RNA–Protein interactions for RNA: YHR003C

TCD1, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeastyeast

Gene TCD1, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCD1YHR003C YMR074CQ04773 145 aa4.37□□□□□ -1.71
TCD1YHR003C THI13Q07748 340 aa4.37□□□□□ -1.71
TCD1YHR003C WHI5Q12416 295 aa4.37□□□□□ -1.71
TCD1YHR003C KAE1P36132 386 aa4.36□□□□□ -1.71
TCD1YHR003C MON1P53129 644 aa4.36□□□□□ -1.71
TCD1YHR003C YOR223WQ12015 292 aa4.36□□□□□ -1.71
TCD1YHR003C SHU2P38957 223 aa4.35□□□□□ -1.71
TCD1YHR003C IPL1P38991 367 aa4.35□□□□□ -1.71
TCD1YHR003C AKR1P39010 764 aa4.35□□□□□ -1.71
TCD1YHR003C MEC3Q02574 474 aa4.35□□□□□ -1.71
TCD1YHR003C YML020WQ03722 664 aa4.35□□□□□ -1.71
TCD1YHR003C PUF3Q07807 879 aaKnown RBP RIP-Chip data4.35□□□□□ -1.71not detected
TCD1YHR003C OXR1Q08952 273 aa4.35□□□□□ -1.71
TCD1YHR003C CHS2P14180 963 aa4.34□□□□□ -1.71
TCD1YHR003C KAR2P16474 682 aaKnown RBP4.34□□□□□ -1.71
TCD1YHR003C NAM7P30771 971 aaKnown RBP4.34□□□□□ -1.71
TCD1YHR003C YKL077WP36081 392 aa4.34□□□□□ -1.71
TCD1YHR003C ARL1P38116 183 aaKnown RBP4.34□□□□□ -1.71
TCD1YHR003C DAK2P43550 591 aa4.34□□□□□ -1.71
TCD1YHR003C GIC2Q06648 383 aa4.34□□□□□ -1.71
TCD1YHR003C YLR122CQ12312 125 aa4.34□□□□□ -1.71
TCD1YHR003C PRP40P33203 583 aaKnown RBP4.33□□□□□ -1.72
TCD1YHR003C NOP8Q08287 484 aaPredicted RBP4.33□□□□□ -1.72
TCD1YHR003C REI1P38344 393 aaPredicted RBP4.32□□□□□ -1.72
TCD1YHR003C NOG1Q02892 647 aaKnown RBP4.32□□□□□ -1.72
TCD1YHR003C DOT1Q04089 582 aaKnown RBP4.32□□□□□ -1.72
TCD1YHR003C DAL4Q04895 635 aa4.32□□□□□ -1.72
TCD1YHR003C MED7Q08278 222 aa4.32□□□□□ -1.72
TCD1YHR003C MSB1P21339 1137 aaKnown RBP4.31□□□□□ -1.72
TCD1YHR003C RPT1P33299 467 aaKnown RBP4.31□□□□□ -1.72
TCD1YHR003C GPT2P36148 743 aa4.31□□□□□ -1.72
TCD1YHR003C EXO5P38289 585 aa4.31□□□□□ -1.72
TCD1YHR003C ALO1P54783 526 aaKnown RBP4.31□□□□□ -1.72
TCD1YHR003C TY1A-LR4P0C2I8 440 aaKnown RBP4.3□□□□□ -1.72
TCD1YHR003C TY1A-DR6P0CX70 440 aa4.3□□□□□ -1.72
TCD1YHR003C TY1A-ER1P0CX71 440 aa4.3□□□□□ -1.72
TCD1YHR003C TY1A-LR2P0CX72 440 aa4.3□□□□□ -1.72
TCD1YHR003C TY1A-PLP0CX73 440 aa4.3□□□□□ -1.72
TCD1YHR003C TY1A-JR1P0CX74 440 aa4.3□□□□□ -1.72
TCD1YHR003C TY1A-LR3P0CX75 440 aa4.3□□□□□ -1.72
TCD1YHR003C TY1A-ML2P0CX76 440 aa4.3□□□□□ -1.72
TCD1YHR003C HEM3P28789 327 aa4.3□□□□□ -1.72
TCD1YHR003C SPO74P45819 413 aa4.3□□□□□ -1.72
TCD1YHR003C YGR130CP53278 816 aa4.3□□□□□ -1.72
TCD1YHR003C ULP1Q02724 621 aa4.3□□□□□ -1.72
TCD1YHR003C TY1A-GR1Q12085 440 aa4.3□□□□□ -1.72
TCD1YHR003C TY1A-PR3Q6Q5H1 440 aaKnown RBP4.3□□□□□ -1.72
TCD1YHR003C TY1A-OLQ92392 440 aaKnown RBP4.3□□□□□ -1.72
TCD1YHR003C TRP3P00937 484 aa4.29□□□□□ -1.72
TCD1YHR003C MSH3P25336 1018 aa4.29□□□□□ -1.72
TCD1YHR003C SQT1P35184 431 aa4.29□□□□□ -1.72
TCD1YHR003C MAC1P35192 417 aa4.29□□□□□ -1.72
TCD1YHR003C OMA1P36163 345 aa4.29□□□□□ -1.72
TCD1YHR003C MGE1P38523 228 aa4.29□□□□□ -1.72
TCD1YHR003C MMM1P41800 426 aa4.29□□□□□ -1.72
TCD1YHR003C MTR4P47047 1073 aaKnown RBP4.29□□□□□ -1.72
TCD1YHR003C RSM26P47141 266 aa4.29□□□□□ -1.72
TCD1YHR003C INP52P50942 1183 aa4.29□□□□□ -1.72
TCD1YHR003C AVO1Q08236 1176 aa4.29□□□□□ -1.72
TCD1YHR003C ALG6Q12001 544 aaKnown RBP4.29□□□□□ -1.72
TCD1YHR003C CYC7P00045 113 aa4.28□□□□□ -1.72
TCD1YHR003C HXK1P04806 485 aaKnown RBP4.28□□□□□ -1.72
TCD1YHR003C UGA4P32837 571 aa4.28□□□□□ -1.72
TCD1YHR003C YKR073CP36153 106 aa4.28□□□□□ -1.72
TCD1YHR003C SLS1P42900 643 aa4.28□□□□□ -1.72
TCD1YHR003C POL32P47110 350 aa4.28□□□□□ -1.72
TCD1YHR003C YGR045CP53229 120 aa4.28□□□□□ -1.72
TCD1YHR003C NRD1P53617 575 aaKnown RBP RIP-Chip data4.28□□□□□ -1.72not detected
TCD1YHR003C PEX13P80667 386 aa4.28□□□□□ -1.72
TCD1YHR003C ADI1Q03677 179 aa4.28□□□□□ -1.72
TCD1YHR003C TOS4Q06266 489 aa4.28□□□□□ -1.72
TCD1YHR003C YOR059CQ08448 450 aaKnown RBP4.28□□□□□ -1.72
TCD1YHR003C VMA4P22203 233 aaKnown RBP4.27□□□□□ -1.73
TCD1YHR003C TOS1P38288 455 aa4.27□□□□□ -1.73
TCD1YHR003C NEM1P38757 446 aa4.27□□□□□ -1.73
TCD1YHR003C PEX28P38848 579 aa4.27□□□□□ -1.73
TCD1YHR003C MSH4P40965 878 aaPredicted RBP4.27□□□□□ -1.73
TCD1YHR003C CIT3P43635 486 aa4.27□□□□□ -1.73
TCD1YHR003C YGR122WP53272 402 aa4.27□□□□□ -1.73
TCD1YHR003C YPL109CQ02981 657 aa4.27□□□□□ -1.73
TCD1YHR003C ECM5Q03214 1411 aa4.27□□□□□ -1.73
TCD1YHR003C RPS4AP0CX35 261 aaKnown RBP4.26□□□□□ -1.73
TCD1YHR003C RPS4BP0CX36 261 aaKnown RBP4.26□□□□□ -1.73
TCD1YHR003C ASF1P32447 279 aa4.26□□□□□ -1.73
TCD1YHR003C PUB1P32588 453 aaKnown RBP RIP-Chip data4.26□□□□□ -1.73not detected
TCD1YHR003C SMY2P32909 740 aaKnown RBP4.26□□□□□ -1.73
TCD1YHR003C WHI3P34761 661 aaKnown RBP4.26□□□□□ -1.73
TCD1YHR003C NNK1P36003 928 aa4.26□□□□□ -1.73
TCD1YHR003C FAA3P39002 694 aa4.26□□□□□ -1.73
TCD1YHR003C ALT1P52893 592 aa4.26□□□□□ -1.73
TCD1YHR003C ELA1P53861 379 aaPredicted RBP4.26□□□□□ -1.73
TCD1YHR003C UTP5Q04177 643 aaKnown RBP4.26□□□□□ -1.73
TCD1YHR003C MCD1Q12158 566 aa4.26□□□□□ -1.73
TCD1YHR003C NSI1Q12457 570 aa4.26□□□□□ -1.73
TCD1YHR003C NFS1P25374 497 aa4.25□□□□□ -1.73
TCD1YHR003C ATG14P38270 344 aa4.25□□□□□ -1.73
TCD1YHR003C YAR028WP39548 234 aa4.25□□□□□ -1.73
TCD1YHR003C MRPS18P42847 217 aa4.25□□□□□ -1.73
TCD1YHR003C YGL140CP53120 1219 aa4.25□□□□□ -1.73
TCD1YHR003C LAP2Q10740 671 aa4.25□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 52.5 ms