RNA–Protein interactions for RNA: YCR073C

SSK22, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeastyeast

Gene SSK22, Length 3,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK22YCR073C DPL1Q05567 589 aa6.43□□□□□ -1.38
SSK22YCR073C STE23Q06010 1027 aa6.43□□□□□ -1.38
SSK22YCR073C NUR1Q12066 484 aa6.43□□□□□ -1.38
SSK22YCR073C RIB2Q12362 591 aaKnown RBP6.43□□□□□ -1.38
SSK22YCR073C YET1P35723 206 aa6.42□□□□□ -1.38
SSK22YCR073C SWH1P35845 1188 aa6.42□□□□□ -1.38
SSK22YCR073C RPT6Q01939 405 aaKnown RBP6.42□□□□□ -1.38
SSK22YCR073C MTC5Q03897 1148 aa6.42□□□□□ -1.38
SSK22YCR073C VMS1Q04311 632 aaKnown RBP6.42□□□□□ -1.38
SSK22YCR073C ABP140Q08641 628 aaKnown RBP6.42□□□□□ -1.38
SSK22YCR073C RAD51P25454 400 aa6.42□□□□□ -1.38
SSK22YCR073C SEC65P29478 273 aa6.42□□□□□ -1.38
SSK22YCR073C RIX1P38883 763 aaPredicted RBP6.42□□□□□ -1.38
SSK22YCR073C APT1P49435 187 aaKnown RBP6.42□□□□□ -1.38
SSK22YCR073C TDA5Q06417 326 aaKnown RBP6.42□□□□□ -1.38
SSK22YCR073C AFT2Q08957 416 aa6.42□□□□□ -1.38
SSK22YCR073C REI1P38344 393 aaPredicted RBP6.42□□□□□ -1.38
SSK22YCR073C PTK2P47116 818 aaKnown RBP6.42□□□□□ -1.38
SSK22YCR073C TAF9Q05027 157 aa6.42□□□□□ -1.38
SSK22YCR073C TUM1Q08686 304 aaKnown RBP6.42□□□□□ -1.38
SSK22YCR073C SEC39Q12745 709 aa6.42□□□□□ -1.38
SSK22YCR073C UBP14P38237 781 aaKnown RBP6.42□□□□□ -1.38
SSK22YCR073C BCD1P38772 366 aa6.42□□□□□ -1.38
SSK22YCR073C YCG1Q06680 1035 aa6.42□□□□□ -1.38
SSK22YCR073C SAP1P39955 897 aaKnown RBP6.41□□□□□ -1.38
SSK22YCR073C ATG3P40344 310 aa6.41□□□□□ -1.38
SSK22YCR073C SHQ1P40486 507 aaPredicted RBP6.41□□□□□ -1.38
SSK22YCR073C CHO2P05374 869 aaKnown RBP6.41□□□□□ -1.38
SSK22YCR073C SPO12P17123 173 aa6.41□□□□□ -1.38
SSK22YCR073C PRE10P21242 288 aaKnown RBP RIP-Chip data6.41□□□□□ -1.38not detected
SSK22YCR073C BMH1P29311 267 aaKnown RBP6.41□□□□□ -1.38
SSK22YCR073C TDA3P38758 523 aa6.41□□□□□ -1.38
SSK22YCR073C YOL075CQ08234 1294 aa6.41□□□□□ -1.38
SSK22YCR073C PPR1P07272 904 aaPredicted RBP6.4□□□□□ -1.38
SSK22YCR073C TFG2P41896 400 aaPredicted RBP6.4□□□□□ -1.38
SSK22YCR073C OSM1P21375 501 aaKnown RBP6.4□□□□□ -1.39
SSK22YCR073C SPT5P27692 1063 aaKnown RBP6.4□□□□□ -1.39
SSK22YCR073C SKI2P35207 1287 aaKnown RBP RIP-Chip data6.4□□□□□ -1.39not detected
SSK22YCR073C SET5P38890 526 aaKnown RBP6.4□□□□□ -1.39
SSK22YCR073C HIR1P32479 840 aa6.4□□□□□ -1.39
SSK22YCR073C KRS1P15180 591 aaKnown RBP6.39□□□□□ -1.39
SSK22YCR073C ADE17P38009 592 aaKnown RBP6.39□□□□□ -1.39
SSK22YCR073C MIP6P38760 659 aaKnown RBP6.39□□□□□ -1.39
SSK22YCR073C DAK2P43550 591 aa6.39□□□□□ -1.39
SSK22YCR073C YKE2P52553 114 aa6.39□□□□□ -1.39
SSK22YCR073C YNL193WP53870 558 aa6.39□□□□□ -1.39
SSK22YCR073C VAC14Q06708 880 aa6.39□□□□□ -1.39
SSK22YCR073C DIT2P21595 489 aa6.39□□□□□ -1.39
SSK22YCR073C TPS3P38426 1054 aaKnown RBP6.39□□□□□ -1.39
SSK22YCR073C UBP5P39944 805 aa6.39□□□□□ -1.39
SSK22YCR073C VFA1P40080 203 aa6.39□□□□□ -1.39
SSK22YCR073C AXL1P40851 1208 aa6.39□□□□□ -1.39
SSK22YCR073C SWI4P25302 1093 aaKnown RBP6.39□□□□□ -1.39
SSK22YCR073C OSH3P38713 996 aaKnown RBP6.39□□□□□ -1.39
SSK22YCR073C OSW7P43611 510 aa6.39□□□□□ -1.39
SSK22YCR073C PRP3Q03338 469 aaPredicted RBP6.39□□□□□ -1.39
SSK22YCR073C RAD53P22216 821 aa6.38□□□□□ -1.39
SSK22YCR073C RRP43P25359 394 aaPredicted RBP6.38□□□□□ -1.39
SSK22YCR073C TUS1Q06412 1307 aa6.38□□□□□ -1.39
SSK22YCR073C MLH2Q07980 695 aa6.38□□□□□ -1.39
SSK22YCR073C SDH5Q08230 162 aa6.38□□□□□ -1.39
SSK22YCR073C OSW1Q08692 278 aa6.38□□□□□ -1.39
SSK22YCR073C GET3Q12154 354 aaKnown RBP6.38□□□□□ -1.39
SSK22YCR073C MPH3P0CE00 602 aa6.38□□□□□ -1.39
SSK22YCR073C NOC2P39744 710 aaKnown RBP6.38□□□□□ -1.39
SSK22YCR073C DIG1Q03063 452 aaKnown RBP6.38□□□□□ -1.39
SSK22YCR073C NIP1P32497 812 aaKnown RBP6.37□□□□□ -1.39
SSK22YCR073C MYO3P36006 1272 aa6.37□□□□□ -1.39
SSK22YCR073C EFM2P38347 419 aa6.37□□□□□ -1.39
SSK22YCR073C ARP5P53946 755 aa6.37□□□□□ -1.39
SSK22YCR073C ERG11P10614 530 aa6.37□□□□□ -1.39
SSK22YCR073C SCJ1P25303 377 aa6.37□□□□□ -1.39
SSK22YCR073C EBS1Q03466 884 aaKnown RBP6.37□□□□□ -1.39
SSK22YCR073C GIN4Q12263 1142 aa6.37□□□□□ -1.39
SSK22YCR073C HEL1P36113 551 aa6.37□□□□□ -1.39
SSK22YCR073C XKS1P42826 600 aa6.37□□□□□ -1.39
SSK22YCR073C FAR11P53917 953 aa6.37□□□□□ -1.39
SSK22YCR073C POM152P39685 1337 aa6.36□□□□□ -1.39
SSK22YCR073C GAL11P19659 1081 aa6.36□□□□□ -1.39
SSK22YCR073C RPN10P38886 268 aaKnown RBP6.36□□□□□ -1.39
SSK22YCR073C CRG1P38892 291 aaRIP-Chip data6.36□□□□□ -1.39 RIP-Chip
SSK22YCR073C RTS1P38903 757 aa6.36□□□□□ -1.39
SSK22YCR073C YNL011CP53980 444 aa6.36□□□□□ -1.39
SSK22YCR073C SEC5P89102 971 aa6.36□□□□□ -1.39
SSK22YCR073C TMA64Q04600 565 aaKnown RBP6.36□□□□□ -1.39
SSK22YCR073C LAA1P39526 2014 aa6.36□□□□□ -1.39
SSK22YCR073C ARG4P04076 463 aaPredicted RBP6.36□□□□□ -1.39
SSK22YCR073C MIF2P35201 549 aa6.36□□□□□ -1.39
SSK22YCR073C OLA1P38219 394 aaKnown RBP6.36□□□□□ -1.39
SSK22YCR073C YHL050CP38721 697 aa6.36□□□□□ -1.39
SSK22YCR073C AKR1P39010 764 aa6.36□□□□□ -1.39
SSK22YCR073C PTP3P40048 928 aa6.36□□□□□ -1.39
SSK22YCR073C YMR147WP40218 223 aaKnown RBP6.36□□□□□ -1.39
SSK22YCR073C THI6P41835 540 aa6.36□□□□□ -1.39
SSK22YCR073C RBA50Q04418 439 aa6.36□□□□□ -1.39
SSK22YCR073C YLR001CQ07895 862 aa6.36□□□□□ -1.39
SSK22YCR073C TPM1P17536 199 aaKnown RBP6.36□□□□□ -1.39
SSK22YCR073C COQ1P18900 473 aa6.36□□□□□ -1.39
SSK22YCR073C STM1P39015 273 aaKnown RBP6.36□□□□□ -1.39
SSK22YCR073C CMS1Q07897 291 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms