RNA–Protein interactions for RNA: ENST00000639482.1

SPIN3-222, Transcript of spindlin family member 3, human

TSL 3

Gene SPIN3, Length 3,719 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-222	ENST00000639482	TNPO1	Q92973	898 aa	Known RBP	12.56	□□□□□ -0.4
SPIN3-222	ENST00000639482	RERE	Q9P2R6	1566 aa		12.56	□□□□□ -0.4
SPIN3-222	ENST00000639482	DIAPH1	O60610	1272 aa	Known RBP	12.56	□□□□□ -0.4
SPIN3-222	ENST00000639482	MRE11	P49959	708 aa		12.55	□□□□□ -0.4
SPIN3-222	ENST00000639482	FOXD4L5	Q5VV16	416 aa	Predicted RBP	12.55	□□□□□ -0.4
SPIN3-222	ENST00000639482	ATF7IP	Q6VMQ6	1270 aa		12.55	□□□□□ -0.4
SPIN3-222	ENST00000639482	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	12.55	□□□□□ -0.4
SPIN3-222	ENST00000639482	PHACTR3	Q96KR7	559 aa		12.55	□□□□□ -0.4
SPIN3-222	ENST00000639482	EID1	Q9Y6B2	187 aa		12.55	□□□□□ -0.4
SPIN3-222	ENST00000639482	NRXN3	Q9Y4C0	1643 aa		12.55	□□□□□ -0.4
SPIN3-222	ENST00000639482	GAS2L3	Q86XJ1	694 aa		12.55	□□□□□ -0.4
SPIN3-222	ENST00000639482	CCDC61	Q9Y6R9	512 aa		12.55	□□□□□ -0.4
SPIN3-222	ENST00000639482	SHPRH	Q149N8	1683 aa		12.55	□□□□□ -0.4
SPIN3-222	ENST00000639482	DDX19B	Q9UMR2	479 aa		12.55	□□□□□ -0.4
SPIN3-222	ENST00000639482	NLRP1	Q9C000	1473 aa		12.54	□□□□□ -0.4
SPIN3-222	ENST00000639482	ESPN	B1AK53	854 aa		12.54	□□□□□ -0.4
SPIN3-222	ENST00000639482	PRKAR2B	P31323	418 aa		12.54	□□□□□ -0.4
SPIN3-222	ENST00000639482	CD2BP2	O95400	341 aa	Known RBP	12.54	□□□□□ -0.4
SPIN3-222	ENST00000639482	HDGF	P51858	240 aa	Known RBP	12.54	□□□□□ -0.4
SPIN3-222	ENST00000639482	NGEF	Q8N5V2	710 aa		12.54	□□□□□ -0.4
SPIN3-222	ENST00000639482	ERBB4	Q15303	1308 aa		12.54	□□□□□ -0.4
SPIN3-222	ENST00000639482	ADAMTS13	Q76LX8	1427 aa		12.53	□□□□□ -0.4
SPIN3-222	ENST00000639482	DDX11L8	A8MPP1	907 aa		12.53	□□□□□ -0.4
SPIN3-222	ENST00000639482	TMPO	P42166	694 aa	Known RBP	12.53	□□□□□ -0.4
SPIN3-222	ENST00000639482	PUS7	Q96PZ0	661 aa	Known RBP	12.53	□□□□□ -0.4
SPIN3-222	ENST00000639482	NINL	Q9Y2I6	1382 aa		12.53	□□□□□ -0.4
SPIN3-222	ENST00000639482	ACE	P12821	1306 aa		12.53	□□□□□ -0.4
SPIN3-222	ENST00000639482	PTPRU	Q92729	1446 aa		12.53	□□□□□ -0.4
SPIN3-222	ENST00000639482	FSD2	A1L4K1	749 aa		12.52	□□□□□ -0.4
SPIN3-222	ENST00000639482	DCTN1	Q14203	1278 aa		12.52	□□□□□ -0.4
SPIN3-222	ENST00000639482	SSFA2	P28290	1259 aa		12.52	□□□□□ -0.41
SPIN3-222	ENST00000639482	PLEKHF1	Q96S99	279 aa		12.52	□□□□□ -0.41
SPIN3-222	ENST00000639482	TRIM35	Q9UPQ4	493 aa		12.52	□□□□□ -0.41
SPIN3-222	ENST00000639482	FAM83G	A6ND36	823 aa		12.52	□□□□□ -0.41
SPIN3-222	ENST00000639482	KCNA6	P17658	529 aa		12.52	□□□□□ -0.41
SPIN3-222	ENST00000639482	GLIPR1L2	Q4G1C9	344 aa		12.52	□□□□□ -0.41
SPIN3-222	ENST00000639482	GBP4	Q96PP9	640 aa		12.52	□□□□□ -0.41
SPIN3-222	ENST00000639482	COG3	Q96JB2	828 aa		12.51	□□□□□ -0.41
SPIN3-222	ENST00000639482	DDX49	Q9Y6V7	483 aa	Known RBP	12.51	□□□□□ -0.41
SPIN3-222	ENST00000639482	CPS1	P31327	1500 aa		12.51	□□□□□ -0.41
SPIN3-222	ENST00000639482	CLCN1	P35523	988 aa		12.51	□□□□□ -0.41
SPIN3-222	ENST00000639482	AEBP1	Q8IUX7	1158 aa		12.51	□□□□□ -0.41
SPIN3-222	ENST00000639482	C14orf37	Q86TY3	774 aa		12.51	□□□□□ -0.41
SPIN3-222	ENST00000639482	SETD1A	O15047	1707 aa	Known RBP	12.5	□□□□□ -0.41
SPIN3-222	ENST00000639482	CHD1L	Q86WJ1	897 aa		12.5	□□□□□ -0.41
SPIN3-222	ENST00000639482	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	12.49	□□□□□ -0.41
SPIN3-222	ENST00000639482	FOXD4L3	Q6VB84	417 aa	Predicted RBP	12.49	□□□□□ -0.41
SPIN3-222	ENST00000639482	ANP32B	Q92688	251 aa	Known RBP	12.49	□□□□□ -0.41
SPIN3-222	ENST00000639482	UBR1	Q8IWV7	1749 aa		12.49	□□□□□ -0.41
SPIN3-222	ENST00000639482	CHAMP1	Q96JM3	812 aa		12.49	□□□□□ -0.41
SPIN3-222	ENST00000639482	NSD2	O96028	1365 aa		12.49	□□□□□ -0.41
SPIN3-222	ENST00000639482	HSP90AB2P	Q58FF8	381 aa		12.49	□□□□□ -0.41
SPIN3-222	ENST00000639482	NGDN	Q8NEJ9	315 aa	Known RBP	12.49	□□□□□ -0.41
SPIN3-222	ENST00000639482	IPO8	O15397	1037 aa	Known RBP	12.48	□□□□□ -0.41
SPIN3-222	ENST00000639482	RBM10	P98175	930 aa	Known RBP	12.48	□□□□□ -0.41
SPIN3-222	ENST00000639482	MCTP1	Q6DN14	999 aa		12.48	□□□□□ -0.41
SPIN3-222	ENST00000639482	NOL8	Q76FK4	1167 aa	Known RBP	12.48	□□□□□ -0.41
SPIN3-222	ENST00000639482	THEMIS	Q8N1K5	641 aa	Predicted RBP	12.48	□□□□□ -0.41
SPIN3-222	ENST00000639482	GAS2L2	Q8NHY3	880 aa		12.48	□□□□□ -0.41
SPIN3-222	ENST00000639482	GOLGA6L22	H0YM25	854 aa		12.47	□□□□□ -0.41
SPIN3-222	ENST00000639482	XPC	Q01831	940 aa	Predicted RBP	12.47	□□□□□ -0.41
SPIN3-222	ENST00000639482	ZBTB40	Q9NUA8	1239 aa		12.47	□□□□□ -0.41
SPIN3-222	ENST00000639482	CAVIN1	Q6NZI2	390 aa	Known RBP	12.47	□□□□□ -0.41
SPIN3-222	ENST00000639482	TBC1D9	Q6ZT07	1266 aa		12.47	□□□□□ -0.41
SPIN3-222	ENST00000639482	SMC5	Q8IY18	1101 aa		12.47	□□□□□ -0.41
SPIN3-222	ENST00000639482	IQSEC2	Q5JU85	1478 aa		12.47	□□□□□ -0.41
SPIN3-222	ENST00000639482	NASP	P49321	788 aa	Predicted RBP	12.46	□□□□□ -0.41
SPIN3-222	ENST00000639482	HDAC1	Q13547	482 aa	Predicted RBP	12.46	□□□□□ -0.41
SPIN3-222	ENST00000639482	MPND	Q8N594	471 aa		12.46	□□□□□ -0.41
SPIN3-222	ENST00000639482	PHF23	Q9BUL5	403 aa	Predicted RBP	12.46	□□□□□ -0.41
SPIN3-222	ENST00000639482	C3	P01024	1663 aa		12.46	□□□□□ -0.41
SPIN3-222	ENST00000639482	AAMP	Q13685	434 aa		12.46	□□□□□ -0.41
SPIN3-222	ENST00000639482	TSPYL6	Q8N831	410 aa		12.46	□□□□□ -0.41
SPIN3-222	ENST00000639482	LTV1	Q96GA3	475 aa	Predicted RBP	12.46	□□□□□ -0.41
SPIN3-222	ENST00000639482	ZNF692	Q9BU19	519 aa	Predicted RBP	12.46	□□□□□ -0.41
SPIN3-222	ENST00000639482	TTC21B	Q7Z4L5	1316 aa		12.46	□□□□□ -0.42
SPIN3-222	ENST00000639482	COL3A1	P02461	1466 aa	Predicted RBP	12.46	□□□□□ -0.42
SPIN3-222	ENST00000639482	PKNOX2	Q96KN3	472 aa		12.46	□□□□□ -0.42
SPIN3-222	ENST00000639482	NUCB1	Q02818	461 aa		12.45	□□□□□ -0.42
SPIN3-222	ENST00000639482	CPSF1	Q10570	1443 aa	Known RBP	12.45	□□□□□ -0.42
SPIN3-222	ENST00000639482	ZMYND15	Q9H091	742 aa		12.45	□□□□□ -0.42
SPIN3-222	ENST00000639482	PLEKHG1	Q9ULL1	1385 aa		12.45	□□□□□ -0.42
SPIN3-222	ENST00000639482	ATP7B	P35670	1465 aa		12.45	□□□□□ -0.42
SPIN3-222	ENST00000639482	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	12.45	□□□□□ -0.42
SPIN3-222	ENST00000639482	SULT6B1	Q6IMI4	303 aa		12.45	□□□□□ -0.42
SPIN3-222	ENST00000639482	IL13	P35225	146 aa		12.45	□□□□□ -0.42
SPIN3-222	ENST00000639482	MAP2	P11137	1827 aa	Known RBP	12.44	□□□□□ -0.42
SPIN3-222	ENST00000639482	USP32	Q8NFA0	1604 aa		12.44	□□□□□ -0.42
SPIN3-222	ENST00000639482		K7ELQ4	463 aa	Predicted RBP	12.44	□□□□□ -0.42
SPIN3-222	ENST00000639482	MSN	P26038	577 aa	Known RBP	12.44	□□□□□ -0.42
SPIN3-222	ENST00000639482	KRT24	Q2M2I5	525 aa		12.44	□□□□□ -0.42
SPIN3-222	ENST00000639482	KIAA1211	Q6ZU35	1233 aa		12.44	□□□□□ -0.42
SPIN3-222	ENST00000639482	C16orf71	Q8IYS4	520 aa	Predicted RBP	12.44	□□□□□ -0.42
SPIN3-222	ENST00000639482	PKP1	Q13835	747 aa		12.44	□□□□□ -0.42
SPIN3-222	ENST00000639482	DLC1	Q96QB1	1528 aa		12.43	□□□□□ -0.42
SPIN3-222	ENST00000639482	KIF16B	Q96L93	1317 aa		12.43	□□□□□ -0.42
SPIN3-222	ENST00000639482	CCDC27	Q2M243	656 aa		12.43	□□□□□ -0.42
SPIN3-222	ENST00000639482	EDC4	Q6P2E9	1401 aa	Known RBP	12.43	□□□□□ -0.42
SPIN3-222	ENST00000639482	MIS18A	Q9NYP9	233 aa		12.43	□□□□□ -0.42
SPIN3-222	ENST00000639482	FOXO3	O43524	673 aa		12.42	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms