RNA–Protein interactions for RNA: YBR097W

VPS15, Transcript of Serine/threonine protein kinase involved in vacuolar protein sorting, yeastyeast

Gene VPS15, Length 4,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS15YBR097W TIF5P38431 405 aaKnown RBP1.82□□□□□ -2.12
VPS15YBR097W PCM1P38628 557 aaKnown RBP1.82□□□□□ -2.12
VPS15YBR097W LAM5P43560 674 aa1.82□□□□□ -2.12
VPS15YBR097W SPC105P53148 917 aa1.82□□□□□ -2.12
VPS15YBR097W UFD2P54860 961 aa1.82□□□□□ -2.12
VPS15YBR097W SEG1Q04279 960 aa1.82□□□□□ -2.12
VPS15YBR097W TRI1Q05024 226 aa1.82□□□□□ -2.12
VPS15YBR097W SPN1Q06505 410 aaPredicted RBP1.82□□□□□ -2.12
VPS15YBR097W YET3Q07451 203 aa1.82□□□□□ -2.12
VPS15YBR097W YBL111CQ3E7Y5 667 aa1.82□□□□□ -2.12
VPS15YBR097W TY2B-BQ12491 1770 aa1.82□□□□□ -2.12
VPS15YBR097W TY4B-PA0A0B7P3V8 1104 aa1.82□□□□□ -2.12
VPS15YBR097W TUF1P02992 437 aaKnown RBP1.82□□□□□ -2.12
VPS15YBR097W CAF20P12962 161 aaKnown RBP1.82□□□□□ -2.12
VPS15YBR097W PRE10P21242 288 aaKnown RBP RIP-Chip data1.82□□□□□ -2.12not detected
VPS15YBR097W PWP1P21304 576 aaKnown RBP1.82□□□□□ -2.12
VPS15YBR097W YCR016WP25617 290 aaKnown RBP1.82□□□□□ -2.12
VPS15YBR097W NGG1P32494 702 aa1.82□□□□□ -2.12
VPS15YBR097W EXO84P38261 753 aa1.82□□□□□ -2.12
VPS15YBR097W BEM4P39011 633 aa1.82□□□□□ -2.12
VPS15YBR097W LOH1P47055 219 aa1.82□□□□□ -2.12
VPS15YBR097W YGR111WP53265 400 aa1.82□□□□□ -2.12
VPS15YBR097W SLU7Q02775 382 aaKnown RBP1.82□□□□□ -2.12
VPS15YBR097W MMT1Q03218 510 aa1.82□□□□□ -2.12
VPS15YBR097W YLR455WQ06188 304 aa1.82□□□□□ -2.12
VPS15YBR097W SPP382Q06411 708 aaPredicted RBP1.82□□□□□ -2.12
VPS15YBR097W YPL191CQ08930 360 aa1.82□□□□□ -2.12
VPS15YBR097W NEW1Q08972 1196 aaKnown RBP1.82□□□□□ -2.12
VPS15YBR097W SEC39Q12745 709 aa1.82□□□□□ -2.12
VPS15YBR097W TY4A-HQ6Q5P6 413 aa1.82□□□□□ -2.12
VPS15YBR097W NOP14Q99207 810 aaKnown RBP1.82□□□□□ -2.12
VPS15YBR097W PET111P08468 800 aa1.82□□□□□ -2.12
VPS15YBR097W KIP2P28743 706 aa1.82□□□□□ -2.12
VPS15YBR097W VPS21P36017 210 aaKnown RBP1.82□□□□□ -2.12
VPS15YBR097W RFC1P38630 861 aaKnown RBP1.82□□□□□ -2.12
VPS15YBR097W RRP3P38712 501 aaKnown RBP1.82□□□□□ -2.12
VPS15YBR097W OTU2P38747 307 aaKnown RBP1.82□□□□□ -2.12
VPS15YBR097W SSF1P38789 453 aaPredicted RBP1.82□□□□□ -2.12
VPS15YBR097W YNG2P38806 282 aaKnown RBP1.82□□□□□ -2.12
VPS15YBR097W YHR131CP38835 850 aa1.82□□□□□ -2.12
VPS15YBR097W RPN3P40016 523 aaKnown RBP1.82□□□□□ -2.12
VPS15YBR097W INA22P40576 216 aa1.82□□□□□ -2.12
VPS15YBR097W MDV1P47025 714 aa1.82□□□□□ -2.12
VPS15YBR097W SAP4P53036 818 aa1.82□□□□□ -2.12
VPS15YBR097W MDR1P53258 950 aa1.82□□□□□ -2.12
VPS15YBR097W GTR1Q00582 310 aa1.82□□□□□ -2.12
VPS15YBR097W TBF1Q02457 562 aa1.82□□□□□ -2.12
VPS15YBR097W NNT1Q05874 261 aa1.82□□□□□ -2.12
VPS15YBR097W LCB5Q06147 687 aaKnown RBP1.82□□□□□ -2.12
VPS15YBR097W MMR1Q06324 491 aa1.82□□□□□ -2.12
VPS15YBR097W ATG23Q06671 453 aa1.82□□□□□ -2.12
VPS15YBR097W FCF2Q12035 217 aaPredicted RBP1.82□□□□□ -2.12
VPS15YBR097W VIK1Q12045 647 aa1.82□□□□□ -2.12
VPS15YBR097W SMC6Q12749 1114 aa1.82□□□□□ -2.12
VPS15YBR097W PDR10P51533 1564 aa1.82□□□□□ -2.12
VPS15YBR097W RPP0P05317 312 aaKnown RBP1.82□□□□□ -2.12
VPS15YBR097W NIP100P33420 868 aa1.82□□□□□ -2.12
VPS15YBR097W YKR015CP36111 568 aa1.82□□□□□ -2.12
VPS15YBR097W TCD1P38756 429 aa1.82□□□□□ -2.12
VPS15YBR097W MPH1P40562 993 aa1.82□□□□□ -2.12
VPS15YBR097W PHB1P40961 287 aa1.82□□□□□ -2.12
VPS15YBR097W VTC2P43585 828 aa1.82□□□□□ -2.12
VPS15YBR097W CNN1P43618 361 aa1.82□□□□□ -2.12
VPS15YBR097W TMA22P47089 198 aaPredicted RBP1.82□□□□□ -2.12
VPS15YBR097W VID30P53076 958 aa1.82□□□□□ -2.12
VPS15YBR097W UTP22P53254 1237 aaPredicted RBP1.82□□□□□ -2.12
VPS15YBR097W PBP1P53297 722 aaKnown RBP1.82□□□□□ -2.12
VPS15YBR097W CPR6P53691 371 aaKnown RBP1.82□□□□□ -2.12
VPS15YBR097W AOS1Q06624 347 aa1.82□□□□□ -2.12
VPS15YBR097W PEX19Q07418 342 aa1.82□□□□□ -2.12
VPS15YBR097W ENT1Q12518 454 aa1.82□□□□□ -2.12
VPS15YBR097W LSO2Q3E772 92 aaKnown RBP1.82□□□□□ -2.12
VPS15YBR097W YOS9Q99220 542 aa1.82□□□□□ -2.12
VPS15YBR097W RPB4P20433 221 aaPredicted RBP1.81□□□□□ -2.12
VPS15YBR097W ANP1P32629 500 aa1.81□□□□□ -2.12
VPS15YBR097W YKU70P32807 602 aa1.81□□□□□ -2.12
VPS15YBR097W SEC8P32855 1065 aa1.81□□□□□ -2.12
VPS15YBR097W GDH2P33327 1092 aaKnown RBP1.81□□□□□ -2.12
VPS15YBR097W FES1P38260 290 aa1.81□□□□□ -2.12
VPS15YBR097W IES2P40154 320 aa1.81□□□□□ -2.12
VPS15YBR097W UTP25P40498 721 aaKnown RBP1.81□□□□□ -2.12
VPS15YBR097W REF2P42073 533 aaPredicted RBP1.81□□□□□ -2.12
VPS15YBR097W SHE4P51534 789 aa1.81□□□□□ -2.12
VPS15YBR097W DUS1P53759 423 aaKnown RBP1.81□□□□□ -2.12
VPS15YBR097W NPL3Q01560 414 aaKnown RBP RIP-Chip data1.81□□□□□ -2.12not detected
VPS15YBR097W MSH6Q03834 1242 aa1.81□□□□□ -2.12
VPS15YBR097W CSM3Q04659 317 aa1.81□□□□□ -2.12
VPS15YBR097W GSF2Q04697 403 aaKnown RBP1.81□□□□□ -2.12
VPS15YBR097W SHS1Q07657 551 aa1.81□□□□□ -2.12
VPS15YBR097W MED4Q12343 284 aa1.81□□□□□ -2.12
VPS15YBR097W GCN2P15442 1659 aa1.81□□□□□ -2.12
VPS15YBR097W RPC53P25441 422 aa1.81□□□□□ -2.12
VPS15YBR097W DAL80P26343 269 aa1.81□□□□□ -2.12
VPS15YBR097W BRN1P38170 754 aa1.81□□□□□ -2.12
VPS15YBR097W SIP3P38717 1229 aa1.81□□□□□ -2.12
VPS15YBR097W TIF11P38912 153 aaKnown RBP1.81□□□□□ -2.12
VPS15YBR097W TIF4631P39935 952 aaKnown RBP1.81□□□□□ -2.12
VPS15YBR097W GTT3P39996 337 aa1.81□□□□□ -2.12
VPS15YBR097W ARB1P40024 610 aaKnown RBP1.81□□□□□ -2.12
VPS15YBR097W MON1P53129 644 aa1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms