RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W CIT3P43635 486 aa4.02□□□□□ -1.77
MSL1YIR009W NUT1P53114 1132 aa4.02□□□□□ -1.77
MSL1YIR009W UTP22P53254 1237 aaPredicted RBP4.02□□□□□ -1.77
MSL1YIR009W GPI13Q07830 1017 aa4.02□□□□□ -1.77
MSL1YIR009W FRT1Q99332 602 aa4.02□□□□□ -1.77
MSL1YIR009W GEF1P37020 779 aa4.01□□□□□ -1.77
MSL1YIR009W YAF9P53930 226 aa4.01□□□□□ -1.77
MSL1YIR009W YBL113CQ7M4S9 792 aa4.01□□□□□ -1.77
MSL1YIR009W REI1P38344 393 aaPredicted RBP4□□□□□ -1.77
MSL1YIR009W NUT2Q06213 157 aa4□□□□□ -1.77
MSL1YIR009W PMT7Q06644 662 aa4□□□□□ -1.77
MSL1YIR009W INP54Q08227 384 aaKnown RBP4□□□□□ -1.77
MSL1YIR009W YOR059CQ08448 450 aaKnown RBP4□□□□□ -1.77
MSL1YIR009W TY1A-LR4P0C2I8 440 aaKnown RBP3.99□□□□□ -1.77
MSL1YIR009W RPS4AP0CX35 261 aaKnown RBP3.99□□□□□ -1.77
MSL1YIR009W RPS4BP0CX36 261 aaKnown RBP3.99□□□□□ -1.77
MSL1YIR009W TY1A-DR6P0CX70 440 aa3.99□□□□□ -1.77
MSL1YIR009W TY1A-ER1P0CX71 440 aa3.99□□□□□ -1.77
MSL1YIR009W TY1A-LR2P0CX72 440 aa3.99□□□□□ -1.77
MSL1YIR009W TY1A-PLP0CX73 440 aa3.99□□□□□ -1.77
MSL1YIR009W TY1A-JR1P0CX74 440 aa3.99□□□□□ -1.77
MSL1YIR009W TY1A-LR3P0CX75 440 aa3.99□□□□□ -1.77
MSL1YIR009W TY1A-ML2P0CX76 440 aa3.99□□□□□ -1.77
MSL1YIR009W LRG1P35688 1017 aa3.99□□□□□ -1.77
MSL1YIR009W MSH4P40965 878 aaPredicted RBP3.99□□□□□ -1.77
MSL1YIR009W ALT1P52893 592 aa3.99□□□□□ -1.77
MSL1YIR009W RCM1P53972 490 aa3.99□□□□□ -1.77
MSL1YIR009W ALG6Q12001 544 aaKnown RBP3.99□□□□□ -1.77
MSL1YIR009W TY1A-GR1Q12085 440 aa3.99□□□□□ -1.77
MSL1YIR009W HAT1Q12341 374 aa3.99□□□□□ -1.77
MSL1YIR009W TY1A-PR3Q6Q5H1 440 aaKnown RBP3.99□□□□□ -1.77
MSL1YIR009W TY1A-OLQ92392 440 aaKnown RBP3.99□□□□□ -1.77
MSL1YIR009W MCM5P29496 775 aaKnown RBP3.98□□□□□ -1.77
MSL1YIR009W RVS167P39743 482 aaKnown RBP3.98□□□□□ -1.77
MSL1YIR009W OYE3P41816 400 aaPredicted RBP3.98□□□□□ -1.77
MSL1YIR009W NSI1Q12457 570 aa3.98□□□□□ -1.77
MSL1YIR009W SEG2P34250 1132 aa3.97□□□□□ -1.77
MSL1YIR009W ARL1P38116 183 aaKnown RBP3.97□□□□□ -1.77
MSL1YIR009W POL12P38121 705 aaPredicted RBP3.97□□□□□ -1.77
MSL1YIR009W MON1P53129 644 aa3.97□□□□□ -1.77
MSL1YIR009W YGR045CP53229 120 aa3.97□□□□□ -1.77
MSL1YIR009W EAR1Q03212 550 aa3.97□□□□□ -1.77
MSL1YIR009W NOC3Q07896 663 aaPredicted RBP3.97□□□□□ -1.77
MSL1YIR009W DFG16Q99234 619 aa3.97□□□□□ -1.77
MSL1YIR009W RNQ1P25367 405 aa3.96□□□□□ -1.78
MSL1YIR009W EXO5P38289 585 aa3.96□□□□□ -1.78
MSL1YIR009W ECL1P48235 211 aa3.96□□□□□ -1.78
MSL1YIR009W NFS1P25374 497 aa3.95□□□□□ -1.78
MSL1YIR009W SMY2P32909 740 aaKnown RBP3.95□□□□□ -1.78
MSL1YIR009W HSP78P33416 811 aa3.95□□□□□ -1.78
MSL1YIR009W SAM37P50110 327 aa3.95□□□□□ -1.78
MSL1YIR009W ELA1P53861 379 aaPredicted RBP3.95□□□□□ -1.78
MSL1YIR009W YCS4Q06156 1176 aa3.95□□□□□ -1.78
MSL1YIR009W YVC1Q12324 675 aa3.95□□□□□ -1.78
MSL1YIR009W YKL077WP36081 392 aa3.94□□□□□ -1.78
MSL1YIR009W NEM1P38757 446 aa3.94□□□□□ -1.78
MSL1YIR009W PEX7P39108 375 aa3.94□□□□□ -1.78
MSL1YIR009W NIT1P40447 199 aa3.94□□□□□ -1.78
MSL1YIR009W SLS1P42900 643 aa3.94□□□□□ -1.78
MSL1YIR009W ORC3P54790 616 aa3.94□□□□□ -1.78
MSL1YIR009W NOG1Q02892 647 aaKnown RBP3.94□□□□□ -1.78
MSL1YIR009W TRE1Q08919 783 aa3.94□□□□□ -1.78
MSL1YIR009W ADP1P25371 1049 aa3.93□□□□□ -1.78
MSL1YIR009W NNK1P36003 928 aa3.93□□□□□ -1.78
MSL1YIR009W YHL050CP38721 697 aa3.93□□□□□ -1.78
MSL1YIR009W CIC1P38779 376 aaKnown RBP3.93□□□□□ -1.78
MSL1YIR009W YHR219WP38900 624 aa3.93□□□□□ -1.78
MSL1YIR009W SHU2P38957 223 aa3.93□□□□□ -1.78
MSL1YIR009W UBP5P39944 805 aa3.93□□□□□ -1.78
MSL1YIR009W AVO1Q08236 1176 aa3.93□□□□□ -1.78
MSL1YIR009W SSY1Q03770 852 aa3.92□□□□□ -1.78
MSL1YIR009W LPX1Q12405 387 aaKnown RBP3.92□□□□□ -1.78
MSL1YIR009W PHO4P07270 312 aaKnown RBP3.91□□□□□ -1.78
MSL1YIR009W GAS1P22146 559 aaKnown RBP3.91□□□□□ -1.78
MSL1YIR009W TSA1P34760 196 aaKnown RBP3.91□□□□□ -1.78
MSL1YIR009W CDA2Q06703 312 aa3.91□□□□□ -1.78
MSL1YIR009W PUS7Q08647 676 aaKnown RBP3.91□□□□□ -1.78
MSL1YIR009W MSH3P25336 1018 aa3.9□□□□□ -1.79
MSL1YIR009W PRO1P32264 428 aa3.9□□□□□ -1.79
MSL1YIR009W UGA4P32837 571 aa3.9□□□□□ -1.79
MSL1YIR009W PRP40P33203 583 aaKnown RBP3.9□□□□□ -1.79
MSL1YIR009W VPS35P34110 944 aa3.9□□□□□ -1.79
MSL1YIR009W SSF1P38789 453 aaPredicted RBP3.9□□□□□ -1.79
MSL1YIR009W YAR028WP39548 234 aa3.9□□□□□ -1.79
MSL1YIR009W MTR4P47047 1073 aaKnown RBP3.9□□□□□ -1.79
MSL1YIR009W PRP43P53131 767 aaKnown RBP3.9□□□□□ -1.79
MSL1YIR009W UTP5Q04177 643 aaKnown RBP3.9□□□□□ -1.79
MSL1YIR009W MET4P32389 672 aa3.89□□□□□ -1.79
MSL1YIR009W GCD6P32501 712 aaKnown RBP3.89□□□□□ -1.79
MSL1YIR009W PPX1P38698 397 aa3.89□□□□□ -1.79
MSL1YIR009W PTC7P38797 343 aa3.89□□□□□ -1.79
MSL1YIR009W TPP1Q03796 238 aa3.89□□□□□ -1.79
MSL1YIR009W XKS1P42826 600 aa3.88□□□□□ -1.79
MSL1YIR009W PEX13P80667 386 aa3.88□□□□□ -1.79
MSL1YIR009W ULP1Q02724 621 aa3.88□□□□□ -1.79
MSL1YIR009W DAL4Q04895 635 aa3.88□□□□□ -1.79
MSL1YIR009W YLR257WQ06146 321 aaKnown RBP3.88□□□□□ -1.79
MSL1YIR009W TOS4Q06266 489 aa3.88□□□□□ -1.79
MSL1YIR009W SAM35P14693 329 aa3.87□□□□□ -1.79
MSL1YIR009W KAR2P16474 682 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms