RNA–Protein interactions for RNA: YER049W

TPA1, Transcript of Poly(rA)-binding protein, yeast

Gene TPA1, Length 1,935 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPA1	YER049W	MET32	Q12041	191 aa		4.87	□□□□□ -1.63
TPA1	YER049W	WHI5	Q12416	295 aa		4.87	□□□□□ -1.63
TPA1	YER049W	DPS1	P04802	557 aa	Known RBP	4.87	□□□□□ -1.63
TPA1	YER049W	DAT1	P13483	248 aa	Known RBP	4.87	□□□□□ -1.63
TPA1	YER049W	SPO1	P53541	631 aa		4.87	□□□□□ -1.63
TPA1	YER049W	LCD1	Q04377	747 aa		4.87	□□□□□ -1.63
TPA1	YER049W	LSO1	Q3E827	93 aa		4.87	□□□□□ -1.63
TPA1	YER049W	FRT1	Q99332	602 aa		4.87	□□□□□ -1.63
TPA1	YER049W	URB1	P34241	1764 aa	Known RBP	4.87	□□□□□ -1.63
TPA1	YER049W	FKS3	Q04952	1785 aa		4.87	□□□□□ -1.63
TPA1	YER049W	RRN6	P32786	894 aa		4.86	□□□□□ -1.63
TPA1	YER049W	TBS1	P38114	1094 aa		4.86	□□□□□ -1.63
TPA1	YER049W	RFC1	P38630	861 aa	Known RBP	4.86	□□□□□ -1.63
TPA1	YER049W	PPX1	P38698	397 aa		4.86	□□□□□ -1.63
TPA1	YER049W	HYR1	P40581	163 aa	Known RBP	4.86	□□□□□ -1.63
TPA1	YER049W	CIR1	P42940	261 aa		4.86	□□□□□ -1.63
TPA1	YER049W	NPA3	P47122	385 aa		4.86	□□□□□ -1.63
TPA1	YER049W	KRE33	P53914	1056 aa	Known RBP	4.86	□□□□□ -1.63
TPA1	YER049W	YPQ2	Q06328	317 aa		4.86	□□□□□ -1.63
TPA1	YER049W	GCD7	P32502	381 aa	Predicted RBP	4.85	□□□□□ -1.63
TPA1	YER049W	RKM3	P38222	552 aa		4.85	□□□□□ -1.63
TPA1	YER049W	YBR197C	P38306	217 aa		4.85	□□□□□ -1.63
TPA1	YER049W	NMD2	P38798	1089 aa	Known RBP	4.85	□□□□□ -1.63
TPA1	YER049W	CWH41	P53008	833 aa		4.85	□□□□□ -1.63
TPA1	YER049W	HST1	P53685	503 aa		4.85	□□□□□ -1.63
TPA1	YER049W	FOX2	Q02207	900 aa	Known RBP	4.85	□□□□□ -1.63
TPA1	YER049W	NUT2	Q06213	157 aa		4.85	□□□□□ -1.63
TPA1	YER049W	RRP15	Q06511	250 aa	Predicted RBP	4.85	□□□□□ -1.63
TPA1	YER049W	BDS1	Q08347	646 aa		4.85	□□□□□ -1.63
TPA1	YER049W	LYS2	P07702	1392 aa		4.85	□□□□□ -1.63
TPA1	YER049W	RAS1	P01119	309 aa		4.85	□□□□□ -1.63
TPA1	YER049W	HXT13	P39924	564 aa		4.85	□□□□□ -1.63
TPA1	YER049W	ACF4	P47129	309 aa		4.85	□□□□□ -1.63
TPA1	YER049W	RSC1	P53236	928 aa		4.85	□□□□□ -1.63
TPA1	YER049W	BMS1	Q08965	1183 aa	Known RBP	4.85	□□□□□ -1.63
TPA1	YER049W	AIM44	Q99299	758 aa		4.85	□□□□□ -1.63
TPA1	YER049W	RNR2	P09938	399 aa	Known RBP	4.84	□□□□□ -1.63
TPA1	YER049W	RPN12	P32496	274 aa		4.84	□□□□□ -1.63
TPA1	YER049W	ISC10	P32645	267 aa		4.84	□□□□□ -1.63
TPA1	YER049W	HXT5	P38695	592 aa		4.84	□□□□□ -1.63
TPA1	YER049W	UTP7	P40055	554 aa	Known RBP	4.84	□□□□□ -1.63
TPA1	YER049W	MAK10	Q02197	733 aa		4.84	□□□□□ -1.63
TPA1	YER049W	VPS20	Q04272	221 aa		4.84	□□□□□ -1.63
TPA1	YER049W	HRQ1	Q05549	1077 aa		4.84	□□□□□ -1.63
TPA1	YER049W	NOP58	Q12499	511 aa	Known RBP	4.84	□□□□□ -1.63
TPA1	YER049W	COQ4	O13525	335 aa		4.84	□□□□□ -1.64
TPA1	YER049W	RPB10	P22139	70 aa		4.84	□□□□□ -1.64
TPA1	YER049W	KTR2	P33550	425 aa		4.84	□□□□□ -1.64
TPA1	YER049W	HXT17	P53631	564 aa		4.84	□□□□□ -1.64
TPA1	YER049W	CTF4	Q01454	927 aa		4.84	□□□□□ -1.64
TPA1	YER049W	MCM1	P11746	286 aa		4.83	□□□□□ -1.64
TPA1	YER049W	RVS167	P39743	482 aa	Known RBP	4.83	□□□□□ -1.64
TPA1	YER049W	AIR1	P40507	360 aa	Known RBP	4.83	□□□□□ -1.64
TPA1	YER049W	SUM1	P46676	1062 aa		4.83	□□□□□ -1.64
TPA1	YER049W	SNU71	P53207	620 aa	Known RBP	4.83	□□□□□ -1.64
TPA1	YER049W	APC11	Q12157	165 aa		4.83	□□□□□ -1.64
TPA1	YER049W	RPP2B	P02400	110 aa	Known RBP	4.82	□□□□□ -1.64
TPA1	YER049W	ATE1	P16639	503 aa		4.82	□□□□□ -1.64
TPA1	YER049W	RAD24	P32641	659 aa		4.82	□□□□□ -1.64
TPA1	YER049W	PAM1	P37304	830 aa	Known RBP	4.82	□□□□□ -1.64
TPA1	YER049W	ALD2	P47771	506 aa		4.82	□□□□□ -1.64
TPA1	YER049W	AOS1	Q06624	347 aa		4.82	□□□□□ -1.64
TPA1	YER049W	BIK1	P11709	440 aa		4.82	□□□□□ -1.64
TPA1	YER049W	UGA3	P26370	528 aa		4.82	□□□□□ -1.64
TPA1	YER049W	YBR287W	P38355	427 aa		4.82	□□□□□ -1.64
TPA1	YER049W	RSM25	P40496	264 aa		4.82	□□□□□ -1.64
TPA1	YER049W	YOL057W	Q08225	711 aa		4.82	□□□□□ -1.64
TPA1	YER049W	QCR6	P00127	147 aa		4.81	□□□□□ -1.64
TPA1	YER049W	MCM2	P29469	868 aa		4.81	□□□□□ -1.64
TPA1	YER049W	HSP104	P31539	908 aa	Known RBP	4.81	□□□□□ -1.64
TPA1	YER049W	MET4	P32389	672 aa		4.81	□□□□□ -1.64
TPA1	YER049W	ASF1	P32447	279 aa		4.81	□□□□□ -1.64
TPA1	YER049W	MPE1	P35728	441 aa	Known RBP	4.81	□□□□□ -1.64
TPA1	YER049W	DLD3	P39976	496 aa	Known RBP	4.81	□□□□□ -1.64
TPA1	YER049W	YDR306C	Q06640	478 aa		4.81	□□□□□ -1.64
TPA1	YER049W	VAS1	P07806	1104 aa	Known RBP	4.8	□□□□□ -1.64
TPA1	YER049W	CDC4	P07834	779 aa		4.8	□□□□□ -1.64
TPA1	YER049W	BOI2	P39969	1040 aa		4.8	□□□□□ -1.64
TPA1	YER049W	KRI1	P42846	591 aa	Known RBP	4.8	□□□□□ -1.64
TPA1	YER049W	THI12	P42883	340 aa		4.8	□□□□□ -1.64
TPA1	YER049W	THI5	P43534	340 aa		4.8	□□□□□ -1.64
TPA1	YER049W	THI11	P47183	340 aa		4.8	□□□□□ -1.64
TPA1	YER049W	MSB3	P48566	633 aa	Predicted RBP	4.8	□□□□□ -1.64
TPA1	YER049W	MDG1	P53885	366 aa		4.8	□□□□□ -1.64
TPA1	YER049W	YNL165W	P53891	406 aa		4.8	□□□□□ -1.64
TPA1	YER049W	TRS120	Q04183	1289 aa		4.8	□□□□□ -1.64
TPA1	YER049W	NSE3	Q05541	303 aa		4.8	□□□□□ -1.64
TPA1	YER049W	THI13	Q07748	340 aa		4.8	□□□□□ -1.64
TPA1	YER049W	MRPL33	P20084	86 aa		4.8	□□□□□ -1.64
TPA1	YER049W	ELM1	P32801	640 aa		4.8	□□□□□ -1.64
TPA1	YER049W	SPR3	P41901	512 aa		4.8	□□□□□ -1.64
TPA1	YER049W	YGR122W	P53272	402 aa		4.8	□□□□□ -1.64
TPA1	YER049W	GPI13	Q07830	1017 aa		4.8	□□□□□ -1.64
TPA1	YER049W	MRP7	P12687	371 aa		4.79	□□□□□ -1.64
TPA1	YER049W	SCD5	P34758	872 aa		4.79	□□□□□ -1.64
TPA1	YER049W	MIC60	P36112	540 aa		4.79	□□□□□ -1.64
TPA1	YER049W	MNL2	Q12205	849 aa		4.79	□□□□□ -1.64
TPA1	YER049W	TAF13	P11747	167 aa		4.78	□□□□□ -1.64
TPA1	YER049W	AFT1	P22149	690 aa		4.78	□□□□□ -1.64
TPA1	YER049W	AAD14	P42884	376 aa		4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms