RNA–Protein interactions for RNA: ENST00000641828.1

CASC19-260, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 2,001 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-260ENST00000641828 BRD1O95696 1058 aa7.9□□□□□ -1.15
CASC19-260ENST00000641828 EPS8L1Q8TE68 723 aa7.9□□□□□ -1.15
CASC19-260ENST00000641828 LTBP4Q8N2S1 1624 aa7.89□□□□□ -1.15
CASC19-260ENST00000641828 PALM3A6NDB9 673 aaPredicted RBP7.89□□□□□ -1.15
CASC19-260ENST00000641828 POTEB2H3BUK9 544 aa7.89□□□□□ -1.15
CASC19-260ENST00000641828 GRIPAP1Q4V328 841 aa7.89□□□□□ -1.15
CASC19-260ENST00000641828 PTPRTO14522 1441 aa7.89□□□□□ -1.15
CASC19-260ENST00000641828 FER1L4A9Z1Z3 1794 aa7.88□□□□□ -1.15
CASC19-260ENST00000641828 EIF5BO60841 1220 aaKnown RBP7.88□□□□□ -1.15
CASC19-260ENST00000641828 RAPGEF3O95398 923 aa7.88□□□□□ -1.15
CASC19-260ENST00000641828 KCNA1Q09470 495 aa7.88□□□□□ -1.15
CASC19-260ENST00000641828 FUT2Q10981 343 aa7.88□□□□□ -1.15
CASC19-260ENST00000641828 SP7Q8TDD2 431 aaPredicted RBP7.88□□□□□ -1.15
CASC19-260ENST00000641828 PKNOX2Q96KN3 472 aa7.88□□□□□ -1.15
CASC19-260ENST00000641828 MTMR7Q9Y216 660 aa7.88□□□□□ -1.15
CASC19-260ENST00000641828 POGZQ7Z3K3 1410 aa7.88□□□□□ -1.15
CASC19-260ENST00000641828 BIVM-ERCC5R4GMW8 1640 aa7.88□□□□□ -1.15
CASC19-260ENST00000641828 SLC4A3P48751 1232 aa7.88□□□□□ -1.15
CASC19-260ENST00000641828 HDGFP51858 240 aaKnown RBP7.88□□□□□ -1.15
CASC19-260ENST00000641828 B4GALNT3Q6L9W6 998 aa7.88□□□□□ -1.15
CASC19-260ENST00000641828 UCN2Q96RP3 112 aa7.88□□□□□ -1.15
CASC19-260ENST00000641828 SEPT9Q9UHD8 586 aaPredicted RBP7.88□□□□□ -1.15
CASC19-260ENST00000641828 RABGEF1Q9UJ41 708 aa7.88□□□□□ -1.15
CASC19-260ENST00000641828 LMOD1P29536 600 aaPredicted RBP7.87□□□□□ -1.15
CASC19-260ENST00000641828 SOX11P35716 441 aa7.87□□□□□ -1.15
CASC19-260ENST00000641828 CCNB3Q8WWL7 1395 aa7.87□□□□□ -1.15
CASC19-260ENST00000641828 RAB3GAP2Q9H2M9 1393 aa7.86□□□□□ -1.15
CASC19-260ENST00000641828 PRR7Q8TB68 274 aa7.86□□□□□ -1.15
CASC19-260ENST00000641828 TFIP11Q9UBB9 837 aaKnown RBP7.86□□□□□ -1.15
CASC19-260ENST00000641828 HSPA1LP34931 641 aa7.86□□□□□ -1.15
CASC19-260ENST00000641828 PSEN2P49810 448 aa7.86□□□□□ -1.15
CASC19-260ENST00000641828 MLECQ14165 292 aa7.86□□□□□ -1.15
CASC19-260ENST00000641828 NR6A1Q15406 480 aa7.86□□□□□ -1.15
CASC19-260ENST00000641828 MAMSTRQ6ZN01 415 aa7.86□□□□□ -1.15
CASC19-260ENST00000641828 SLF2Q8IX21 1173 aa7.86□□□□□ -1.15
CASC19-260ENST00000641828 CARNS1A5YM72 827 aa7.85□□□□□ -1.15
CASC19-260ENST00000641828 SNPHO15079 494 aa7.85□□□□□ -1.15
CASC19-260ENST00000641828 PPM1GO15355 546 aaPredicted RBP7.85□□□□□ -1.15
CASC19-260ENST00000641828 CFHP08603 1231 aa7.85□□□□□ -1.15
CASC19-260ENST00000641828 SYMPKQ92797 1274 aaKnown RBP7.85□□□□□ -1.15
CASC19-260ENST00000641828 FANCAO15360 1455 aa7.85□□□□□ -1.15
CASC19-260ENST00000641828 PHLDB1Q86UU1 1377 aa7.85□□□□□ -1.15
CASC19-260ENST00000641828 ATP6V1AP38606 617 aa7.85□□□□□ -1.15
CASC19-260ENST00000641828 GLIPR1L2Q4G1C9 344 aa7.85□□□□□ -1.15
CASC19-260ENST00000641828 TTC37Q6PGP7 1564 aa7.84□□□□□ -1.15
CASC19-260ENST00000641828 SEMA3FQ13275 785 aa7.84□□□□□ -1.15
CASC19-260ENST00000641828 FAM98CQ17RN3 349 aaKnown RBP7.84□□□□□ -1.15
CASC19-260ENST00000641828 ARHGEF40Q8TER5 1519 aa7.84□□□□□ -1.15
CASC19-260ENST00000641828 SETD5Q9C0A6 1442 aa7.84□□□□□ -1.15
CASC19-260ENST00000641828 PER1O15534 1290 aaPredicted RBP7.83□□□□□ -1.16
CASC19-260ENST00000641828 NEFMP07197 916 aa7.83□□□□□ -1.16
CASC19-260ENST00000641828 KANK4Q5T7N3 995 aaPredicted RBP7.83□□□□□ -1.16
CASC19-260ENST00000641828 MAFBQ9Y5Q3 323 aaPredicted RBP7.83□□□□□ -1.16
CASC19-260ENST00000641828 RAPGEF2Q9Y4G8 1499 aa7.83□□□□□ -1.16
CASC19-260ENST00000641828 UHRF1BP1Q6BDS2 1440 aa7.83□□□□□ -1.16
CASC19-260ENST00000641828 PIP4K2BP78356 416 aa7.83□□□□□ -1.16
CASC19-260ENST00000641828 FOXD4L5Q5VV16 416 aaPredicted RBP7.83□□□□□ -1.16
CASC19-260ENST00000641828 SAMD7Q7Z3H4 446 aa7.83□□□□□ -1.16
CASC19-260ENST00000641828 PNMA1Q8ND90 353 aa7.83□□□□□ -1.16
CASC19-260ENST00000641828 FOXD4L4Q8WXT5 416 aaPredicted RBP7.83□□□□□ -1.16
CASC19-260ENST00000641828 SLC4A5Q9BY07 1137 aa7.83□□□□□ -1.16
CASC19-260ENST00000641828 IQGAP2Q13576 1575 aa7.82□□□□□ -1.16
CASC19-260ENST00000641828 ATG7O95352 703 aa7.82□□□□□ -1.16
CASC19-260ENST00000641828 FRMPD1Q5SYB0 1578 aa7.82□□□□□ -1.16
CASC19-260ENST00000641828 CDCA8Q53HL2 280 aa7.81□□□□□ -1.16
CASC19-260ENST00000641828 RETREG3Q86VR2 466 aa7.81□□□□□ -1.16
CASC19-260ENST00000641828 SIN3AQ96ST3 1273 aa7.81□□□□□ -1.16
CASC19-260ENST00000641828 ZBED9Q6R2W3 1325 aa7.81□□□□□ -1.16
CASC19-260ENST00000641828 SETD1BQ9UPS6 1966 aaKnown RBP7.81□□□□□ -1.16
CASC19-260ENST00000641828 ARHGAP33O14559 1287 aa7.81□□□□□ -1.16
CASC19-260ENST00000641828 RNF40O75150 1001 aa7.81□□□□□ -1.16
CASC19-260ENST00000641828 CEBPAP49715 358 aaPredicted RBP7.81□□□□□ -1.16
CASC19-260ENST00000641828 EIF4G2P78344 907 aaKnown RBP eCLIP7.81□□□□□ -1.16
CASC19-260ENST00000641828 TBC1D9Q6ZT07 1266 aa7.81□□□□□ -1.16
CASC19-260ENST00000641828 DISP1Q96F81 1524 aa7.8□□□□□ -1.16
CASC19-260ENST00000641828 TMEM88BA6NKF7 163 aa7.8□□□□□ -1.16
CASC19-260ENST00000641828 HIRIP3Q9BW71 556 aaPredicted RBP7.8□□□□□ -1.16
CASC19-260ENST00000641828 AKNAQ7Z591 1439 aa7.8□□□□□ -1.16
CASC19-260ENST00000641828 VRTNQ9H8Y1 702 aa7.79□□□□□ -1.16
CASC19-260ENST00000641828 IVNS1ABPQ9Y6Y0 642 aa7.79□□□□□ -1.16
CASC19-260ENST00000641828 ATP9BO43861 1147 aa7.79□□□□□ -1.16
CASC19-260ENST00000641828 KMT5BQ4FZB7 885 aa7.79□□□□□ -1.16
CASC19-260ENST00000641828 DMRTA1Q5VZB9 504 aa7.79□□□□□ -1.16
CASC19-260ENST00000641828 DESI1Q6ICB0 168 aa7.79□□□□□ -1.16
CASC19-260ENST00000641828 FAM43AQ8N2R8 423 aa7.79□□□□□ -1.16
CASC19-260ENST00000641828 NEO1Q92859 1461 aa7.79□□□□□ -1.16
CASC19-260ENST00000641828 MORN1Q5T089 497 aa7.78□□□□□ -1.16
CASC19-260ENST00000641828 POTEEQ6S8J3 1075 aa7.78□□□□□ -1.16
CASC19-260ENST00000641828 BRPF3Q9ULD4 1205 aa7.78□□□□□ -1.16
CASC19-260ENST00000641828 SIGLEC1Q9BZZ2 1709 aa7.78□□□□□ -1.16
CASC19-260ENST00000641828 LAPTM4BQ86VI4 370 aa7.78□□□□□ -1.16
CASC19-260ENST00000641828 ZNF335Q9H4Z2 1342 aaPredicted RBP7.77□□□□□ -1.17
CASC19-260ENST00000641828 NR1H3Q13133 447 aa7.77□□□□□ -1.17
CASC19-260ENST00000641828 Q3C1V9 767 aa7.77□□□□□ -1.17
CASC19-260ENST00000641828 VPS9D1Q9Y2B5 631 aa7.77□□□□□ -1.17
CASC19-260ENST00000641828 SLC27A5Q9Y2P5 690 aa7.77□□□□□ -1.17
CASC19-260ENST00000641828 TOM1O60784 492 aa7.76□□□□□ -1.17
CASC19-260ENST00000641828 RBM25P49756 843 aaKnown RBP7.76□□□□□ -1.17
CASC19-260ENST00000641828 PUS10Q3MIT2 529 aaKnown RBP7.76□□□□□ -1.17
CASC19-260ENST00000641828 LYPD8Q6UX82 237 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms