RNA–Protein interactions for RNA: YDL043C

PRP11, Transcript of Subunit of the SF3a splicing factor complex, yeastyeast

Gene PRP11, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP11YDL043C YKL069WP36088 180 aa4.99□□□□□ -1.61
PRP11YDL043C RIM11P38615 370 aa4.99□□□□□ -1.61
PRP11YDL043C APM2P38700 605 aa4.99□□□□□ -1.61
PRP11YDL043C XKS1P42826 600 aa4.99□□□□□ -1.61
PRP11YDL043C YJR098CP47139 656 aa4.99□□□□□ -1.61
PRP11YDL043C TYW3P53177 273 aa4.99□□□□□ -1.61
PRP11YDL043C YNR040WP53736 256 aa4.99□□□□□ -1.61
PRP11YDL043C EEB1Q02891 456 aa4.99□□□□□ -1.61
PRP11YDL043C PPM2Q08282 695 aa4.99□□□□□ -1.61
PRP11YDL043C FAL1Q12099 399 aaKnown RBP4.99□□□□□ -1.61
PRP11YDL043C BAS1P22035 811 aa4.98□□□□□ -1.61
PRP11YDL043C RAD27P26793 382 aa4.98□□□□□ -1.61
PRP11YDL043C NUP82P40368 713 aa4.98□□□□□ -1.61
PRP11YDL043C KRI1P42846 591 aaKnown RBP4.98□□□□□ -1.61
PRP11YDL043C TIM54P47045 478 aa4.98□□□□□ -1.61
PRP11YDL043C CCT8P47079 568 aaKnown RBP4.98□□□□□ -1.61
PRP11YDL043C RSM26P47141 266 aa4.98□□□□□ -1.61
PRP11YDL043C GNP1P48813 663 aa4.98□□□□□ -1.61
PRP11YDL043C LYS5P50113 272 aa4.98□□□□□ -1.61
PRP11YDL043C NSG2P53898 299 aa4.98□□□□□ -1.61
PRP11YDL043C KRE33P53914 1056 aaKnown RBP4.98□□□□□ -1.61
PRP11YDL043C POB3Q04636 552 aaKnown RBP4.98□□□□□ -1.61
PRP11YDL043C MRL1Q06815 381 aa4.98□□□□□ -1.61
PRP11YDL043C TCB1Q12466 1186 aa4.98□□□□□ -1.61
PRP11YDL043C TAF13P11747 167 aa4.97□□□□□ -1.61
PRP11YDL043C SEC23P15303 768 aaKnown RBP4.97□□□□□ -1.61
PRP11YDL043C PRP5P21372 849 aaPredicted RBP4.97□□□□□ -1.61
PRP11YDL043C OSH7P38755 437 aa4.97□□□□□ -1.61
PRP11YDL043C PEX28P38848 579 aa4.97□□□□□ -1.61
PRP11YDL043C UBP15P50101 1230 aa4.97□□□□□ -1.61
PRP11YDL043C NOG1Q02892 647 aaKnown RBP4.97□□□□□ -1.61
PRP11YDL043C CMR1Q12510 522 aaKnown RBP4.97□□□□□ -1.61
PRP11YDL043C TOP1P04786 769 aa4.96□□□□□ -1.62
PRP11YDL043C MET6P05694 767 aaKnown RBP4.96□□□□□ -1.62
PRP11YDL043C NPR1P22211 790 aa4.96□□□□□ -1.62
PRP11YDL043C NCL1P38205 684 aaKnown RBP4.96□□□□□ -1.62
PRP11YDL043C YHR020WP38708 688 aaKnown RBP4.96□□□□□ -1.62
PRP11YDL043C CHZ1P40019 153 aaPredicted RBP4.96□□□□□ -1.62
PRP11YDL043C YER156CP40093 338 aaKnown RBP4.96□□□□□ -1.62
PRP11YDL043C JJJ3P47138 172 aa4.96□□□□□ -1.62
PRP11YDL043C YGL140CP53120 1219 aa4.96□□□□□ -1.62
PRP11YDL043C AGP1P25376 633 aa4.95□□□□□ -1.62
PRP11YDL043C MNN1P39106 762 aa4.95□□□□□ -1.62
PRP11YDL043C PPT1P53043 513 aa4.95□□□□□ -1.62
PRP11YDL043C RSC2Q06488 889 aa4.95□□□□□ -1.62
PRP11YDL043C FLC1Q08967 793 aa4.95□□□□□ -1.62
PRP11YDL043C RPP1AP05318 106 aaPredicted RBP4.94□□□□□ -1.62
PRP11YDL043C PHO8P11491 566 aa4.94□□□□□ -1.62
PRP11YDL043C FUS1P11710 512 aa4.94□□□□□ -1.62
PRP11YDL043C LYP1P32487 611 aa4.94□□□□□ -1.62
PRP11YDL043C TIM23P32897 222 aa4.94□□□□□ -1.62
PRP11YDL043C YBR184WP38299 523 aa4.94□□□□□ -1.62
PRP11YDL043C SHU2P38957 223 aa4.94□□□□□ -1.62
PRP11YDL043C RSP5P39940 809 aaKnown RBP4.94□□□□□ -1.62
PRP11YDL043C ENT3P47160 408 aa4.94□□□□□ -1.62
PRP11YDL043C PEX13P80667 386 aa4.94□□□□□ -1.62
PRP11YDL043C NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.94□□□□□ -1.62not detected
PRP11YDL043C HDA2Q06629 674 aa4.94□□□□□ -1.62
PRP11YDL043C SPO75Q07798 868 aa4.94□□□□□ -1.62
PRP11YDL043C YLR125WQ12138 136 aa4.94□□□□□ -1.62
PRP11YDL043C GLO4Q12320 285 aa4.94□□□□□ -1.62
PRP11YDL043C HEM13P11353 328 aaKnown RBP4.93□□□□□ -1.62
PRP11YDL043C TSR4P25040 408 aa4.93□□□□□ -1.62
PRP11YDL043C MSH3P25336 1018 aa4.93□□□□□ -1.62
PRP11YDL043C STE5P32917 917 aa4.93□□□□□ -1.62
PRP11YDL043C MRP8P35719 219 aa4.93□□□□□ -1.62
PRP11YDL043C MRPL16P38064 232 aa4.93□□□□□ -1.62
PRP11YDL043C HXT13P39924 564 aa4.93□□□□□ -1.62
PRP11YDL043C YFL066CP43538 392 aa4.93□□□□□ -1.62
PRP11YDL043C HXT17P53631 564 aa4.93□□□□□ -1.62
PRP11YDL043C SIW14P53965 281 aa4.93□□□□□ -1.62
PRP11YDL043C HXT15P54854 567 aa4.93□□□□□ -1.62
PRP11YDL043C SHE9Q04172 456 aa4.93□□□□□ -1.62
PRP11YDL043C SPO20Q04359 397 aa4.93□□□□□ -1.62
PRP11YDL043C UTP14Q04500 899 aaKnown RBP4.93□□□□□ -1.62
PRP11YDL043C THI72Q08579 599 aa4.93□□□□□ -1.62
PRP11YDL043C OSH2Q12451 1283 aa4.93□□□□□ -1.62
PRP11YDL043C CDC19P00549 500 aaKnown RBP4.92□□□□□ -1.62
PRP11YDL043C TRP2P00899 507 aaKnown RBP4.92□□□□□ -1.62
PRP11YDL043C IDI1P15496 288 aa4.92□□□□□ -1.62
PRP11YDL043C SBA1P28707 216 aaKnown RBP4.92□□□□□ -1.62
PRP11YDL043C RER2P35196 286 aa4.92□□□□□ -1.62
PRP11YDL043C RDH54P38086 958 aa4.92□□□□□ -1.62
PRP11YDL043C YGL081WP53156 320 aa4.92□□□□□ -1.62
PRP11YDL043C YGR125WP53273 1036 aa4.92□□□□□ -1.62
PRP11YDL043C FMP25Q08023 583 aa4.92□□□□□ -1.62
PRP11YDL043C YGR161W-CQ3E744 92 aa4.92□□□□□ -1.62
PRP11YDL043C GAL11P19659 1081 aa4.91□□□□□ -1.62
PRP11YDL043C RPL8BP29453 256 aaKnown RBP4.91□□□□□ -1.62
PRP11YDL043C VBA5P36172 582 aa4.91□□□□□ -1.62
PRP11YDL043C GGA2P38817 585 aaKnown RBP4.91□□□□□ -1.62
PRP11YDL043C IRR1P40541 1150 aa4.91□□□□□ -1.62
PRP11YDL043C HEH2Q03281 663 aa4.91□□□□□ -1.62
PRP11YDL043C REC8Q12188 680 aa4.91□□□□□ -1.62
PRP11YDL043C CIT1P00890 479 aa4.9□□□□□ -1.63
PRP11YDL043C HVG1P0CE11 249 aa4.9□□□□□ -1.63
PRP11YDL043C HSP60P19882 572 aaKnown RBP4.9□□□□□ -1.63
PRP11YDL043C VMA4P22203 233 aaKnown RBP4.9□□□□□ -1.63
PRP11YDL043C ABD1P32783 436 aaPredicted RBP4.9□□□□□ -1.63
PRP11YDL043C TOM20P35180 183 aa4.9□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms