RNA–Protein interactions for RNA: YIL082W

YIL082W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeast

Gene YIL082W, Length 873 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YIL082W	YIL082W	RCM1	P53972	490 aa		5.75	□□□□□ -1.49
YIL082W	YIL082W	NUT2	Q06213	157 aa		5.74	□□□□□ -1.49
YIL082W	YIL082W	CDA2	Q06703	312 aa		5.74	□□□□□ -1.49
YIL082W	YIL082W	FRT1	Q99332	602 aa		5.74	□□□□□ -1.49
YIL082W	YIL082W	GCV1	P48015	400 aa		5.73	□□□□□ -1.49
YIL082W	YIL082W	PRP43	P53131	767 aa	Known RBP	5.73	□□□□□ -1.49
YIL082W	YIL082W	CDC55	Q00362	526 aa		5.73	□□□□□ -1.49
YIL082W	YIL082W	NSI1	Q12457	570 aa		5.73	□□□□□ -1.49
YIL082W	YIL082W	DUR3	P33413	735 aa		5.72	□□□□□ -1.49
YIL082W	YIL082W	TSA1	P34760	196 aa	Known RBP	5.72	□□□□□ -1.49
YIL082W	YIL082W	YKL222C	P35995	705 aa		5.72	□□□□□ -1.49
YIL082W	YIL082W	RIM11	P38615	370 aa		5.72	□□□□□ -1.49
YIL082W	YIL082W	BSC2	Q05611	235 aa		5.72	□□□□□ -1.49
YIL082W	YIL082W	GPI13	Q07830	1017 aa		5.72	□□□□□ -1.49
YIL082W	YIL082W	YIG1	Q08956	461 aa		5.72	□□□□□ -1.49
YIL082W	YIL082W	NPR1	P22211	790 aa		5.71	□□□□□ -1.5
YIL082W	YIL082W	ECM2	P38241	364 aa	Known RBP	5.71	□□□□□ -1.5
YIL082W	YIL082W	TAF1	P46677	1066 aa		5.71	□□□□□ -1.5
YIL082W	YIL082W	EAR1	Q03212	550 aa		5.71	□□□□□ -1.5
YIL082W	YIL082W	ESC8	Q08119	714 aa		5.71	□□□□□ -1.5
YIL082W	YIL082W	YOR059C	Q08448	450 aa	Known RBP	5.71	□□□□□ -1.5
YIL082W	YIL082W	CMR1	Q12510	522 aa	Known RBP	5.71	□□□□□ -1.5
YIL082W	YIL082W	HTS1	P07263	546 aa	Known RBP	5.7	□□□□□ -1.5
YIL082W	YIL082W	RPS4A	P0CX35	261 aa	Known RBP	5.7	□□□□□ -1.5
YIL082W	YIL082W	RPS4B	P0CX36	261 aa	Known RBP	5.7	□□□□□ -1.5
YIL082W	YIL082W	SSF1	P38789	453 aa	Predicted RBP	5.7	□□□□□ -1.5
YIL082W	YIL082W	YLL054C	Q12244	843 aa		5.7	□□□□□ -1.5
YIL082W	YIL082W	FLP1	P03870	423 aa		5.69	□□□□□ -1.5
YIL082W	YIL082W	MSH4	P40965	878 aa	Predicted RBP	5.69	□□□□□ -1.5
YIL082W	YIL082W	ALG6	Q12001	544 aa	Known RBP	5.69	□□□□□ -1.5
YIL082W	YIL082W	YHL050C	P38721	697 aa		5.68	□□□□□ -1.5
YIL082W	YIL082W	YHR219W	P38900	624 aa		5.68	□□□□□ -1.5
YIL082W	YIL082W	ALT1	P52893	592 aa		5.68	□□□□□ -1.5
YIL082W	YIL082W	MSH6	Q03834	1242 aa		5.68	□□□□□ -1.5
YIL082W	YIL082W	PRP5	P21372	849 aa	Predicted RBP	5.67	□□□□□ -1.5
YIL082W	YIL082W	THI80	P35202	319 aa		5.67	□□□□□ -1.5
YIL082W	YIL082W	MEC3	Q02574	474 aa		5.67	□□□□□ -1.5
YIL082W	YIL082W	SSY1	Q03770	852 aa		5.67	□□□□□ -1.5
YIL082W	YIL082W	INP54	Q08227	384 aa	Known RBP	5.67	□□□□□ -1.5
YIL082W	YIL082W	ADP1	P25371	1049 aa		5.66	□□□□□ -1.5
YIL082W	YIL082W	NUT1	P53114	1132 aa		5.66	□□□□□ -1.5
YIL082W	YIL082W	REI1	P38344	393 aa	Predicted RBP	5.65	□□□□□ -1.5
YIL082W	YIL082W	PEX7	P39108	375 aa		5.65	□□□□□ -1.5
YIL082W	YIL082W	SAP155	P43612	1002 aa		5.65	□□□□□ -1.5
YIL082W	YIL082W	SAM37	P50110	327 aa		5.65	□□□□□ -1.5
YIL082W	YIL082W	UTP22	P53254	1237 aa	Predicted RBP	5.65	□□□□□ -1.5
YIL082W	YIL082W	ORC3	P54790	616 aa		5.65	□□□□□ -1.5
YIL082W	YIL082W	NOC3	Q07896	663 aa	Predicted RBP	5.65	□□□□□ -1.5
YIL082W	YIL082W	TRE1	Q08919	783 aa		5.65	□□□□□ -1.5
YIL082W	YIL082W	YVC1	Q12324	675 aa		5.65	□□□□□ -1.5
YIL082W	YIL082W	LPX1	Q12405	387 aa	Known RBP	5.65	□□□□□ -1.5
YIL082W	YIL082W	GIP4	P39732	760 aa		5.64	□□□□□ -1.51
YIL082W	YIL082W	STM1	P39015	273 aa	Known RBP	5.63	□□□□□ -1.51
YIL082W	YIL082W	MON1	P53129	644 aa		5.63	□□□□□ -1.51
YIL082W	YIL082W	PMT7	Q06644	662 aa		5.63	□□□□□ -1.51
YIL082W	YIL082W	PRO1	P32264	428 aa		5.62	□□□□□ -1.51
YIL082W	YIL082W	YAF9	P53930	226 aa		5.62	□□□□□ -1.51
YIL082W	YIL082W	MSC6	Q08818	692 aa	Known RBP	5.62	□□□□□ -1.51
YIL082W	YIL082W	MCM5	P29496	775 aa	Known RBP	5.61	□□□□□ -1.51
YIL082W	YIL082W	PPX1	P38698	397 aa		5.61	□□□□□ -1.51
YIL082W	YIL082W	CIC1	P38779	376 aa	Known RBP	5.61	□□□□□ -1.51
YIL082W	YIL082W	RVS167	P39743	482 aa	Known RBP	5.61	□□□□□ -1.51
YIL082W	YIL082W	YGR045C	P53229	120 aa		5.61	□□□□□ -1.51
YIL082W	YIL082W	ELA1	P53861	379 aa	Predicted RBP	5.61	□□□□□ -1.51
YIL082W	YIL082W	PHO4	P07270	312 aa	Known RBP	5.6	□□□□□ -1.51
YIL082W	YIL082W	TY1A-LR4	P0C2I8	440 aa	Known RBP	5.6	□□□□□ -1.51
YIL082W	YIL082W	TY1A-DR6	P0CX70	440 aa		5.6	□□□□□ -1.51
YIL082W	YIL082W	TY1A-ER1	P0CX71	440 aa		5.6	□□□□□ -1.51
YIL082W	YIL082W	TY1A-LR2	P0CX72	440 aa		5.6	□□□□□ -1.51
YIL082W	YIL082W	TY1A-PL	P0CX73	440 aa		5.6	□□□□□ -1.51
YIL082W	YIL082W	TY1A-JR1	P0CX74	440 aa		5.6	□□□□□ -1.51
YIL082W	YIL082W	TY1A-LR3	P0CX75	440 aa		5.6	□□□□□ -1.51
YIL082W	YIL082W	TY1A-ML2	P0CX76	440 aa		5.6	□□□□□ -1.51
YIL082W	YIL082W	PRP6	P19735	899 aa	Predicted RBP	5.6	□□□□□ -1.51
YIL082W	YIL082W	NFS1	P25374	497 aa		5.6	□□□□□ -1.51
YIL082W	YIL082W	MET4	P32389	672 aa		5.6	□□□□□ -1.51
YIL082W	YIL082W	YCS4	Q06156	1176 aa		5.6	□□□□□ -1.51
YIL082W	YIL082W	TY1A-GR1	Q12085	440 aa		5.6	□□□□□ -1.51
YIL082W	YIL082W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	5.6	□□□□□ -1.51
YIL082W	YIL082W	TY1A-OL	Q92392	440 aa	Known RBP	5.6	□□□□□ -1.51
YIL082W	YIL082W	SMY2	P32909	740 aa	Known RBP	5.59	□□□□□ -1.51
YIL082W	YIL082W	FLR1	P38124	548 aa		5.59	□□□□□ -1.51
YIL082W	YIL082W	PTC7	P38797	343 aa		5.59	□□□□□ -1.51
YIL082W	YIL082W	WHI5	Q12416	295 aa		5.59	□□□□□ -1.51
YIL082W	YIL082W	VPS35	P34110	944 aa		5.58	□□□□□ -1.52
YIL082W	YIL082W	AIM3	P38266	947 aa	Known RBP	5.58	□□□□□ -1.52
YIL082W	YIL082W	YDL177C	Q12257	170 aa		5.58	□□□□□ -1.52
YIL082W	YIL082W	GCD6	P32501	712 aa	Known RBP	5.57	□□□□□ -1.52
YIL082W	YIL082W	THI12	P42883	340 aa		5.57	□□□□□ -1.52
YIL082W	YIL082W	THI5	P43534	340 aa		5.57	□□□□□ -1.52
YIL082W	YIL082W	THI11	P47183	340 aa		5.57	□□□□□ -1.52
YIL082W	YIL082W	THI13	Q07748	340 aa		5.57	□□□□□ -1.52
YIL082W	YIL082W	SEC20	P28791	383 aa		5.56	□□□□□ -1.52
YIL082W	YIL082W	IPL1	P38991	367 aa		5.56	□□□□□ -1.52
YIL082W	YIL082W	GTS1	P40956	396 aa		5.56	□□□□□ -1.52
YIL082W	YIL082W	SEN54	Q02825	467 aa	Predicted RBP	5.56	□□□□□ -1.52
YIL082W	YIL082W	PRP40	P33203	583 aa	Known RBP	5.55	□□□□□ -1.52
YIL082W	YIL082W	NNK1	P36003	928 aa		5.55	□□□□□ -1.52
YIL082W	YIL082W	DAK2	P43550	591 aa		5.55	□□□□□ -1.52
YIL082W	YIL082W	AVO1	Q08236	1176 aa		5.55	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms