RNA–Protein interactions for RNA: ENST00000619186.4

TP53-224, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,271 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-224	ENST00000619186	EID1	Q9Y6B2	187 aa		13.89	□□□□□ -0.19
TP53-224	ENST00000619186	PLEKHG1	Q9ULL1	1385 aa		13.89	□□□□□ -0.19
TP53-224	ENST00000619186	NFKBIB	Q15653	356 aa		13.88	□□□□□ -0.19
TP53-224	ENST00000619186	FTSJ3	Q8IY81	847 aa	Known RBP	13.88	□□□□□ -0.19
TP53-224	ENST00000619186	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.88	□□□□□ -0.19
TP53-224	ENST00000619186	PMFBP1	Q8TBY8	1022 aa		13.88	□□□□□ -0.19
TP53-224	ENST00000619186	TMEM57	Q8N5G2	664 aa		13.87	□□□□□ -0.19
TP53-224	ENST00000619186	AMOTL2	Q9Y2J4	779 aa		13.87	□□□□□ -0.19
TP53-224	ENST00000619186	ARHGAP23	Q9P227	1491 aa		13.87	□□□□□ -0.19
TP53-224	ENST00000619186	RRS1	Q15050	365 aa	Known RBP	13.87	□□□□□ -0.19
TP53-224	ENST00000619186	ITPRIP	Q8IWB1	547 aa		13.87	□□□□□ -0.19
TP53-224	ENST00000619186	PRR36	Q9H6K5	1346 aa		13.87	□□□□□ -0.19
TP53-224	ENST00000619186	SLIT1	O75093	1534 aa		13.86	□□□□□ -0.19
TP53-224	ENST00000619186	CPS1	P31327	1500 aa		13.86	□□□□□ -0.19
TP53-224	ENST00000619186	PPIP5K1	Q6PFW1	1433 aa		13.86	□□□□□ -0.19
TP53-224	ENST00000619186	ATF7IP	Q6VMQ6	1270 aa		13.86	□□□□□ -0.19
TP53-224	ENST00000619186	RBM33	Q96EV2	1170 aa	Known RBP	13.86	□□□□□ -0.19
TP53-224	ENST00000619186	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.86	□□□□□ -0.19
TP53-224	ENST00000619186	FAM135B	Q49AJ0	1406 aa		13.86	□□□□□ -0.19
TP53-224	ENST00000619186	NUDT16	Q96DE0	195 aa	Known RBP	13.85	□□□□□ -0.19
TP53-224	ENST00000619186	CPSF1	Q10570	1443 aa	Known RBP	13.85	□□□□□ -0.19
TP53-224	ENST00000619186	IGSF3	O75054	1194 aa		13.85	□□□□□ -0.19
TP53-224	ENST00000619186	TSPYL6	Q8N831	410 aa		13.85	□□□□□ -0.19
TP53-224	ENST00000619186	TECPR2	O15040	1411 aa		13.84	□□□□□ -0.19
TP53-224	ENST00000619186	ATP7B	P35670	1465 aa		13.84	□□□□□ -0.19
TP53-224	ENST00000619186	ADAMTSL3	P82987	1691 aa		13.84	□□□□□ -0.19
TP53-224	ENST00000619186	ELL2	O00472	640 aa	Predicted RBP	13.84	□□□□□ -0.19
TP53-224	ENST00000619186	FCHSD2	O94868	740 aa		13.84	□□□□□ -0.19
TP53-224	ENST00000619186	CDC42BPG	Q6DT37	1551 aa		13.83	□□□□□ -0.2
TP53-224	ENST00000619186	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.83	□□□□□ -0.2
TP53-224	ENST00000619186	IL13	P35225	146 aa		13.83	□□□□□ -0.2
TP53-224	ENST00000619186	RWDD1	Q9H446	243 aa	Predicted RBP	13.83	□□□□□ -0.2
TP53-224	ENST00000619186	IL16	Q14005	1332 aa		13.83	□□□□□ -0.2
TP53-224	ENST00000619186	KNDC1	Q76NI1	1749 aa		13.83	□□□□□ -0.2
TP53-224	ENST00000619186	FAM83G	A6ND36	823 aa		13.83	□□□□□ -0.2
TP53-224	ENST00000619186	FRAT2	O75474	233 aa	Predicted RBP	13.83	□□□□□ -0.2
TP53-224	ENST00000619186	CT47B1	P0C2W7	299 aa	Predicted RBP	13.82	□□□□□ -0.2
TP53-224	ENST00000619186	USP35	Q9P2H5	1018 aa		13.81	□□□□□ -0.2
TP53-224	ENST00000619186	TBX22	Q9Y458	520 aa		13.81	□□□□□ -0.2
TP53-224	ENST00000619186	KCNA6	P17658	529 aa		13.81	□□□□□ -0.2
TP53-224	ENST00000619186	DCTN1	Q14203	1278 aa		13.81	□□□□□ -0.2
TP53-224	ENST00000619186	SIRT1	Q96EB6	747 aa		13.81	□□□□□ -0.2
TP53-224	ENST00000619186	ZBTB40	Q9NUA8	1239 aa		13.81	□□□□□ -0.2
TP53-224	ENST00000619186	AAMP	Q13685	434 aa		13.8	□□□□□ -0.2
TP53-224	ENST00000619186	NFE2L2	Q16236	605 aa		13.8	□□□□□ -0.2
TP53-224	ENST00000619186	C1orf115	Q9H7X2	142 aa		13.8	□□□□□ -0.2
TP53-224	ENST00000619186	CCDC61	Q9Y6R9	512 aa		13.8	□□□□□ -0.2
TP53-224	ENST00000619186	EDC4	Q6P2E9	1401 aa	Known RBP	13.79	□□□□□ -0.2
TP53-224	ENST00000619186	DDX19B	Q9UMR2	479 aa		13.79	□□□□□ -0.2
TP53-224	ENST00000619186	DLG5	Q8TDM6	1919 aa		13.79	□□□□□ -0.2
TP53-224	ENST00000619186	VAMP4	O75379	141 aa		13.79	□□□□□ -0.2
TP53-224	ENST00000619186	HDAC1	Q13547	482 aa	Predicted RBP	13.79	□□□□□ -0.2
TP53-224	ENST00000619186	AEBP1	Q8IUX7	1158 aa		13.79	□□□□□ -0.2
TP53-224	ENST00000619186	MBIP	Q9NS73	344 aa		13.79	□□□□□ -0.2
TP53-224	ENST00000619186	TBC1D32	Q96NH3	1257 aa		13.78	□□□□□ -0.2
TP53-224	ENST00000619186	SLK	Q9H2G2	1235 aa	Predicted RBP	13.78	□□□□□ -0.2
TP53-224	ENST00000619186	DHX37	Q8IY37	1157 aa	Known RBP	13.78	□□□□□ -0.2
TP53-224	ENST00000619186	C8orf58	Q8NAV2	365 aa		13.77	□□□□□ -0.21
TP53-224	ENST00000619186	MON2	Q7Z3U7	1717 aa		13.77	□□□□□ -0.21
TP53-224	ENST00000619186	ANKLE2	Q86XL3	938 aa		13.76	□□□□□ -0.21
TP53-224	ENST00000619186	SMC5	Q8IY18	1101 aa		13.76	□□□□□ -0.21
TP53-224	ENST00000619186	RGPD8	O14715	1765 aa	Predicted RBP	13.76	□□□□□ -0.21
TP53-224	ENST00000619186	PDE4C	Q08493	712 aa		13.76	□□□□□ -0.21
TP53-224	ENST00000619186	KRT24	Q2M2I5	525 aa		13.76	□□□□□ -0.21
TP53-224	ENST00000619186	MRPL50	Q8N5N7	158 aa	Known RBP	13.76	□□□□□ -0.21
TP53-224	ENST00000619186	IL27	Q8NEV9	243 aa		13.76	□□□□□ -0.21
TP53-224	ENST00000619186	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.76	□□□□□ -0.21
TP53-224	ENST00000619186	ZNF853	P0CG23	659 aa		13.75	□□□□□ -0.21
TP53-224	ENST00000619186	BRD2	P25440	801 aa	Known RBP	13.75	□□□□□ -0.21
TP53-224	ENST00000619186	COG3	Q96JB2	828 aa		13.75	□□□□□ -0.21
TP53-224	ENST00000619186	TBC1D2	Q9BYX2	928 aa		13.75	□□□□□ -0.21
TP53-224	ENST00000619186	LNPK	Q9C0E8	428 aa		13.75	□□□□□ -0.21
TP53-224	ENST00000619186	ACE	P12821	1306 aa		13.75	□□□□□ -0.21
TP53-224	ENST00000619186	KIF16B	Q96L93	1317 aa		13.75	□□□□□ -0.21
TP53-224	ENST00000619186	SOX12	O15370	315 aa		13.75	□□□□□ -0.21
TP53-224	ENST00000619186	ALDH1L2	Q3SY69	923 aa		13.75	□□□□□ -0.21
TP53-224	ENST00000619186	SPRYD3	Q8NCJ5	442 aa		13.75	□□□□□ -0.21
TP53-224	ENST00000619186	PNN	Q9H307	717 aa	Known RBP	13.75	□□□□□ -0.21
TP53-224	ENST00000619186	SETD1B	Q9UPS6	1966 aa	Known RBP	13.74	□□□□□ -0.21
TP53-224	ENST00000619186	MFAP1	P55081	439 aa	Known RBP	13.74	□□□□□ -0.21
TP53-224	ENST00000619186	AKAP12	Q02952	1782 aa		13.74	□□□□□ -0.21
TP53-224	ENST00000619186	ZBTB7B	O15156	539 aa	Predicted RBP	13.74	□□□□□ -0.21
TP53-224	ENST00000619186	SIRT2	Q8IXJ6	389 aa		13.74	□□□□□ -0.21
TP53-224	ENST00000619186	AATK	Q6ZMQ8	1374 aa		13.74	□□□□□ -0.21
TP53-224	ENST00000619186	EIF4A2	Q14240	407 aa	Known RBP	13.73	□□□□□ -0.21
TP53-224	ENST00000619186	GSE1	Q14687	1217 aa		13.73	□□□□□ -0.21
TP53-224	ENST00000619186	ANTXR1	Q9H6X2	564 aa		13.73	□□□□□ -0.21
TP53-224	ENST00000619186	CCDC9	Q9Y3X0	531 aa	Known RBP	13.73	□□□□□ -0.21
TP53-224	ENST00000619186	IPO8	O15397	1037 aa	Known RBP	13.72	□□□□□ -0.21
TP53-224	ENST00000619186	TWISTNB	Q3B726	338 aa	Predicted RBP	13.72	□□□□□ -0.21
TP53-224	ENST00000619186	IFT57	Q9NWB7	429 aa		13.72	□□□□□ -0.21
TP53-224	ENST00000619186	XRN1	Q8IZH2	1706 aa	Known RBP	13.72	□□□□□ -0.21
TP53-224	ENST00000619186	HSP90B1	P14625	803 aa	Known RBP	13.71	□□□□□ -0.21
TP53-224	ENST00000619186	NUCB1	Q02818	461 aa		13.71	□□□□□ -0.21
TP53-224	ENST00000619186	HSP90AB2P	Q58FF8	381 aa		13.71	□□□□□ -0.21
TP53-224	ENST00000619186	ITSN1	Q15811	1721 aa		13.71	□□□□□ -0.21
TP53-224	ENST00000619186	ZNF142	P52746	1687 aa	Predicted RBP	13.71	□□□□□ -0.21
TP53-224	ENST00000619186	SULT6B1	Q6IMI4	303 aa		13.71	□□□□□ -0.21
TP53-224	ENST00000619186	TTC21B	Q7Z4L5	1316 aa		13.7	□□□□□ -0.22
TP53-224	ENST00000619186	PEAK1	Q9H792	1746 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms