RNA–Protein interactions for RNA: YKL195W

MIA40, Transcript of Mitochondrial oxidoreductase, yeast

Gene MIA40, Length 1,212 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MIA40	YKL195W	PKC1	P24583	1151 aa		7.62	□□□□□ -1.19
MIA40	YKL195W	NPA3	P47122	385 aa		7.62	□□□□□ -1.19
MIA40	YKL195W	YDR444W	Q04093	687 aa		7.62	□□□□□ -1.19
MIA40	YKL195W	BUG1	Q12191	341 aa		7.62	□□□□□ -1.19
MIA40	YKL195W	RRI2	Q12348	645 aa		7.62	□□□□□ -1.19
MIA40	YKL195W	KIP2	P28743	706 aa		7.61	□□□□□ -1.19
MIA40	YKL195W	OSH3	P38713	996 aa	Known RBP	7.61	□□□□□ -1.19
MIA40	YKL195W	BDH2	P39713	417 aa		7.61	□□□□□ -1.19
MIA40	YKL195W	SLN1	P39928	1220 aa	Predicted RBP	7.61	□□□□□ -1.19
MIA40	YKL195W	PIB2	P53191	635 aa		7.61	□□□□□ -1.19
MIA40	YKL195W	YNL193W	P53870	558 aa		7.61	□□□□□ -1.19
MIA40	YKL195W	UBP16	Q02863	499 aa		7.61	□□□□□ -1.19
MIA40	YKL195W	RPN7	Q06103	429 aa	Known RBP	7.61	□□□□□ -1.19
MIA40	YKL195W	LCB5	Q06147	687 aa	Known RBP	7.61	□□□□□ -1.19
MIA40	YKL195W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	7.6	□□□□□ -1.19	RIP-Chip
MIA40	YKL195W	MRT4	P33201	236 aa	Known RBP	7.6	□□□□□ -1.19
MIA40	YKL195W	IXR1	P33417	597 aa		7.6	□□□□□ -1.19
MIA40	YKL195W	NPR2	P39923	615 aa		7.6	□□□□□ -1.19
MIA40	YKL195W	DMA2	P53924	522 aa		7.6	□□□□□ -1.19
MIA40	YKL195W	ARP5	P53946	755 aa		7.6	□□□□□ -1.19
MIA40	YKL195W	YMR074C	Q04773	145 aa		7.6	□□□□□ -1.19
MIA40	YKL195W	CTI6	Q08923	506 aa		7.6	□□□□□ -1.19
MIA40	YKL195W	SAC3	P46674	1301 aa		7.59	□□□□□ -1.19
MIA40	YKL195W	RPL19A	P0CX82	189 aa	Known RBP	7.59	□□□□□ -1.19
MIA40	YKL195W	RPL19B	P0CX83	189 aa	Predicted RBP	7.59	□□□□□ -1.19
MIA40	YKL195W	BRL1	P38770	471 aa		7.59	□□□□□ -1.19
MIA40	YKL195W	SPO22	P40511	975 aa		7.59	□□□□□ -1.19
MIA40	YKL195W	CWH41	P53008	833 aa		7.59	□□□□□ -1.19
MIA40	YKL195W	HST1	P53685	503 aa		7.59	□□□□□ -1.19
MIA40	YKL195W	RAT1	Q02792	1006 aa	Known RBP	7.59	□□□□□ -1.19
MIA40	YKL195W	OPI1	P21957	404 aa		7.58	□□□□□ -1.2
MIA40	YKL195W	NGR1	P32831	672 aa	Known RBP	7.58	□□□□□ -1.2
MIA40	YKL195W	AIM9	P40053	627 aa	Known RBP	7.58	□□□□□ -1.2
MIA40	YKL195W	ENP2	P48234	707 aa	Known RBP	7.58	□□□□□ -1.2
MIA40	YKL195W	PEX14	P53112	341 aa		7.58	□□□□□ -1.2
MIA40	YKL195W	HRQ1	Q05549	1077 aa		7.58	□□□□□ -1.2
MIA40	YKL195W	RIM15	P43565	1770 aa		7.58	□□□□□ -1.2
MIA40	YKL195W	PIF1	P07271	859 aa		7.57	□□□□□ -1.2
MIA40	YKL195W	VAC17	P25591	423 aa		7.57	□□□□□ -1.2
MIA40	YKL195W	RSM25	P40496	264 aa		7.57	□□□□□ -1.2
MIA40	YKL195W	DIB1	Q06819	143 aa	Predicted RBP	7.57	□□□□□ -1.2
MIA40	YKL195W	ADR1	P07248	1323 aa		7.56	□□□□□ -1.2
MIA40	YKL195W	SIS2	P36024	562 aa		7.56	□□□□□ -1.2
MIA40	YKL195W	TTI1	P36097	1038 aa		7.56	□□□□□ -1.2
MIA40	YKL195W	CIC1	P38779	376 aa	Known RBP	7.56	□□□□□ -1.2
MIA40	YKL195W	UTP22	P53254	1237 aa	Predicted RBP	7.56	□□□□□ -1.2
MIA40	YKL195W	ESF1	Q06344	628 aa	Known RBP	7.56	□□□□□ -1.2
MIA40	YKL195W	PGA3	Q12746	312 aa	Known RBP	7.56	□□□□□ -1.2
MIA40	YKL195W	YMR147W	P40218	223 aa	Known RBP	7.55	□□□□□ -1.2
MIA40	YKL195W	VID28	P40547	921 aa		7.55	□□□□□ -1.2
MIA40	YKL195W	ENT3	P47160	408 aa		7.55	□□□□□ -1.2
MIA40	YKL195W	LYS4	P49367	693 aa	Predicted RBP	7.55	□□□□□ -1.2
MIA40	YKL195W	CTF18	P49956	741 aa		7.55	□□□□□ -1.2
MIA40	YKL195W	THI3	Q07471	609 aa		7.55	□□□□□ -1.2
MIA40	YKL195W	PSK2	Q08217	1101 aa		7.55	□□□□□ -1.2
MIA40	YKL195W	POM152	P39685	1337 aa		7.54	□□□□□ -1.2
MIA40	YKL195W	MGM1	P32266	881 aa		7.54	□□□□□ -1.2
MIA40	YKL195W	KNS1	P32350	737 aa	Predicted RBP	7.54	□□□□□ -1.2
MIA40	YKL195W	IMP2'	P32351	346 aa		7.54	□□□□□ -1.2
MIA40	YKL195W	PRX1	P34227	261 aa	Known RBP	7.54	□□□□□ -1.2
MIA40	YKL195W	NUG1	P40010	520 aa	Known RBP	7.54	□□□□□ -1.2
MIA40	YKL195W	HYR1	P40581	163 aa	Known RBP	7.54	□□□□□ -1.2
MIA40	YKL195W	CIR1	P42940	261 aa		7.54	□□□□□ -1.2
MIA40	YKL195W	ALD3	P54114	506 aa		7.54	□□□□□ -1.2
MIA40	YKL195W	YDL176W	Q12027	708 aa		7.54	□□□□□ -1.2
MIA40	YKL195W	DPH6	Q12429	685 aa		7.54	□□□□□ -1.2
MIA40	YKL195W	MET1	P36150	593 aa		7.53	□□□□□ -1.2
MIA40	YKL195W	YBL036C	P38197	257 aa		7.53	□□□□□ -1.2
MIA40	YKL195W	HAL5	P38970	855 aa	Known RBP	7.53	□□□□□ -1.2
MIA40	YKL195W	RVS167	P39743	482 aa	Known RBP	7.53	□□□□□ -1.2
MIA40	YKL195W	PTK2	P47116	818 aa	Known RBP	7.53	□□□□□ -1.2
MIA40	YKL195W	YKE2	P52553	114 aa		7.53	□□□□□ -1.2
MIA40	YKL195W	RSC1	P53236	928 aa		7.53	□□□□□ -1.2
MIA40	YKL195W	SYF1	Q04048	859 aa	Predicted RBP	7.53	□□□□□ -1.2
MIA40	YKL195W	LCD1	Q04377	747 aa		7.53	□□□□□ -1.2
MIA40	YKL195W	PEX19	Q07418	342 aa		7.53	□□□□□ -1.2
MIA40	YKL195W	BDF2	Q07442	638 aa		7.53	□□□□□ -1.2
MIA40	YKL195W	SSF2	Q12153	453 aa	Predicted RBP	7.53	□□□□□ -1.2
MIA40	YKL195W	APC11	Q12157	165 aa		7.53	□□□□□ -1.2
MIA40	YKL195W	TAH18	Q12181	623 aa		7.53	□□□□□ -1.2
MIA40	YKL195W	PEP3	P27801	918 aa		7.52	□□□□□ -1.21
MIA40	YKL195W	RPN12	P32496	274 aa		7.52	□□□□□ -1.21
MIA40	YKL195W	RRP8	P38961	392 aa	Known RBP	7.52	□□□□□ -1.21
MIA40	YKL195W	IRC3	Q06683	689 aa		7.52	□□□□□ -1.21
MIA40	YKL195W	ETT1	Q08421	412 aa	Known RBP	7.52	□□□□□ -1.21
MIA40	YKL195W	AIM44	Q99299	758 aa		7.52	□□□□□ -1.21
MIA40	YKL195W	MAK16	P10962	306 aa	Predicted RBP	7.51	□□□□□ -1.21
MIA40	YKL195W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	7.51	□□□□□ -1.21	not detected
MIA40	YKL195W	YHL017W	P38745	532 aa		7.51	□□□□□ -1.21
MIA40	YKL195W	ICP55	P40051	511 aa		7.51	□□□□□ -1.21
MIA40	YKL195W	BUD6	P41697	788 aa		7.51	□□□□□ -1.21
MIA40	YKL195W	IRC8	P47046	822 aa		7.51	□□□□□ -1.21
MIA40	YKL195W	ALD2	P47771	506 aa		7.51	□□□□□ -1.21
MIA40	YKL195W	INM2	Q05533	292 aa		7.51	□□□□□ -1.21
MIA40	YKL195W	ELG1	Q12050	791 aa		7.51	□□□□□ -1.21
MIA40	YKL195W	CPA2	P03965	1118 aa	Known RBP	7.5	□□□□□ -1.21
MIA40	YKL195W	MATALPHA2	P0CY08	210 aa		7.5	□□□□□ -1.21
MIA40	YKL195W	HMLALPHA2	P0CY09	210 aa		7.5	□□□□□ -1.21
MIA40	YKL195W	FBP26	P32604	452 aa		7.5	□□□□□ -1.21
MIA40	YKL195W	FRD1	P32614	470 aa	Known RBP	7.5	□□□□□ -1.21

Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms