RNA–Protein interactions for RNA: YDL033C

SLM3, Transcript of tRNA-specific 2-thiouridylase, yeastyeast

Gene SLM3, Length 1,254 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLM3YDL033C VAS1P07806 1104 aaKnown RBP8.86□□□□□ -0.99
SLM3YDL033C SEC18P18759 758 aaKnown RBP8.86□□□□□ -0.99
SLM3YDL033C PTK1P36002 662 aaPredicted RBP8.86□□□□□ -0.99
SLM3YDL033C CCT5P40413 562 aaKnown RBP8.86□□□□□ -0.99
SLM3YDL033C YIR042CP40586 236 aa8.86□□□□□ -0.99
SLM3YDL033C HXT17P53631 564 aa8.86□□□□□ -0.99
SLM3YDL033C PPM2Q08282 695 aa8.86□□□□□ -0.99
SLM3YDL033C RRI2Q12348 645 aa8.86□□□□□ -0.99
SLM3YDL033C YOL087CQ99247 1116 aa8.86□□□□□ -0.99
SLM3YDL033C PMA1P05030 918 aaKnown RBP8.85□□□□□ -0.99
SLM3YDL033C RPS19AP07280 144 aaKnown RBP8.85□□□□□ -0.99
SLM3YDL033C RPS19BP07281 144 aaPredicted RBP8.85□□□□□ -0.99
SLM3YDL033C ADP1P25371 1049 aa8.85□□□□□ -0.99
SLM3YDL033C MDL2P33311 773 aa8.85□□□□□ -0.99
SLM3YDL033C GLO3P38682 493 aaKnown RBP8.85□□□□□ -0.99
SLM3YDL033C RTT107P38850 1070 aa8.85□□□□□ -0.99
SLM3YDL033C PEX14P53112 341 aa8.85□□□□□ -0.99
SLM3YDL033C INM2Q05533 292 aa8.85□□□□□ -0.99
SLM3YDL033C GYP5Q12344 894 aa8.85□□□□□ -0.99
SLM3YDL033C SNF3P10870 884 aa8.84□□□□□ -0.99
SLM3YDL033C ELM1P32801 640 aa8.84□□□□□ -0.99
SLM3YDL033C NPR3P38742 1146 aa8.84□□□□□ -0.99
SLM3YDL033C PRP31P49704 494 aaPredicted RBP8.84□□□□□ -0.99
SLM3YDL033C YGL140CP53120 1219 aa8.84□□□□□ -0.99
SLM3YDL033C SML1Q04964 104 aa8.84□□□□□ -0.99
SLM3YDL033C PET111P08468 800 aa8.83□□□□□ -1
SLM3YDL033C TRL1P09880 827 aaKnown RBP8.83□□□□□ -1
SLM3YDL033C VPS41P38959 992 aa8.83□□□□□ -1
SLM3YDL033C VPS13Q07878 3144 aa8.83□□□□□ -1
SLM3YDL033C CDC16P09798 840 aa8.82□□□□□ -1
SLM3YDL033C RPL19AP0CX82 189 aaKnown RBP8.82□□□□□ -1
SLM3YDL033C RPL19BP0CX83 189 aaPredicted RBP8.82□□□□□ -1
SLM3YDL033C JSN1P47135 1091 aaKnown RBP RIP-Chip data8.82□□□□□ -1not detected
SLM3YDL033C PIF1P07271 859 aa8.81□□□□□ -1
SLM3YDL033C PAH1P32567 862 aa8.81□□□□□ -1
SLM3YDL033C IXR1P33417 597 aa8.81□□□□□ -1
SLM3YDL033C OCT1P35999 772 aa8.81□□□□□ -1
SLM3YDL033C YBL028CP38202 106 aa8.81□□□□□ -1
SLM3YDL033C ERG7P38604 731 aa8.81□□□□□ -1
SLM3YDL033C SSF1P38789 453 aaPredicted RBP8.81□□□□□ -1
SLM3YDL033C HAL5P38970 855 aaKnown RBP8.81□□□□□ -1
SLM3YDL033C ACA1P39970 489 aa8.81□□□□□ -1
SLM3YDL033C PSF2P40359 213 aa8.81□□□□□ -1
SLM3YDL033C NET1P47035 1189 aa8.81□□□□□ -1
SLM3YDL033C YNL193WP53870 558 aa8.81□□□□□ -1
SLM3YDL033C SSL2Q00578 843 aa8.81□□□□□ -1
SLM3YDL033C RPN7Q06103 429 aaKnown RBP8.81□□□□□ -1
SLM3YDL033C TLG2Q08144 397 aa8.81□□□□□ -1
SLM3YDL033C TAO3P40468 2376 aa8.81□□□□□ -1
SLM3YDL033C SPT2P06843 333 aaPredicted RBP8.8□□□□□ -1
SLM3YDL033C ATE1P16639 503 aa8.8□□□□□ -1
SLM3YDL033C MAL31P38156 614 aa8.8□□□□□ -1
SLM3YDL033C GDT1P38301 280 aaPredicted RBP8.8□□□□□ -1
SLM3YDL033C YMR102CQ03177 834 aa8.8□□□□□ -1
SLM3YDL033C YPR117WQ06116 2489 aa8.79□□□□□ -1
SLM3YDL033C SRP54P20424 541 aaKnown RBP8.79□□□□□ -1
SLM3YDL033C MSH3P25336 1018 aa8.79□□□□□ -1
SLM3YDL033C MSH1P25846 959 aa8.79□□□□□ -1
SLM3YDL033C PRX1P34227 261 aaKnown RBP8.79□□□□□ -1
SLM3YDL033C MCD4P36051 919 aa8.79□□□□□ -1
SLM3YDL033C SIC1P38634 284 aa8.79□□□□□ -1
SLM3YDL033C ATG1P53104 897 aa8.79□□□□□ -1
SLM3YDL033C NSG2P53898 299 aa8.79□□□□□ -1
SLM3YDL033C ULP1Q02724 621 aa8.79□□□□□ -1
SLM3YDL033C PCL8Q08966 492 aa8.79□□□□□ -1
SLM3YDL033C TRS33Q99394 268 aa8.79□□□□□ -1
SLM3YDL033C TUB2P02557 457 aaKnown RBP8.78□□□□□ -1
SLM3YDL033C SWI3P32591 825 aa8.78□□□□□ -1
SLM3YDL033C SLX5P32828 619 aaKnown RBP8.78□□□□□ -1
SLM3YDL033C BOI1P38041 980 aaKnown RBP8.78□□□□□ -1
SLM3YDL033C BDP1P46678 594 aa8.78□□□□□ -1
SLM3YDL033C PIP2P52960 996 aa8.78□□□□□ -1
SLM3YDL033C COG4Q06096 861 aa8.78□□□□□ -1
SLM3YDL033C YKL068W-AQ3E826 78 aa8.78□□□□□ -1
SLM3YDL033C FLO1P32768 1537 aa8.78□□□□□ -1
SLM3YDL033C TPM1P17536 199 aaKnown RBP8.77□□□□□ -1.01
SLM3YDL033C SWH1P35845 1188 aa8.77□□□□□ -1.01
SLM3YDL033C TTI1P36097 1038 aa8.77□□□□□ -1.01
SLM3YDL033C BYE1P36106 594 aa8.77□□□□□ -1.01
SLM3YDL033C LYS14P40971 790 aa8.77□□□□□ -1.01
SLM3YDL033C CFT2Q12102 859 aaPredicted RBP8.77□□□□□ -1.01
SLM3YDL033C FBP1P09201 348 aa8.76□□□□□ -1.01
SLM3YDL033C FRS2P15625 503 aaKnown RBP8.76□□□□□ -1.01
SLM3YDL033C YDJ1P25491 409 aaKnown RBP8.76□□□□□ -1.01
SLM3YDL033C CDC60P26637 1090 aaKnown RBP8.76□□□□□ -1.01
SLM3YDL033C VAB2P40003 282 aa8.76□□□□□ -1.01
SLM3YDL033C MVP1P40959 511 aaKnown RBP8.76□□□□□ -1.01
SLM3YDL033C TY3A-GQ12173 290 aa8.76□□□□□ -1.01
SLM3YDL033C TY3A-IQ99219 290 aa8.76□□□□□ -1.01
SLM3YDL033C CYB2P00175 591 aa8.75□□□□□ -1.01
SLM3YDL033C HSP82P02829 709 aaKnown RBP8.75□□□□□ -1.01
SLM3YDL033C KIN1P13185 1064 aa8.75□□□□□ -1.01
SLM3YDL033C TFG2P41896 400 aaPredicted RBP8.75□□□□□ -1.01
SLM3YDL033C HGH1P48362 394 aaKnown RBP8.75□□□□□ -1.01
SLM3YDL033C SNU71P53207 620 aaKnown RBP8.75□□□□□ -1.01
SLM3YDL033C YDL124WQ07551 312 aaKnown RBP8.75□□□□□ -1.01
SLM3YDL033C GCD7P32502 381 aaPredicted RBP8.74□□□□□ -1.01
SLM3YDL033C SLD2P34252 453 aa8.74□□□□□ -1.01
SLM3YDL033C GRX7P38068 203 aa8.74□□□□□ -1.01
SLM3YDL033C DOS2P54858 310 aa8.74□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 65.9 ms