RNA–Protein interactions for RNA: YEL048C

TCA17, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TCA17, Length 459 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCA17YEL048C NCE103P53615 221 aa7.25□□□□□ -1.25
TCA17YEL048C PGM1P33401 570 aaKnown RBP7.24□□□□□ -1.25
TCA17YEL048C YKL077WP36081 392 aa7.24□□□□□ -1.25
TCA17YEL048C AKR1P39010 764 aa7.24□□□□□ -1.25
TCA17YEL048C DAL4Q04895 635 aa7.24□□□□□ -1.25
TCA17YEL048C NOP8Q08287 484 aaPredicted RBP7.24□□□□□ -1.25
TCA17YEL048C YOR223WQ12015 292 aa7.24□□□□□ -1.25
TCA17YEL048C PRP40P33203 583 aaKnown RBP7.23□□□□□ -1.25
TCA17YEL048C SAF1P38352 637 aa7.23□□□□□ -1.25
TCA17YEL048C NAM7P30771 971 aaKnown RBP7.22□□□□□ -1.25
TCA17YEL048C RPT1P33299 467 aaKnown RBP7.22□□□□□ -1.25
TCA17YEL048C KAE1P36132 386 aa7.22□□□□□ -1.25
TCA17YEL048C MEC3Q02574 474 aa7.22□□□□□ -1.25
TCA17YEL048C CHS2P14180 963 aa7.21□□□□□ -1.26
TCA17YEL048C REI1P38344 393 aaPredicted RBP7.21□□□□□ -1.26
TCA17YEL048C SQT1P35184 431 aa7.2□□□□□ -1.26
TCA17YEL048C RSM26P47141 266 aa7.2□□□□□ -1.26
TCA17YEL048C DOT1Q04089 582 aaKnown RBP7.2□□□□□ -1.26
TCA17YEL048C GIC2Q06648 383 aa7.2□□□□□ -1.26
TCA17YEL048C PUF3Q07807 879 aaKnown RBP RIP-Chip data7.2□□□□□ -1.26not detected
TCA17YEL048C HEM3P28789 327 aa7.19□□□□□ -1.26
TCA17YEL048C MGE1P38523 228 aa7.19□□□□□ -1.26
TCA17YEL048C POL32P47110 350 aa7.19□□□□□ -1.26
TCA17YEL048C YLR122CQ12312 125 aa7.19□□□□□ -1.26
TCA17YEL048C ARL1P38116 183 aaKnown RBP7.18□□□□□ -1.26
TCA17YEL048C PEX13P80667 386 aa7.18□□□□□ -1.26
TCA17YEL048C ULP1Q02724 621 aa7.18□□□□□ -1.26
TCA17YEL048C GPT2P36148 743 aa7.17□□□□□ -1.26
TCA17YEL048C AVO1Q08236 1176 aa7.17□□□□□ -1.26
TCA17YEL048C ALG6Q12001 544 aaKnown RBP7.17□□□□□ -1.26
TCA17YEL048C TY1A-LR4P0C2I8 440 aaKnown RBP7.16□□□□□ -1.26
TCA17YEL048C TY1A-DR6P0CX70 440 aa7.16□□□□□ -1.26
TCA17YEL048C TY1A-ER1P0CX71 440 aa7.16□□□□□ -1.26
TCA17YEL048C TY1A-LR2P0CX72 440 aa7.16□□□□□ -1.26
TCA17YEL048C TY1A-PLP0CX73 440 aa7.16□□□□□ -1.26
TCA17YEL048C TY1A-JR1P0CX74 440 aa7.16□□□□□ -1.26
TCA17YEL048C TY1A-LR3P0CX75 440 aa7.16□□□□□ -1.26
TCA17YEL048C TY1A-ML2P0CX76 440 aa7.16□□□□□ -1.26
TCA17YEL048C UGA4P32837 571 aa7.16□□□□□ -1.26
TCA17YEL048C ALO1P54783 526 aaKnown RBP7.16□□□□□ -1.26
TCA17YEL048C NOG1Q02892 647 aaKnown RBP7.16□□□□□ -1.26
TCA17YEL048C TY1A-GR1Q12085 440 aa7.16□□□□□ -1.26
TCA17YEL048C TY1A-PR3Q6Q5H1 440 aaKnown RBP7.16□□□□□ -1.26
TCA17YEL048C TY1A-OLQ92392 440 aaKnown RBP7.16□□□□□ -1.26
TCA17YEL048C MSH3P25336 1018 aa7.15□□□□□ -1.26
TCA17YEL048C ATG14P38270 344 aa7.15□□□□□ -1.26
TCA17YEL048C EXO5P38289 585 aa7.15□□□□□ -1.26
TCA17YEL048C MTR4P47047 1073 aaKnown RBP7.15□□□□□ -1.26
TCA17YEL048C YGR130CP53278 816 aa7.15□□□□□ -1.26
TCA17YEL048C MED7Q08278 222 aa7.15□□□□□ -1.26
TCA17YEL048C MAC1P35192 417 aa7.14□□□□□ -1.27
TCA17YEL048C ADI1Q03677 179 aa7.14□□□□□ -1.27
TCA17YEL048C MSB1P21339 1137 aaKnown RBP7.13□□□□□ -1.27
TCA17YEL048C ASF1P32447 279 aa7.13□□□□□ -1.27
TCA17YEL048C OMA1P36163 345 aa7.13□□□□□ -1.27
TCA17YEL048C FAA3P39002 694 aa7.13□□□□□ -1.27
TCA17YEL048C TOS4Q06266 489 aa7.13□□□□□ -1.27
TCA17YEL048C HXK1P04806 485 aaKnown RBP7.12□□□□□ -1.27
TCA17YEL048C PEX28P38848 579 aa7.12□□□□□ -1.27
TCA17YEL048C MMM1P41800 426 aa7.12□□□□□ -1.27
TCA17YEL048C SLS1P42900 643 aa7.12□□□□□ -1.27
TCA17YEL048C YPL109CQ02981 657 aa7.12□□□□□ -1.27
TCA17YEL048C TRP3P00937 484 aa7.11□□□□□ -1.27
TCA17YEL048C VMA4P22203 233 aaKnown RBP7.11□□□□□ -1.27
TCA17YEL048C SPO74P45819 413 aa7.11□□□□□ -1.27
TCA17YEL048C YGR045CP53229 120 aa7.11□□□□□ -1.27
TCA17YEL048C YGR122WP53272 402 aa7.11□□□□□ -1.27
TCA17YEL048C ELA1P53861 379 aaPredicted RBP7.11□□□□□ -1.27
TCA17YEL048C NSI1Q12457 570 aa7.11□□□□□ -1.27
TCA17YEL048C ATE1P16639 503 aa7.1□□□□□ -1.27
TCA17YEL048C NEM1P38757 446 aa7.1□□□□□ -1.27
TCA17YEL048C MSH4P40965 878 aaPredicted RBP7.1□□□□□ -1.27
TCA17YEL048C MRPS18P42847 217 aa7.1□□□□□ -1.27
TCA17YEL048C CIT3P43635 486 aa7.1□□□□□ -1.27
TCA17YEL048C MCD1Q12158 566 aa7.1□□□□□ -1.27
TCA17YEL048C GLT1Q12680 2145 aaKnown RBP7.09□□□□□ -1.27
TCA17YEL048C CYC7P00045 113 aa7.09□□□□□ -1.27
TCA17YEL048C RPS4AP0CX35 261 aaKnown RBP7.09□□□□□ -1.27
TCA17YEL048C RPS4BP0CX36 261 aaKnown RBP7.09□□□□□ -1.27
TCA17YEL048C NNK1P36003 928 aa7.09□□□□□ -1.27
TCA17YEL048C YKR073CP36153 106 aa7.09□□□□□ -1.27
TCA17YEL048C YOR059CQ08448 450 aaKnown RBP7.09□□□□□ -1.27
TCA17YEL048C PRE9P23638 258 aaKnown RBP7.08□□□□□ -1.28
TCA17YEL048C NFS1P25374 497 aa7.08□□□□□ -1.28
TCA17YEL048C WHI3P34761 661 aaKnown RBP7.08□□□□□ -1.28
TCA17YEL048C TOS1P38288 455 aa7.08□□□□□ -1.28
TCA17YEL048C YAR028WP39548 234 aa7.08□□□□□ -1.28
TCA17YEL048C RPS26AP39938 119 aaKnown RBP7.08□□□□□ -1.28
TCA17YEL048C RPS26BP39939 119 aaKnown RBP7.08□□□□□ -1.28
TCA17YEL048C UTP5Q04177 643 aaKnown RBP7.08□□□□□ -1.28
TCA17YEL048C LAP2Q10740 671 aa7.08□□□□□ -1.28
TCA17YEL048C SCP160P06105 1222 aaKnown RBP RIP-Chip data7.07□□□□□ -1.28not detected
TCA17YEL048C SMY2P32909 740 aaKnown RBP7.07□□□□□ -1.28
TCA17YEL048C HSE1P38753 452 aa7.07□□□□□ -1.28
TCA17YEL048C XKS1P42826 600 aa7.07□□□□□ -1.28
TCA17YEL048C YGL140CP53120 1219 aa7.07□□□□□ -1.28
TCA17YEL048C NRD1P53617 575 aaKnown RBP RIP-Chip data7.07□□□□□ -1.28not detected
TCA17YEL048C LIP5P32875 414 aa7.06□□□□□ -1.28
TCA17YEL048C YJR107WP47145 328 aa7.06□□□□□ -1.28
TCA17YEL048C RCM1P53972 490 aa7.06□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms