAL13P53338 473 aa5.4□□□□□ -1.55
CAF4YKR036C LCB5Q06147 687 aaKnown RBP5.4□□□□□ -1.55
CAF4YKR036C YLR271WQ06152 274 aa5.4□□□□□ -1.55
CAF4YKR036C SDH5Q08230 162 aa5.4□□□□□ -1.55
CAF4YKR036C YLL054CQ12244 843 aa5.4□□□□□ -1.55
CAF4YKR036C FAS2P19097 1887 aaKnown RBP5.4□□□□□ -1.55
CAF4YKR036C RPS19AP07280 144 aaKnown RBP5.39□□□□□ -1.55
CAF4YKR036C RPS19BP07281 144 aaPredicted RBP5.39□□□□□ -1.55
CAF4YKR036C PMR1P13586 950 aa5.39□□□□□ -1.55
CAF4YKR036C RDS1P25611 832 aa5.39□□□□□ -1.55
CAF4YKR036C PDB1P32473 366 aaKnown RBP5.39□□□□□ -1.55
CAF4YKR036C ECM32P32644 1121 aaKnown RBP5.39□□□□□ -1.55
CAF4YKR036C DSF2P38213 736 aa5.39□□□□□ -1.55
CAF4YKR036C YSW1P38280 609 aa5.39□□□□□ -1.55
CAF4YKR036C REI1P38344 393 aaPredicted RBP5.39□□□□□ -1.55
CAF4YKR036C EMP47P43555 445 aa5.39□□□□□ -1.55
CAF4YKR036C GYP7P48365 746 aa5.39□□□□□ -1.55
CAF4YKR036C APT1P49435 187 aaKnown RBP5.39□□□□□ -1.55
CAF4YKR036C PEX14P53112 341 aa5.39□□□□□ -1.55
CAF4YKR036C TRM44Q02648 567 aaKnown RBP5.39□□□□□ -1.55
CAF4YKR036C PKH1Q03407 766 aa5.39□□□□□ -1.55
CAF4YKR036C STE20Q03497 939 aaKnown RBP5.39□□□□□ -1.55
CAF4YKR036C YCG1Q06680 1035 aa5.39□□□□□ -1.55
CAF4YKR036C YOL057WQ08225 711 aa5.39□□□□□ -1.55
CAF4YKR036C SMC6Q12749 1114 aa5.39□□□□□ -1.55
CAF4YKR036C SWI1P09547 1314 aa5.39□□□□□ -1.55
CAF4YKR036C GSY2P27472 705 aa5.38□□□□□ -1.55
CAF4YKR036C SKI2P35207 1287 aaKnown RBP RIP-Chip data5.38□□□□□ -1.55not detected
CAF4YKR036C YBR287WP38355 427 aa5.38□□□□□ -1.55
CAF4YKR036C HUL4P40985 892 aa5.38□□□□□ -1.55
CAF4YKR036C TFG2P41896 400 aaPredicted RBP5.38□□□□□ -1.55
CAF4YKR036C YJR079WP47126 109 aa5.38□□□□□ -1.55
CAF4YKR036C YPT11P48559 417 aa5.38□□□□□ -1.55
CAF4YKR036C CAF130P53280 1122 aaPredicted RBP5.38□□□□□ -1.55
CAF4YKR036C NCS2P53923 493 aaPredicted RBP5.38□□□□□ -1.55
CAF4YKR036C VTC3Q02725 835 aa5.38□□□□□ -1.55
CAF4YKR036C SRT1Q03175 343 aa5.38□□□□□ -1.55
CAF4YKR036C CWC15Q03772 175 aaKnown RBP5.38□□□□□ -1.55
CAF4YKR036C CRF1Q04930 467 aa5.38□□□□□ -1.55
CAF4YKR036C ABP140Q08641 628 aaKnown RBP5.38□□□□□ -1.55
CAF4YKR036C TYW1Q08960 810 aaKnown RBP5.38□□□□□ -1.55
CAF4YKR036C CDC60P26637 1090 aaKnown RBP5.38□□□□□ -1.55
CAF4YKR036C NUF2P33895 451 aa5.38□□□□□ -1.55
CAF4YKR036C PXL1P36166 706 aa5.38□□□□□ -1.55
CAF4YKR036C RRM3P38766 723 aa5.38□□□□□ -1.55
CAF4YKR036C CCC2P38995 1004 aa5.38□□□□□ -1.55
CAF4YKR036C CTF18P49956 741 aa5.38□□□□□ -1.55
CAF4YKR036C VID30P53076 958 aa5.38□□□□□ -1.55
CAF4YKR036C INP2Q03824 705 aa5.38□□□□□ -1.55
CAF4YKR036C YOR389WQ08912 624 aa5.38□□□□□ -1.55
CAF4YKR036C TY1B-AO13527 1196 aaKnown RBP5.37□□□□□ -1.55
CAF4YKR036C CPA2P03965 1118 aaKnown RBP5.37□□□□□ -1.55
CAF4YKR036C GAL11P19659 1081 aa5.37□□□□□ -1.55
CAF4YKR036C PHO87P25360 923 aa5.37□□□□□ -1.55
CAF4YKR036C KRE2P27809 442 aa5.37□□□□□ -1.55
CAF4YKR036C ISW1P38144 1129 aa5.37□□□□□ -1.55
CAF4YKR036C PSY4P38193 441 aa5.37□□□□□ -1.55
CAF4YKR036C UBP14P38237 781 aaKnown RBP5.37□□□□□ -1.55
CAF4YKR036C YER130CP39959 443 aa5.37□□□□□ -1.55
CAF4YKR036C APL6P46682 809 aa5.37□□□□□ -1.55
CAF4YKR036C BBC1P47068 1157 aa5.37□□□□□ -1.55
CAF4YKR036C INP52P50942 1183 aa5.37□□□□□ -1.55
CAF4YKR036C YPL150WQ12152 901 aa5.37□□□□□ -1.55
CAF4YKR036C RRG1Q12167 365 aaPredicted RBP5.37□□□□□ -1.55
CAF4YKR036C DPH6Q12429 685 aa5.37□□□□□ -1.55
CAF4YKR036C PRE10P21242 288 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
CAF4YKR036C CDC15P27636 974 aa5.36□□□□□ -1.55
CAF4YKR036C GCD7P32502 381 aaPredicted RBP5.36□□□□□ -1.55
CAF4YKR036C AFG2P32794 780 aa5.36□□□□□ -1.55
CAF4YKR036C YMR124WP39523 943 aaKnown RBP5.36□□□□□ -1.55
CAF4YKR036C ICP55P40051 511 aa5.36□□□□□ -1.55
CAF4YKR036C SET4P42948 560 aa5.36□□□□□ -1.55
CAF4YKR036C TLG1Q03322 224 aa5.36□□□□□ -1.55
CAF4YKR036C RUD3Q12234 484 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms