RNA–Protein interactions for RNA: YIL104C

SHQ1, Transcript of Chaperone protein, yeast

Gene SHQ1, Length 1,524 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHQ1	YIL104C	SSN3	P39073	555 aa		4.26	□□□□□ -1.73
SHQ1	YIL104C	VPS27	P40343	622 aa	Known RBP	4.26	□□□□□ -1.73
SHQ1	YIL104C	YNR014W	P53719	212 aa		4.26	□□□□□ -1.73
SHQ1	YIL104C	FCP1	Q03254	732 aa		4.26	□□□□□ -1.73
SHQ1	YIL104C	WTM2	Q12206	467 aa		4.26	□□□□□ -1.73
SHQ1	YIL104C	ERT1	P38140	529 aa		4.26	□□□□□ -1.73
SHQ1	YIL104C	MCX1	P38323	520 aa	Predicted RBP	4.26	□□□□□ -1.73
SHQ1	YIL104C	FUN12	P39730	1002 aa	Known RBP	4.26	□□□□□ -1.73
SHQ1	YIL104C	YFR016C	P43597	1233 aa	Known RBP	4.26	□□□□□ -1.73
SHQ1	YIL104C	DAT1	P13483	248 aa	Known RBP	4.25	□□□□□ -1.73
SHQ1	YIL104C	SWC3	P31376	625 aa		4.25	□□□□□ -1.73
SHQ1	YIL104C	CWH41	P53008	833 aa		4.25	□□□□□ -1.73
SHQ1	YIL104C	VPS64	Q03944	604 aa		4.25	□□□□□ -1.73
SHQ1	YIL104C	SSP2	Q08646	371 aa		4.25	□□□□□ -1.73
SHQ1	YIL104C	LYS2	P07702	1392 aa		4.24	□□□□□ -1.73
SHQ1	YIL104C	SPT2	P06843	333 aa	Predicted RBP	4.24	□□□□□ -1.73
SHQ1	YIL104C	LPD1	P09624	499 aa	Known RBP	4.24	□□□□□ -1.73
SHQ1	YIL104C	RAD24	P32641	659 aa		4.24	□□□□□ -1.73
SHQ1	YIL104C	YIL092W	P40497	633 aa		4.24	□□□□□ -1.73
SHQ1	YIL104C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
SHQ1	YIL104C	CDC45	Q08032	650 aa		4.24	□□□□□ -1.73
SHQ1	YIL104C	SMY1	P32364	656 aa	Known RBP	4.23	□□□□□ -1.73
SHQ1	YIL104C	UTR2	P32623	467 aa		4.23	□□□□□ -1.73
SHQ1	YIL104C	TBS1	P38114	1094 aa		4.23	□□□□□ -1.73
SHQ1	YIL104C	HPC2	Q01448	625 aa		4.23	□□□□□ -1.73
SHQ1	YIL104C	UBP16	Q02863	499 aa		4.23	□□□□□ -1.73
SHQ1	YIL104C	CSI1	Q04368	295 aa		4.23	□□□□□ -1.73
SHQ1	YIL104C	TY1A-DR3	Q12441	440 aa		4.23	□□□□□ -1.73
SHQ1	YIL104C	SSA1	P10591	642 aa	Known RBP	4.22	□□□□□ -1.73
SHQ1	YIL104C	MRP7	P12687	371 aa		4.22	□□□□□ -1.73
SHQ1	YIL104C	MDG1	P53885	366 aa		4.22	□□□□□ -1.73
SHQ1	YIL104C	DNM1	P54861	757 aa		4.22	□□□□□ -1.73
SHQ1	YIL104C	ISR1	Q06098	443 aa	Known RBP	4.22	□□□□□ -1.73
SHQ1	YIL104C	GPM1	P00950	247 aa	Known RBP	4.21	□□□□□ -1.73
SHQ1	YIL104C	CTT1	P06115	562 aa		4.21	□□□□□ -1.73
SHQ1	YIL104C	DAL5	P15365	543 aa		4.21	□□□□□ -1.73
SHQ1	YIL104C	FPS1	P23900	669 aa		4.21	□□□□□ -1.73
SHQ1	YIL104C	MET1	P36150	593 aa		4.21	□□□□□ -1.73
SHQ1	YIL104C	PFF1	P38244	976 aa		4.21	□□□□□ -1.73
SHQ1	YIL104C	BOI2	P39969	1040 aa		4.21	□□□□□ -1.73
SHQ1	YIL104C	YPP1	P46951	817 aa		4.21	□□□□□ -1.73
SHQ1	YIL104C	ITC1	P53125	1264 aa		4.21	□□□□□ -1.73
SHQ1	YIL104C	YKL222C	P35995	705 aa		4.21	□□□□□ -1.74
SHQ1	YIL104C	ALA1	P40825	983 aa	Known RBP	4.21	□□□□□ -1.74
SHQ1	YIL104C	RAT1	Q02792	1006 aa	Known RBP	4.21	□□□□□ -1.74
SHQ1	YIL104C	ERO1	Q03103	563 aa		4.21	□□□□□ -1.74
SHQ1	YIL104C	BDF2	Q07442	638 aa		4.21	□□□□□ -1.74
SHQ1	YIL104C	HAT1	Q12341	374 aa		4.21	□□□□□ -1.74
SHQ1	YIL104C	RIM15	P43565	1770 aa		4.2	□□□□□ -1.74
SHQ1	YIL104C	RET1	P22276	1149 aa	Known RBP	4.2	□□□□□ -1.74
SHQ1	YIL104C	YCK2	P23292	546 aa	Known RBP	4.2	□□□□□ -1.74
SHQ1	YIL104C	FRD1	P32614	470 aa	Known RBP	4.2	□□□□□ -1.74
SHQ1	YIL104C	NUP133	P36161	1157 aa		4.2	□□□□□ -1.74
SHQ1	YIL104C	SPL2	P38839	148 aa		4.2	□□□□□ -1.74
SHQ1	YIL104C	UBP12	P39538	1254 aa		4.2	□□□□□ -1.74
SHQ1	YIL104C	SYF1	Q04048	859 aa	Predicted RBP	4.2	□□□□□ -1.74
SHQ1	YIL104C	YDR215C	Q12240	137 aa		4.2	□□□□□ -1.74
SHQ1	YIL104C	SSK22	P25390	1331 aa	Predicted RBP	4.19	□□□□□ -1.74
SHQ1	YIL104C	RPS19A	P07280	144 aa	Known RBP	4.19	□□□□□ -1.74
SHQ1	YIL104C	RPS19B	P07281	144 aa	Predicted RBP	4.19	□□□□□ -1.74
SHQ1	YIL104C	ICL1	P28240	557 aa	Predicted RBP	4.19	□□□□□ -1.74
SHQ1	YIL104C	UTP7	P40055	554 aa	Known RBP	4.19	□□□□□ -1.74
SHQ1	YIL104C	SUM1	P46676	1062 aa		4.19	□□□□□ -1.74
SHQ1	YIL104C	GAS5	Q08193	484 aa		4.19	□□□□□ -1.74
SHQ1	YIL104C	IRE1	P32361	1115 aa		4.18	□□□□□ -1.74
SHQ1	YIL104C	EMP47	P43555	445 aa		4.18	□□□□□ -1.74
SHQ1	YIL104C	APL6	P46682	809 aa		4.18	□□□□□ -1.74
SHQ1	YIL104C	JJJ2	P46997	583 aa		4.18	□□□□□ -1.74
SHQ1	YIL104C	SPT5	P27692	1063 aa	Known RBP	4.17	□□□□□ -1.74
SHQ1	YIL104C	KRE2	P27809	442 aa		4.17	□□□□□ -1.74
SHQ1	YIL104C	MGM1	P32266	881 aa		4.17	□□□□□ -1.74
SHQ1	YIL104C	KTR3	P38130	404 aa	Predicted RBP	4.17	□□□□□ -1.74
SHQ1	YIL104C	AMN1	P38285	549 aa	Predicted RBP	4.17	□□□□□ -1.74
SHQ1	YIL104C	YER156C	P40093	338 aa	Known RBP	4.17	□□□□□ -1.74
SHQ1	YIL104C	LSB6	P42951	607 aa		4.17	□□□□□ -1.74
SHQ1	YIL104C	YRB30	P53107	440 aa	Predicted RBP	4.17	□□□□□ -1.74
SHQ1	YIL104C	PSH1	Q12161	406 aa		4.17	□□□□□ -1.74
SHQ1	YIL104C	LCB1	P25045	558 aa	Known RBP	4.16	□□□□□ -1.74
SHQ1	YIL104C	KNS1	P32350	737 aa	Predicted RBP	4.16	□□□□□ -1.74
SHQ1	YIL104C	TAT1	P38085	619 aa		4.16	□□□□□ -1.74
SHQ1	YIL104C	RPN1	P38764	993 aa	Known RBP	4.16	□□□□□ -1.74
SHQ1	YIL104C	POL32	P47110	350 aa		4.16	□□□□□ -1.74
SHQ1	YIL104C	PKH1	Q03407	766 aa		4.16	□□□□□ -1.74
SHQ1	YIL104C	TOS4	Q06266	489 aa		4.16	□□□□□ -1.74
SHQ1	YIL104C	DIB1	Q06819	143 aa	Predicted RBP	4.16	□□□□□ -1.74
SHQ1	YIL104C	MCM16	Q12262	181 aa		4.16	□□□□□ -1.74
SHQ1	YIL104C	GCD7	P32502	381 aa	Predicted RBP	4.16	□□□□□ -1.74
SHQ1	YIL104C	YKU70	P32807	602 aa		4.16	□□□□□ -1.74
SHQ1	YIL104C	NGR1	P32831	672 aa	Known RBP	4.16	□□□□□ -1.74
SHQ1	YIL104C	MRPL16	P38064	232 aa		4.16	□□□□□ -1.74
SHQ1	YIL104C	SLN1	P39928	1220 aa	Predicted RBP	4.16	□□□□□ -1.74
SHQ1	YIL104C	ATG3	P40344	310 aa		4.16	□□□□□ -1.74
SHQ1	YIL104C	RPT4	P53549	437 aa	Known RBP	4.16	□□□□□ -1.74
SHQ1	YIL104C	SQS1	P53866	767 aa	Known RBP	4.16	□□□□□ -1.74
SHQ1	YIL104C	IRC3	Q06683	689 aa		4.16	□□□□□ -1.74
SHQ1	YIL104C	THI3	Q07471	609 aa		4.16	□□□□□ -1.74
SHQ1	YIL104C	PDC5	P16467	563 aa	Known RBP	4.15	□□□□□ -1.75
SHQ1	YIL104C	SEC18	P18759	758 aa	Known RBP	4.15	□□□□□ -1.75
SHQ1	YIL104C	ISF1	P32488	338 aa		4.15	□□□□□ -1.75
SHQ1	YIL104C	MAC1	P35192	417 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms