RNA–Protein interactions for RNA: YGL011C

SCL1, Transcript of Alpha 1 subunit of the 20S proteasome, yeastyeast

Gene SCL1, Length 759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCL1YGL011C TY1A-GR1Q12085 440 aa6.94□□□□□ -1.3
SCL1YGL011C TY1A-PR3Q6Q5H1 440 aaKnown RBP6.94□□□□□ -1.3
SCL1YGL011C TY1A-OLQ92392 440 aaKnown RBP6.94□□□□□ -1.3
SCL1YGL011C MSH3P25336 1018 aa6.93□□□□□ -1.3
SCL1YGL011C EXO5P38289 585 aa6.93□□□□□ -1.3
SCL1YGL011C PAN5P38787 379 aa6.93□□□□□ -1.3
SCL1YGL011C XKS1P42826 600 aa6.93□□□□□ -1.3
SCL1YGL011C ALD6P54115 500 aaKnown RBP6.93□□□□□ -1.3
SCL1YGL011C CLN2P20438 545 aa6.92□□□□□ -1.3
SCL1YGL011C MNR2P35724 969 aa6.92□□□□□ -1.3
SCL1YGL011C YGL140CP53120 1219 aa6.92□□□□□ -1.3
SCL1YGL011C GCR1P07261 785 aa6.91□□□□□ -1.3
SCL1YGL011C SEC23P15303 768 aaKnown RBP6.91□□□□□ -1.3
SCL1YGL011C SHU2P38957 223 aa6.91□□□□□ -1.3
SCL1YGL011C SLP1Q12232 587 aa6.91□□□□□ -1.3
SCL1YGL011C HEM13P11353 328 aaKnown RBP6.9□□□□□ -1.3
SCL1YGL011C VAC8P39968 578 aa6.9□□□□□ -1.3
SCL1YGL011C LEM3P42838 414 aa6.9□□□□□ -1.3
SCL1YGL011C MRL1Q06815 381 aa6.9□□□□□ -1.3
SCL1YGL011C YIG1Q08956 461 aa6.9□□□□□ -1.3
SCL1YGL011C DUT1P33317 147 aa6.89□□□□□ -1.31
SCL1YGL011C YKL077WP36081 392 aa6.89□□□□□ -1.31
SCL1YGL011C SPO71Q03868 1245 aa6.89□□□□□ -1.31
SCL1YGL011C NHA1Q99271 985 aa6.89□□□□□ -1.31
SCL1YGL011C CDC34P14682 295 aa6.88□□□□□ -1.31
SCL1YGL011C SBE2P42223 864 aaKnown RBP6.88□□□□□ -1.31
SCL1YGL011C GNP1P48813 663 aa6.88□□□□□ -1.31
SCL1YGL011C UTP22P53254 1237 aaPredicted RBP6.88□□□□□ -1.31
SCL1YGL011C RDH54P38086 958 aa6.87□□□□□ -1.31
SCL1YGL011C NEM1P38757 446 aa6.87□□□□□ -1.31
SCL1YGL011C POL5P39985 1022 aaKnown RBP6.87□□□□□ -1.31
SCL1YGL011C FAA4P47912 694 aaKnown RBP6.87□□□□□ -1.31
SCL1YGL011C CWC24P53769 259 aa6.87□□□□□ -1.31
SCL1YGL011C YPL062WQ02781 134 aa6.87□□□□□ -1.31
SCL1YGL011C HDA2Q06629 674 aa6.87□□□□□ -1.31
SCL1YGL011C REC8Q12188 680 aa6.87□□□□□ -1.31
SCL1YGL011C TY4B-PA0A0B7P3V8 1104 aa6.86□□□□□ -1.31
SCL1YGL011C SAC7P17121 654 aa6.86□□□□□ -1.31
SCL1YGL011C ERS1P17261 260 aa6.86□□□□□ -1.31
SCL1YGL011C SLS1P42900 643 aa6.86□□□□□ -1.31
SCL1YGL011C GDE1Q02979 1223 aa6.86□□□□□ -1.31
SCL1YGL011C ELG1Q12050 791 aa6.86□□□□□ -1.31
SCL1YGL011C TY4A-HQ6Q5P6 413 aa6.86□□□□□ -1.31
SCL1YGL011C YNR014WP53719 212 aa6.85□□□□□ -1.31
SCL1YGL011C RTT10Q08924 1013 aa6.85□□□□□ -1.31
SCL1YGL011C AI1P03875 834 aa6.84□□□□□ -1.31
SCL1YGL011C VMA4P22203 233 aaKnown RBP6.84□□□□□ -1.31
SCL1YGL011C TRK2P28584 889 aa6.84□□□□□ -1.31
SCL1YGL011C BOI2P39969 1040 aa6.84□□□□□ -1.31
SCL1YGL011C GCV1P48015 400 aa6.84□□□□□ -1.31
SCL1YGL011C ORC1P54784 914 aaPredicted RBP6.84□□□□□ -1.31
SCL1YGL011C SCP160P06105 1222 aaKnown RBP RIP-Chip data6.83□□□□□ -1.32not detected
SCL1YGL011C DED1P06634 604 aaKnown RBP6.83□□□□□ -1.32
SCL1YGL011C RRM3P38766 723 aa6.83□□□□□ -1.32
SCL1YGL011C HXT13P39924 564 aa6.83□□□□□ -1.32
SCL1YGL011C MTR4P47047 1073 aaKnown RBP6.83□□□□□ -1.32
SCL1YGL011C HXT17P53631 564 aa6.83□□□□□ -1.32
SCL1YGL011C HXT15P54854 567 aa6.83□□□□□ -1.32
SCL1YGL011C MEC3Q02574 474 aa6.83□□□□□ -1.32
SCL1YGL011C ROD1Q02805 837 aa6.83□□□□□ -1.32
SCL1YGL011C EEB1Q02891 456 aa6.83□□□□□ -1.32
SCL1YGL011C UTP5Q04177 643 aaKnown RBP6.83□□□□□ -1.32
SCL1YGL011C YMR074CQ04773 145 aa6.83□□□□□ -1.32
SCL1YGL011C TAF13P11747 167 aa6.82□□□□□ -1.32
SCL1YGL011C SIW14P53965 281 aa6.82□□□□□ -1.32
SCL1YGL011C ALG6Q12001 544 aaKnown RBP6.82□□□□□ -1.32
SCL1YGL011C SSF2Q12153 453 aaPredicted RBP6.82□□□□□ -1.32
SCL1YGL011C MAE1P36013 669 aaKnown RBP6.81□□□□□ -1.32
SCL1YGL011C REI1P38344 393 aaPredicted RBP6.81□□□□□ -1.32
SCL1YGL011C SPO74P45819 413 aa6.81□□□□□ -1.32
SCL1YGL011C FAR11P53917 953 aa6.81□□□□□ -1.32
SCL1YGL011C GAS5Q08193 484 aa6.81□□□□□ -1.32
SCL1YGL011C THI72Q08579 599 aa6.81□□□□□ -1.32
SCL1YGL011C PRI2P20457 528 aa6.8□□□□□ -1.32
SCL1YGL011C RAD27P26793 382 aa6.8□□□□□ -1.32
SCL1YGL011C ARL1P38116 183 aaKnown RBP6.8□□□□□ -1.32
SCL1YGL011C OCA5P38738 679 aa6.8□□□□□ -1.32
SCL1YGL011C YFL066CP43538 392 aa6.8□□□□□ -1.32
SCL1YGL011C KIP3P53086 805 aaKnown RBP6.8□□□□□ -1.32
SCL1YGL011C YGR053CP53234 283 aa6.8□□□□□ -1.32
SCL1YGL011C EST2Q06163 884 aa6.8□□□□□ -1.32
SCL1YGL011C NNF1P47149 201 aa6.79□□□□□ -1.32
SCL1YGL011C DSE4P53753 1117 aa6.79□□□□□ -1.32
SCL1YGL011C TDA6Q06466 467 aa6.79□□□□□ -1.32
SCL1YGL011C TMA46Q12000 345 aaKnown RBP6.79□□□□□ -1.32
SCL1YGL011C RER2P35196 286 aa6.78□□□□□ -1.32
SCL1YGL011C ADD66P36040 267 aa6.78□□□□□ -1.32
SCL1YGL011C YNR063WP53749 607 aa6.78□□□□□ -1.32
SCL1YGL011C NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.78□□□□□ -1.32not detected
SCL1YGL011C WRS1Q12109 432 aaKnown RBP6.78□□□□□ -1.32
SCL1YGL011C TY1A-NL1Q12391 440 aaKnown RBP6.78□□□□□ -1.32
SCL1YGL011C TRP2P00899 507 aaKnown RBP6.77□□□□□ -1.33
SCL1YGL011C MKK2P32491 506 aa6.77□□□□□ -1.33
SCL1YGL011C MDJ1P35191 511 aa6.77□□□□□ -1.33
SCL1YGL011C YKL069WP36088 180 aa6.77□□□□□ -1.33
SCL1YGL011C ENT3P47160 408 aa6.77□□□□□ -1.33
SCL1YGL011C NSG2P53898 299 aa6.77□□□□□ -1.33
SCL1YGL011C RAT1Q02792 1006 aaKnown RBP6.77□□□□□ -1.33
SCL1YGL011C OPI10Q08202 246 aa6.77□□□□□ -1.33
SCL1YGL011C FAL1Q12099 399 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms