RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeast

Gene VAB2, Length 849 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAB2	YEL005C	CDC55	Q00362	526 aa		5.09	□□□□□ -1.59
VAB2	YEL005C	BSC2	Q05611	235 aa		5.09	□□□□□ -1.59
VAB2	YEL005C	WHI5	Q12416	295 aa		5.09	□□□□□ -1.59
VAB2	YEL005C	ERS1	P17261	260 aa		5.08	□□□□□ -1.6
VAB2	YEL005C	HSP78	P33416	811 aa		5.08	□□□□□ -1.6
VAB2	YEL005C	FLR1	P38124	548 aa		5.08	□□□□□ -1.6
VAB2	YEL005C	PSY2	P40164	858 aa		5.08	□□□□□ -1.6
VAB2	YEL005C	YIL165C	P40446	119 aa		5.08	□□□□□ -1.6
VAB2	YEL005C	HDA2	Q06629	674 aa		5.08	□□□□□ -1.6
VAB2	YEL005C	NOC3	Q07896	663 aa	Predicted RBP	5.08	□□□□□ -1.6
VAB2	YEL005C	OXR1	Q08952	273 aa		5.08	□□□□□ -1.6
VAB2	YEL005C	KTR2	P33550	425 aa		5.07	□□□□□ -1.6
VAB2	YEL005C	KIP3	P53086	805 aa	Known RBP	5.07	□□□□□ -1.6
VAB2	YEL005C	GUP1	P53154	560 aa		5.07	□□□□□ -1.6
VAB2	YEL005C	BIO5	P53744	561 aa	Known RBP	5.07	□□□□□ -1.6
VAB2	YEL005C	ELG1	Q12050	791 aa		5.07	□□□□□ -1.6
VAB2	YEL005C	TIF6	Q12522	245 aa	Known RBP	5.07	□□□□□ -1.6
VAB2	YEL005C	RGD2	P43556	714 aa		5.06	□□□□□ -1.6
VAB2	YEL005C	SOG2	Q08817	791 aa		5.06	□□□□□ -1.6
VAB2	YEL005C	MET4	P32389	672 aa		5.05	□□□□□ -1.6
VAB2	YEL005C	RPT1	P33299	467 aa	Known RBP	5.05	□□□□□ -1.6
VAB2	YEL005C	WHI3	P34761	661 aa	Known RBP	5.05	□□□□□ -1.6
VAB2	YEL005C	LEM3	P42838	414 aa		5.04	□□□□□ -1.6
VAB2	YEL005C	ALD3	P54114	506 aa		5.04	□□□□□ -1.6
VAB2	YEL005C	VPS35	P34110	944 aa		5.03	□□□□□ -1.6
VAB2	YEL005C	RSC4	Q02206	625 aa		5.03	□□□□□ -1.6
VAB2	YEL005C	EMG1	Q06287	252 aa	Known RBP	5.03	□□□□□ -1.6
VAB2	YEL005C	GPI13	Q07830	1017 aa		5.03	□□□□□ -1.6
VAB2	YEL005C	INP54	Q08227	384 aa	Known RBP	5.03	□□□□□ -1.6
VAB2	YEL005C	MNL2	Q12205	849 aa		5.03	□□□□□ -1.6
VAB2	YEL005C	MMM1	P41800	426 aa		5.02	□□□□□ -1.61
VAB2	YEL005C	SPO71	Q03868	1245 aa		5.02	□□□□□ -1.61
VAB2	YEL005C	PHO4	P07270	312 aa	Known RBP	5.01	□□□□□ -1.61
VAB2	YEL005C	ATE1	P16639	503 aa		5.01	□□□□□ -1.61
VAB2	YEL005C	DAK2	P43550	591 aa		5.01	□□□□□ -1.61
VAB2	YEL005C	OYE2	Q03558	400 aa	Known RBP	5.01	□□□□□ -1.61
VAB2	YEL005C	NAP1	P25293	417 aa	Known RBP	5	□□□□□ -1.61
VAB2	YEL005C	CIT3	P43635	486 aa		5	□□□□□ -1.61
VAB2	YEL005C	KAR2	P16474	682 aa	Known RBP	4.99	□□□□□ -1.61
VAB2	YEL005C	PRP6	P19735	899 aa	Predicted RBP	4.99	□□□□□ -1.61
VAB2	YEL005C	SEC8	P32855	1065 aa		4.99	□□□□□ -1.61
VAB2	YEL005C	YCS4	Q06156	1176 aa		4.99	□□□□□ -1.61
VAB2	YEL005C	NSI1	Q12457	570 aa		4.99	□□□□□ -1.61
VAB2	YEL005C	TAD3	Q9URQ3	322 aa		4.99	□□□□□ -1.61
VAB2	YEL005C	PYC2	P32327	1180 aa	Known RBP	4.98	□□□□□ -1.61
VAB2	YEL005C	PEP7	P32609	515 aa		4.98	□□□□□ -1.61
VAB2	YEL005C	MET10	P39692	1035 aa		4.98	□□□□□ -1.61
VAB2	YEL005C	NEO1	P40527	1151 aa		4.98	□□□□□ -1.61
VAB2	YEL005C	YJR107W	P47145	328 aa		4.98	□□□□□ -1.61
VAB2	YEL005C	DAL4	Q04895	635 aa		4.98	□□□□□ -1.61
VAB2	YEL005C	RRP15	Q06511	250 aa	Predicted RBP	4.98	□□□□□ -1.61
VAB2	YEL005C	FLP1	P03870	423 aa		4.97	□□□□□ -1.61
VAB2	YEL005C	FUS1	P11710	512 aa		4.97	□□□□□ -1.61
VAB2	YEL005C	RCM1	P53972	490 aa		4.97	□□□□□ -1.61
VAB2	YEL005C	MSH6	Q03834	1242 aa		4.97	□□□□□ -1.61
VAB2	YEL005C	SVF1	Q05515	481 aa		4.97	□□□□□ -1.61
VAB2	YEL005C	SQT1	P35184	431 aa		4.96	□□□□□ -1.62
VAB2	YEL005C	GPT2	P36148	743 aa		4.96	□□□□□ -1.62
VAB2	YEL005C	OYE3	P41816	400 aa	Predicted RBP	4.96	□□□□□ -1.62
VAB2	YEL005C	MON1	P53129	644 aa		4.96	□□□□□ -1.62
VAB2	YEL005C	PMT7	Q06644	662 aa		4.96	□□□□□ -1.62
VAB2	YEL005C	MCM5	P29496	775 aa	Known RBP	4.95	□□□□□ -1.62
VAB2	YEL005C	PRP40	P33203	583 aa	Known RBP	4.95	□□□□□ -1.62
VAB2	YEL005C	RVS167	P39743	482 aa	Known RBP	4.95	□□□□□ -1.62
VAB2	YEL005C	RPS26A	P39938	119 aa	Known RBP	4.95	□□□□□ -1.62
VAB2	YEL005C	RPS26B	P39939	119 aa	Known RBP	4.95	□□□□□ -1.62
VAB2	YEL005C	YGR122W	P53272	402 aa		4.95	□□□□□ -1.62
VAB2	YEL005C	HAS1	Q03532	505 aa	Known RBP	4.95	□□□□□ -1.62
VAB2	YEL005C	ESF1	Q06344	628 aa	Known RBP	4.95	□□□□□ -1.62
VAB2	YEL005C	PRE9	P23638	258 aa	Known RBP	4.94	□□□□□ -1.62
VAB2	YEL005C	AIM3	P38266	947 aa	Known RBP	4.94	□□□□□ -1.62
VAB2	YEL005C	SHU2	P38957	223 aa		4.94	□□□□□ -1.62
VAB2	YEL005C	RSM26	P47141	266 aa		4.94	□□□□□ -1.62
VAB2	YEL005C	NUT1	P53114	1132 aa		4.94	□□□□□ -1.62
VAB2	YEL005C	MCM2	P29469	868 aa		4.93	□□□□□ -1.62
VAB2	YEL005C	FYV10	P40492	516 aa		4.93	□□□□□ -1.62
VAB2	YEL005C	FET4	P40988	552 aa		4.93	□□□□□ -1.62
VAB2	YEL005C	MRPS18	P42847	217 aa		4.93	□□□□□ -1.62
VAB2	YEL005C	YJR124C	P47159	448 aa		4.93	□□□□□ -1.62
VAB2	YEL005C	CTR9	P89105	1077 aa		4.93	□□□□□ -1.62
VAB2	YEL005C	RMD1	Q03441	430 aa		4.93	□□□□□ -1.62
VAB2	YEL005C	SPR28	Q04921	423 aa		4.93	□□□□□ -1.62
VAB2	YEL005C	JIP5	Q06214	492 aa	Predicted RBP	4.93	□□□□□ -1.62
VAB2	YEL005C	MCD1	Q12158	566 aa		4.93	□□□□□ -1.62
VAB2	YEL005C	PAM1	P37304	830 aa	Known RBP	4.92	□□□□□ -1.62
VAB2	YEL005C	YOR223W	Q12015	292 aa		4.92	□□□□□ -1.62
VAB2	YEL005C	PET112	P33893	541 aa		4.91	□□□□□ -1.62
VAB2	YEL005C	YPT53	P36019	220 aa		4.91	□□□□□ -1.62
VAB2	YEL005C	ATG14	P38270	344 aa		4.91	□□□□□ -1.62
VAB2	YEL005C	FAA3	P39002	694 aa		4.91	□□□□□ -1.62
VAB2	YEL005C	MAD1	P40957	749 aa		4.91	□□□□□ -1.62
VAB2	YEL005C	COB	P00163	385 aa		4.9	□□□□□ -1.63
VAB2	YEL005C	RAD2	P07276	1031 aa		4.9	□□□□□ -1.63
VAB2	YEL005C	CYC8	P14922	966 aa		4.9	□□□□□ -1.63
VAB2	YEL005C	CLN2	P20438	545 aa		4.9	□□□□□ -1.63
VAB2	YEL005C	NPR1	P22211	790 aa		4.9	□□□□□ -1.63
VAB2	YEL005C	ADP1	P25371	1049 aa		4.9	□□□□□ -1.63
VAB2	YEL005C	FAR11	P53917	953 aa		4.9	□□□□□ -1.63
VAB2	YEL005C	YAF9	P53930	226 aa		4.9	□□□□□ -1.63
VAB2	YEL005C	ULP1	Q02724	621 aa		4.9	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 226.1 ms