RNA–Protein interactions for RNA: YIL093C

RSM25, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene RSM25, Length 795 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSM25	YIL093C	YPL109C	Q02981	657 aa		4.91	□□□□□ -1.62
RSM25	YIL093C	POB3	Q04636	552 aa	Known RBP	4.91	□□□□□ -1.62
RSM25	YIL093C	SOG2	Q08817	791 aa		4.91	□□□□□ -1.62
RSM25	YIL093C	OXR1	Q08952	273 aa		4.91	□□□□□ -1.62
RSM25	YIL093C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
RSM25	YIL093C	YKL091C	P33324	310 aa	Known RBP	4.9	□□□□□ -1.63
RSM25	YIL093C	RPN4	Q03465	531 aa		4.9	□□□□□ -1.63
RSM25	YIL093C	NAR1	P23503	491 aa	Known RBP	4.89	□□□□□ -1.63
RSM25	YIL093C	KNS1	P32350	737 aa	Predicted RBP	4.89	□□□□□ -1.63
RSM25	YIL093C	ECM2	P38241	364 aa	Known RBP	4.89	□□□□□ -1.63
RSM25	YIL093C	PMC1	P38929	1173 aa	Predicted RBP	4.89	□□□□□ -1.63
RSM25	YIL093C	RVS167	P39743	482 aa	Known RBP	4.89	□□□□□ -1.63
RSM25	YIL093C	VAC8	P39968	578 aa		4.89	□□□□□ -1.63
RSM25	YIL093C	LSB6	P42951	607 aa		4.89	□□□□□ -1.63
RSM25	YIL093C	SOK2	P53438	785 aa	Predicted RBP	4.89	□□□□□ -1.63
RSM25	YIL093C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
RSM25	YIL093C	NSE3	Q05541	303 aa		4.89	□□□□□ -1.63
RSM25	YIL093C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
RSM25	YIL093C	YGR035C	P53222	116 aa		4.88	□□□□□ -1.63
RSM25	YIL093C	ADI1	Q03677	179 aa		4.88	□□□□□ -1.63
RSM25	YIL093C	GIS4	Q04233	774 aa		4.88	□□□□□ -1.63
RSM25	YIL093C	DPH6	Q12429	685 aa		4.88	□□□□□ -1.63
RSM25	YIL093C	HEM13	P11353	328 aa	Known RBP	4.87	□□□□□ -1.63
RSM25	YIL093C	PRE9	P23638	258 aa	Known RBP	4.87	□□□□□ -1.63
RSM25	YIL093C	PEP7	P32609	515 aa		4.87	□□□□□ -1.63
RSM25	YIL093C	GRX4	P32642	244 aa		4.87	□□□□□ -1.63
RSM25	YIL093C	BUD6	P41697	788 aa		4.87	□□□□□ -1.63
RSM25	YIL093C	HAS1	Q03532	505 aa	Known RBP	4.87	□□□□□ -1.63
RSM25	YIL093C	PMT7	Q06644	662 aa		4.87	□□□□□ -1.63
RSM25	YIL093C	PGM2	P37012	569 aa	Known RBP	4.86	□□□□□ -1.63
RSM25	YIL093C	GIP2	P40036	548 aa		4.86	□□□□□ -1.63
RSM25	YIL093C	MRPS18	P42847	217 aa		4.86	□□□□□ -1.63
RSM25	YIL093C	GUP1	P53154	560 aa		4.86	□□□□□ -1.63
RSM25	YIL093C	ALD6	P54115	500 aa	Known RBP	4.86	□□□□□ -1.63
RSM25	YIL093C	NOG1	Q02892	647 aa	Known RBP	4.86	□□□□□ -1.63
RSM25	YIL093C	VPS16	Q03308	798 aa		4.86	□□□□□ -1.63
RSM25	YIL093C	RMD1	Q03441	430 aa		4.86	□□□□□ -1.63
RSM25	YIL093C	YOL057W	Q08225	711 aa		4.86	□□□□□ -1.63
RSM25	YIL093C	PIN2	Q12057	282 aa		4.86	□□□□□ -1.63
RSM25	YIL093C	SSF2	Q12153	453 aa	Predicted RBP	4.86	□□□□□ -1.63
RSM25	YIL093C	TY4B-P	A0A0B7P3V8	1104 aa		4.85	□□□□□ -1.63
RSM25	YIL093C	KAR2	P16474	682 aa	Known RBP	4.85	□□□□□ -1.63
RSM25	YIL093C	TED1	P40533	473 aa		4.85	□□□□□ -1.63
RSM25	YIL093C	YFL066C	P43538	392 aa		4.85	□□□□□ -1.63
RSM25	YIL093C	YPL062W	Q02781	134 aa		4.85	□□□□□ -1.63
RSM25	YIL093C	YDL121C	Q07541	149 aa		4.85	□□□□□ -1.63
RSM25	YIL093C	TY4A-H	Q6Q5P6	413 aa		4.85	□□□□□ -1.63
RSM25	YIL093C	HTS1	P07263	546 aa	Known RBP	4.84	□□□□□ -1.63
RSM25	YIL093C	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.84	□□□□□ -1.63
RSM25	YIL093C	TY1A-DR6	P0CX70	440 aa		4.84	□□□□□ -1.63
RSM25	YIL093C	TY1A-ER1	P0CX71	440 aa		4.84	□□□□□ -1.63
RSM25	YIL093C	TY1A-LR2	P0CX72	440 aa		4.84	□□□□□ -1.63
RSM25	YIL093C	TY1A-PL	P0CX73	440 aa		4.84	□□□□□ -1.63
RSM25	YIL093C	TY1A-JR1	P0CX74	440 aa		4.84	□□□□□ -1.63
RSM25	YIL093C	TY1A-LR3	P0CX75	440 aa		4.84	□□□□□ -1.63
RSM25	YIL093C	TY1A-ML2	P0CX76	440 aa		4.84	□□□□□ -1.63
RSM25	YIL093C	CLN2	P20438	545 aa		4.84	□□□□□ -1.63
RSM25	YIL093C	VMA4	P22203	233 aa	Known RBP	4.84	□□□□□ -1.63
RSM25	YIL093C	TRK2	P28584	889 aa		4.84	□□□□□ -1.63
RSM25	YIL093C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
RSM25	YIL093C	ALG14	P38242	237 aa		4.84	□□□□□ -1.63
RSM25	YIL093C	EXO5	P38289	585 aa		4.84	□□□□□ -1.63
RSM25	YIL093C	PAN5	P38787	379 aa		4.84	□□□□□ -1.63
RSM25	YIL093C	PEX28	P38848	579 aa		4.84	□□□□□ -1.63
RSM25	YIL093C	SBE2	P42223	864 aa	Known RBP	4.84	□□□□□ -1.63
RSM25	YIL093C	TY4A-J	P47023	414 aa		4.84	□□□□□ -1.63
RSM25	YIL093C	TMA64	Q04600	565 aa	Known RBP	4.84	□□□□□ -1.63
RSM25	YIL093C	ESF1	Q06344	628 aa	Known RBP	4.84	□□□□□ -1.63
RSM25	YIL093C	BRE1	Q07457	700 aa	Known RBP	4.84	□□□□□ -1.63
RSM25	YIL093C	TY1A-GR1	Q12085	440 aa		4.84	□□□□□ -1.63
RSM25	YIL093C	MCD1	Q12158	566 aa		4.84	□□□□□ -1.63
RSM25	YIL093C	REC8	Q12188	680 aa		4.84	□□□□□ -1.63
RSM25	YIL093C	YGR161W-C	Q3E744	92 aa		4.84	□□□□□ -1.63
RSM25	YIL093C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.84	□□□□□ -1.63
RSM25	YIL093C	TY1A-OL	Q92392	440 aa	Known RBP	4.84	□□□□□ -1.63
RSM25	YIL093C	GCR1	P07261	785 aa		4.83	□□□□□ -1.64
RSM25	YIL093C	DUT1	P33317	147 aa		4.83	□□□□□ -1.64
RSM25	YIL093C	ENP1	P38333	483 aa	Known RBP	4.83	□□□□□ -1.64
RSM25	YIL093C	BOI2	P39969	1040 aa		4.83	□□□□□ -1.64
RSM25	YIL093C	POL5	P39985	1022 aa	Known RBP	4.83	□□□□□ -1.64
RSM25	YIL093C	NEO1	P40527	1151 aa		4.83	□□□□□ -1.64
RSM25	YIL093C	MAD1	P40957	749 aa		4.83	□□□□□ -1.64
RSM25	YIL093C	FET4	P40988	552 aa		4.83	□□□□□ -1.64
RSM25	YIL093C	YGL140C	P53120	1219 aa		4.83	□□□□□ -1.64
RSM25	YIL093C	PEX13	P80667	386 aa		4.83	□□□□□ -1.64
RSM25	YIL093C	CEF1	Q03654	590 aa	Predicted RBP	4.83	□□□□□ -1.64
RSM25	YIL093C	UTP14	Q04500	899 aa	Known RBP	4.83	□□□□□ -1.64
RSM25	YIL093C	MSH3	P25336	1018 aa		4.82	□□□□□ -1.64
RSM25	YIL093C	RDH54	P38086	958 aa		4.82	□□□□□ -1.64
RSM25	YIL093C	NEM1	P38757	446 aa		4.82	□□□□□ -1.64
RSM25	YIL093C	MNN1	P39106	762 aa		4.82	□□□□□ -1.64
RSM25	YIL093C	UBP12	P39538	1254 aa		4.82	□□□□□ -1.64
RSM25	YIL093C	SLS1	P42900	643 aa		4.82	□□□□□ -1.64
RSM25	YIL093C	YJR142W	P47173	342 aa		4.82	□□□□□ -1.64
RSM25	YIL093C	GNP1	P48813	663 aa		4.82	□□□□□ -1.64
RSM25	YIL093C	GAL11	P19659	1081 aa		4.81	□□□□□ -1.64
RSM25	YIL093C	MDJ1	P35191	511 aa		4.81	□□□□□ -1.64
RSM25	YIL093C	XKS1	P42826	600 aa		4.81	□□□□□ -1.64
RSM25	YIL093C	KRI1	P42846	591 aa	Known RBP	4.81	□□□□□ -1.64
RSM25	YIL093C	BDF2	Q07442	638 aa		4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms