RNA–Protein interactions for RNA: YDR457W

TOM1, Transcript of E3 ubiquitin ligase of the hect-domain class, yeastyeast

Gene TOM1, Length 9,807 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOM1YDR457W SAM37P50110 327 aa2.98□□□□□ -1.93
TOM1YDR457W LSB1P53281 241 aa2.98□□□□□ -1.93
TOM1YDR457W FRT2P39734 528 aa2.98□□□□□ -1.93
TOM1YDR457W RPN3P40016 523 aaKnown RBP2.98□□□□□ -1.93
TOM1YDR457W CCT7P42943 550 aaKnown RBP2.98□□□□□ -1.93
TOM1YDR457W MTC5Q03897 1148 aa2.98□□□□□ -1.93
TOM1YDR457W NKP2Q06162 153 aa2.98□□□□□ -1.93
TOM1YDR457W ALE1Q08548 619 aa2.98□□□□□ -1.93
TOM1YDR457W NOT3P06102 836 aaKnown RBP2.98□□□□□ -1.93
TOM1YDR457W VPS33P20795 691 aa2.98□□□□□ -1.93
TOM1YDR457W NDI1P32340 513 aa2.98□□□□□ -1.93
TOM1YDR457W APE4P38821 490 aa2.98□□□□□ -1.93
TOM1YDR457W RVS167P39743 482 aaKnown RBP2.98□□□□□ -1.93
TOM1YDR457W SCD6P45978 349 aaKnown RBP RIP-Chip data2.98□□□□□ -1.93 RIP-Chip
TOM1YDR457W CEP3P40969 608 aa2.97□□□□□ -1.93
TOM1YDR457W PMT3P47190 753 aa2.97□□□□□ -1.93
TOM1YDR457W INP52P50942 1183 aa2.97□□□□□ -1.93
TOM1YDR457W FAP1P53971 965 aa2.97□□□□□ -1.93
TOM1YDR457W ADE12P80210 433 aaKnown RBP2.97□□□□□ -1.93
TOM1YDR457W ACL4Q03771 387 aa2.97□□□□□ -1.93
TOM1YDR457W PYC1P11154 1178 aaKnown RBP2.97□□□□□ -1.93
TOM1YDR457W DLD1P32891 587 aa2.97□□□□□ -1.93
TOM1YDR457W VID28P40547 921 aa2.97□□□□□ -1.93
TOM1YDR457W SAP155P43612 1002 aa2.97□□□□□ -1.93
TOM1YDR457W OCA1P50946 238 aaPredicted RBP2.97□□□□□ -1.93
TOM1YDR457W ATG23Q06671 453 aa2.97□□□□□ -1.93
TOM1YDR457W TUF1P02992 437 aaKnown RBP2.97□□□□□ -1.93
TOM1YDR457W CNS1P33313 385 aa2.97□□□□□ -1.93
TOM1YDR457W YJL206CP39529 758 aa2.97□□□□□ -1.93
TOM1YDR457W SWM2P40342 146 aa2.97□□□□□ -1.93
TOM1YDR457W MAM33P40513 266 aa2.97□□□□□ -1.93
TOM1YDR457W YFL034WP43564 1073 aa2.97□□□□□ -1.93
TOM1YDR457W YCS4Q06156 1176 aa2.97□□□□□ -1.93
TOM1YDR457W MSC6Q08818 692 aaKnown RBP2.97□□□□□ -1.93
TOM1YDR457W PRX1P34227 261 aaKnown RBP2.97□□□□□ -1.93
TOM1YDR457W MRPL10P36520 322 aa2.97□□□□□ -1.93
TOM1YDR457W UPF3P48412 387 aaKnown RBP2.97□□□□□ -1.93
TOM1YDR457W BDF2Q07442 638 aa2.97□□□□□ -1.93
TOM1YDR457W PRM4Q12498 284 aa2.97□□□□□ -1.93
TOM1YDR457W SPT6P23615 1451 aaKnown RBP2.97□□□□□ -1.93
TOM1YDR457W CIT1P00890 479 aa2.97□□□□□ -1.93
TOM1YDR457W DCD1P06773 312 aa2.97□□□□□ -1.93
TOM1YDR457W MRP7P12687 371 aa2.97□□□□□ -1.93
TOM1YDR457W MSH2P25847 964 aa2.97□□□□□ -1.93
TOM1YDR457W SPC97P38863 823 aa2.97□□□□□ -1.93
TOM1YDR457W MSH6Q03834 1242 aa2.97□□□□□ -1.93
TOM1YDR457W NHA1Q99271 985 aa2.97□□□□□ -1.93
TOM1YDR457W TFC4P33339 1025 aa2.97□□□□□ -1.93
TOM1YDR457W RPS12P48589 143 aaKnown RBP2.97□□□□□ -1.93
TOM1YDR457W YGL242CP53066 181 aa2.97□□□□□ -1.93
TOM1YDR457W UTP8P53276 713 aaKnown RBP2.97□□□□□ -1.93
TOM1YDR457W ZPR1P53303 486 aaKnown RBP2.97□□□□□ -1.93
TOM1YDR457W HST1P53685 503 aa2.97□□□□□ -1.93
TOM1YDR457W RSC3Q06639 885 aa2.97□□□□□ -1.93
TOM1YDR457W COS7Q07788 383 aa2.97□□□□□ -1.93
TOM1YDR457W CFT1Q06632 1357 aaKnown RBP2.97□□□□□ -1.93
TOM1YDR457W VMA2P16140 517 aaKnown RBP2.97□□□□□ -1.93
TOM1YDR457W SER1P33330 395 aaKnown RBP2.97□□□□□ -1.93
TOM1YDR457W YGR111WP53265 400 aa2.97□□□□□ -1.93
TOM1YDR457W COP1P53622 1201 aaKnown RBP2.97□□□□□ -1.93
TOM1YDR457W GDE1Q02979 1223 aa2.97□□□□□ -1.93
TOM1YDR457W SEC10Q06245 871 aa2.97□□□□□ -1.93
TOM1YDR457W ATG20Q07528 640 aa2.97□□□□□ -1.93
TOM1YDR457W TSR3Q12094 313 aaKnown RBP2.97□□□□□ -1.93
TOM1YDR457W MSB4Q12317 492 aa2.97□□□□□ -1.93
TOM1YDR457W SSD1P24276 1250 aaKnown RBP RIP-Chip data2.97□□□□□ -1.93not detected
TOM1YDR457W RPN12P32496 274 aa2.97□□□□□ -1.93
TOM1YDR457W XRS2P33301 854 aa2.97□□□□□ -1.93
TOM1YDR457W YAP5P40574 245 aa2.97□□□□□ -1.93
TOM1YDR457W HGH1P48362 394 aaKnown RBP2.97□□□□□ -1.93
TOM1YDR457W NUT1P53114 1132 aa2.97□□□□□ -1.93
TOM1YDR457W MCM16Q12262 181 aa2.97□□□□□ -1.93
TOM1YDR457W FRT1Q99332 602 aa2.97□□□□□ -1.93
TOM1YDR457W DBP3P20447 523 aaKnown RBP2.96□□□□□ -1.93
TOM1YDR457W VPS34P22543 875 aa2.96□□□□□ -1.93
TOM1YDR457W ATP3P38077 311 aaKnown RBP2.96□□□□□ -1.93
TOM1YDR457W ESL1P40456 1118 aa2.96□□□□□ -1.93
TOM1YDR457W DPB4Q04603 196 aaKnown RBP2.96□□□□□ -1.93
TOM1YDR457W OSW2Q12202 724 aa2.96□□□□□ -1.93
TOM1YDR457W DBP10Q12389 995 aaKnown RBP2.96□□□□□ -1.93
TOM1YDR457W SSM4P40318 1319 aa2.96□□□□□ -1.94
TOM1YDR457W RGA1P39083 1007 aa2.96□□□□□ -1.94
TOM1YDR457W ADE16P54113 591 aaKnown RBP2.96□□□□□ -1.94
TOM1YDR457W MSS116P15424 664 aaKnown RBP2.96□□□□□ -1.94
TOM1YDR457W YKL063CP35725 167 aa2.96□□□□□ -1.94
TOM1YDR457W MUM2P38236 366 aa2.96□□□□□ -1.94
TOM1YDR457W VPS45P38932 577 aa2.96□□□□□ -1.94
TOM1YDR457W CLU1Q03690 1277 aaKnown RBP2.96□□□□□ -1.94
TOM1YDR457W HPT1Q04178 221 aaKnown RBP2.96□□□□□ -1.94
TOM1YDR457W RRP12Q12754 1228 aaKnown RBP2.96□□□□□ -1.94
TOM1YDR457W TIM54P47045 478 aa2.96□□□□□ -1.94
TOM1YDR457W LOH1P47055 219 aa2.96□□□□□ -1.94
TOM1YDR457W RFX1P48743 811 aa2.96□□□□□ -1.94
TOM1YDR457W ERP6P53198 216 aa2.96□□□□□ -1.94
TOM1YDR457W RPN9Q04062 393 aaKnown RBP2.96□□□□□ -1.94
TOM1YDR457W ARP7Q12406 477 aa2.96□□□□□ -1.94
TOM1YDR457W PRE10P21242 288 aaKnown RBP RIP-Chip data2.96□□□□□ -1.94 RIP-Chip
TOM1YDR457W EMP65P40085 556 aa2.96□□□□□ -1.94
TOM1YDR457W MAL11P53048 616 aa2.96□□□□□ -1.94
TOM1YDR457W CUL3P53202 744 aa2.96□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 196.4 ms