RNA–Protein interactions for RNA: YDR510W

SMT3, Transcript of Ubiquitin-like protein of the SUMO family, yeast

Gene SMT3, Length 306 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMT3	YDR510W	SUM1	P46676	1062 aa		4.01	□□□□□ -1.77
SMT3	YDR510W	PFD1	P46988	109 aa		4.01	□□□□□ -1.77
SMT3	YDR510W	TY4A-J	P47023	414 aa		4.01	□□□□□ -1.77
SMT3	YDR510W	YJR120W	P47157	116 aa		4.01	□□□□□ -1.77
SMT3	YDR510W	NUT1	P53114	1132 aa		4.01	□□□□□ -1.77
SMT3	YDR510W	UGO1	Q03327	502 aa		4.01	□□□□□ -1.77
SMT3	YDR510W	TMA7	Q3E764	64 aa	Known RBP	4.01	□□□□□ -1.77
SMT3	YDR510W	Q0182	Q9ZZW1	134 aa		4.01	□□□□□ -1.77
SMT3	YDR510W	SQT1	P35184	431 aa		4	□□□□□ -1.77
SMT3	YDR510W	VBA5	P36172	582 aa		4	□□□□□ -1.77
SMT3	YDR510W	AIM21	P40563	679 aa		4	□□□□□ -1.77
SMT3	YDR510W	DAS1	P47005	663 aa		4	□□□□□ -1.77
SMT3	YDR510W	RSM26	P47141	266 aa		4	□□□□□ -1.77
SMT3	YDR510W	PMT3	P47190	753 aa		4	□□□□□ -1.77
SMT3	YDR510W	KIP3	P53086	805 aa	Known RBP	4	□□□□□ -1.77
SMT3	YDR510W	YNL165W	P53891	406 aa		4	□□□□□ -1.77
SMT3	YDR510W	ALO1	P54783	526 aa	Known RBP	4	□□□□□ -1.77
SMT3	YDR510W	CTR9	P89105	1077 aa		4	□□□□□ -1.77
SMT3	YDR510W	SVL3	Q03088	825 aa	Known RBP	4	□□□□□ -1.77
SMT3	YDR510W	ATG16	Q03818	150 aa		4	□□□□□ -1.77
SMT3	YDR510W	MSH6	Q03834	1242 aa		4	□□□□□ -1.77
SMT3	YDR510W	DFG5	Q05031	458 aa		4	□□□□□ -1.77
SMT3	YDR510W	YDR344C	Q05510	147 aa		4	□□□□□ -1.77
SMT3	YDR510W	NYV1	Q12255	253 aa		4	□□□□□ -1.77
SMT3	YDR510W	SRF1	Q12516	437 aa		4	□□□□□ -1.77
SMT3	YDR510W	DPS1	P04802	557 aa	Known RBP	3.99	□□□□□ -1.77
SMT3	YDR510W	MLF3	P32047	452 aa		3.99	□□□□□ -1.77
SMT3	YDR510W	PEX6	P33760	1030 aa		3.99	□□□□□ -1.77
SMT3	YDR510W	MPE1	P35728	441 aa	Known RBP	3.99	□□□□□ -1.77
SMT3	YDR510W	BET3	P36149	193 aa		3.99	□□□□□ -1.77
SMT3	YDR510W	ISW1	P38144	1129 aa		3.99	□□□□□ -1.77
SMT3	YDR510W	ECM2	P38241	364 aa	Known RBP	3.99	□□□□□ -1.77
SMT3	YDR510W	PBY1	P38254	753 aa		3.99	□□□□□ -1.77
SMT3	YDR510W	YBR287W	P38355	427 aa		3.99	□□□□□ -1.77
SMT3	YDR510W	BSD2	P38356	321 aa		3.99	□□□□□ -1.77
SMT3	YDR510W	GEM1	P39722	662 aa		3.99	□□□□□ -1.77
SMT3	YDR510W	RVS167	P39743	482 aa	Known RBP	3.99	□□□□□ -1.77
SMT3	YDR510W	PTC2	P39966	464 aa	Known RBP	3.99	□□□□□ -1.77
SMT3	YDR510W	HSV2	P50079	448 aa	Predicted RBP	3.99	□□□□□ -1.77
SMT3	YDR510W	UTP8	P53276	713 aa	Known RBP	3.99	□□□□□ -1.77
SMT3	YDR510W	SYH1	Q02875	849 aa	Known RBP	3.99	□□□□□ -1.77
SMT3	YDR510W	SPP1	Q03012	353 aa		3.99	□□□□□ -1.77
SMT3	YDR510W	SND1	Q04007	877 aa		3.99	□□□□□ -1.77
SMT3	YDR510W	COG4	Q06096	861 aa		3.99	□□□□□ -1.77
SMT3	YDR510W	PUS5	Q06244	254 aa		3.99	□□□□□ -1.77
SMT3	YDR510W	ATP4	P05626	244 aa		3.98	□□□□□ -1.77
SMT3	YDR510W	SEC23	P15303	768 aa	Known RBP	3.98	□□□□□ -1.77
SMT3	YDR510W	YEF3	P16521	1044 aa	Known RBP	3.98	□□□□□ -1.77
SMT3	YDR510W	PRP9	P19736	530 aa	Known RBP	3.98	□□□□□ -1.77
SMT3	YDR510W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	3.98	□□□□□ -1.77	not detected
SMT3	YDR510W	HIR1	P32479	840 aa		3.98	□□□□□ -1.77
SMT3	YDR510W	LYP1	P32487	611 aa		3.98	□□□□□ -1.77
SMT3	YDR510W	DUR3	P33413	735 aa		3.98	□□□□□ -1.77
SMT3	YDR510W	YBL086C	P38177	466 aa		3.98	□□□□□ -1.77
SMT3	YDR510W	GIP1	P38229	639 aa		3.98	□□□□□ -1.77
SMT3	YDR510W	DLD3	P39976	496 aa	Known RBP	3.98	□□□□□ -1.77
SMT3	YDR510W	VPS27	P40343	622 aa	Known RBP	3.98	□□□□□ -1.77
SMT3	YDR510W	ALR2	P43553	858 aa		3.98	□□□□□ -1.77
SMT3	YDR510W	MAL11	P53048	616 aa		3.98	□□□□□ -1.77
SMT3	YDR510W	YGR021W	P53212	290 aa		3.98	□□□□□ -1.77
SMT3	YDR510W	UME1	Q03010	460 aa		3.98	□□□□□ -1.77
SMT3	YDR510W	YLR225C	Q05948	407 aa	Known RBP	3.98	□□□□□ -1.77
SMT3	YDR510W	HDA2	Q06629	674 aa		3.98	□□□□□ -1.77
SMT3	YDR510W	YDL124W	Q07551	312 aa	Known RBP	3.98	□□□□□ -1.77
SMT3	YDR510W	YOR296W	Q08748	1289 aa		3.98	□□□□□ -1.77
SMT3	YDR510W	REC8	Q12188	680 aa		3.98	□□□□□ -1.77
SMT3	YDR510W	LDB19	Q12502	818 aa		3.98	□□□□□ -1.77
SMT3	YDR510W	PIF1	P07271	859 aa		3.97	□□□□□ -1.77
SMT3	YDR510W	TAF13	P11747	167 aa		3.97	□□□□□ -1.77
SMT3	YDR510W	KAP122	P32767	1081 aa		3.97	□□□□□ -1.77
SMT3	YDR510W	RER2	P35196	286 aa		3.97	□□□□□ -1.77
SMT3	YDR510W	SPT23	P35210	1082 aa		3.97	□□□□□ -1.77
SMT3	YDR510W	PEX28	P38848	579 aa		3.97	□□□□□ -1.77
SMT3	YDR510W	AIM46	P38885	310 aa		3.97	□□□□□ -1.77
SMT3	YDR510W	GDH3	P39708	457 aa		3.97	□□□□□ -1.77
SMT3	YDR510W	NOC2	P39744	710 aa	Known RBP	3.97	□□□□□ -1.77
SMT3	YDR510W	HXT13	P39924	564 aa		3.97	□□□□□ -1.77
SMT3	YDR510W	IES5	P40060	125 aa		3.97	□□□□□ -1.77
SMT3	YDR510W	SAP155	P43612	1002 aa		3.97	□□□□□ -1.77
SMT3	YDR510W	GPG1	P53130	126 aa		3.97	□□□□□ -1.77
SMT3	YDR510W	HXT17	P53631	564 aa		3.97	□□□□□ -1.77
SMT3	YDR510W	YNL193W	P53870	558 aa		3.97	□□□□□ -1.77
SMT3	YDR510W	COG6	P53959	839 aa		3.97	□□□□□ -1.77
SMT3	YDR510W	SIW14	P53965	281 aa		3.97	□□□□□ -1.77
SMT3	YDR510W	HXT15	P54854	567 aa		3.97	□□□□□ -1.77
SMT3	YDR510W	FRK1	Q03002	865 aa	Predicted RBP	3.97	□□□□□ -1.77
SMT3	YDR510W	GIR2	Q03768	265 aa	Predicted RBP	3.97	□□□□□ -1.77
SMT3	YDR510W	PMT7	Q06644	662 aa		3.97	□□□□□ -1.77
SMT3	YDR510W	GIC2	Q06648	383 aa		3.97	□□□□□ -1.77
SMT3	YDR510W	THI73	Q07904	523 aa		3.97	□□□□□ -1.77
SMT3	YDR510W	MEF1	P25039	761 aa		3.96	□□□□□ -1.78
SMT3	YDR510W	PYC2	P32327	1180 aa	Known RBP	3.96	□□□□□ -1.78
SMT3	YDR510W	MRT4	P33201	236 aa	Known RBP	3.96	□□□□□ -1.78
SMT3	YDR510W	MTC2	P34246	357 aa		3.96	□□□□□ -1.78
SMT3	YDR510W	YBR071W	P38243	211 aa		3.96	□□□□□ -1.78
SMT3	YDR510W	PEA2	P40091	420 aa		3.96	□□□□□ -1.78
SMT3	YDR510W	ALA1	P40825	983 aa	Known RBP	3.96	□□□□□ -1.78
SMT3	YDR510W	PEX14	P53112	341 aa		3.96	□□□□□ -1.78
SMT3	YDR510W	YGL140C	P53120	1219 aa		3.96	□□□□□ -1.78
SMT3	YDR510W	MTC5	Q03897	1148 aa		3.96	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 128.2 ms