RNA–Protein interactions for RNA: ENST00000616704.4

ELK4-204, Transcript of ELK4, ETS transcription factor, human

TSL 2

Gene ELK4, Length 2,535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ELK4-204	ENST00000616704	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	31.52	■■■□□ 2.64
ELK4-204	ENST00000616704	PLEKHG1	Q9ULL1	1385 aa		31.52	■■■□□ 2.64
ELK4-204	ENST00000616704	IL16	Q14005	1332 aa		31.52	■■■□□ 2.64
ELK4-204	ENST00000616704	NUCB1	Q02818	461 aa		31.52	■■■□□ 2.64
ELK4-204	ENST00000616704	EID1	Q9Y6B2	187 aa		31.51	■■■□□ 2.64
ELK4-204	ENST00000616704	LNPK	Q9C0E8	428 aa		31.51	■■■□□ 2.63
ELK4-204	ENST00000616704	KIF16B	Q96L93	1317 aa		31.51	■■■□□ 2.63
ELK4-204	ENST00000616704	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	31.5	■■■□□ 2.63
ELK4-204	ENST00000616704	COL3A1	P02461	1466 aa	Predicted RBP	31.5	■■■□□ 2.63
ELK4-204	ENST00000616704	RIPK4	P57078	832 aa		31.5	■■■□□ 2.63
ELK4-204	ENST00000616704	CLCN1	P35523	988 aa		31.49	■■■□□ 2.63
ELK4-204	ENST00000616704	SNX21	Q969T3	373 aa		31.49	■■■□□ 2.63
ELK4-204	ENST00000616704	TECPR2	O15040	1411 aa		31.49	■■■□□ 2.63
ELK4-204	ENST00000616704	KNDC1	Q76NI1	1749 aa		31.49	■■■□□ 2.63
ELK4-204	ENST00000616704	IPO8	O15397	1037 aa	Known RBP	31.48	■■■□□ 2.63
ELK4-204	ENST00000616704	GRPEL1	Q9HAV7	217 aa		31.48	■■■□□ 2.63
ELK4-204	ENST00000616704	PNN	Q9H307	717 aa	Known RBP	31.47	■■■□□ 2.63
ELK4-204	ENST00000616704	CPS1	P31327	1500 aa		31.46	■■■□□ 2.63
ELK4-204	ENST00000616704	FAM135B	Q49AJ0	1406 aa		31.46	■■■□□ 2.63
ELK4-204	ENST00000616704	CHD1L	Q86WJ1	897 aa		31.46	■■■□□ 2.63
ELK4-204	ENST00000616704	DNAJC5	Q9H3Z4	198 aa		31.45	■■■□□ 2.63
ELK4-204	ENST00000616704	TNPO1	Q92973	898 aa	Known RBP	31.44	■■■□□ 2.62
ELK4-204	ENST00000616704	NUDT16	Q96DE0	195 aa	Known RBP	31.44	■■■□□ 2.62
ELK4-204	ENST00000616704	PPIP5K1	Q6PFW1	1433 aa		31.44	■■■□□ 2.62
ELK4-204	ENST00000616704	PTPRU	Q92729	1446 aa		31.44	■■■□□ 2.62
ELK4-204	ENST00000616704	NUTM2F	A1L443	756 aa		31.44	■■■□□ 2.62
ELK4-204	ENST00000616704	THEMIS	Q8N1K5	641 aa	Predicted RBP	31.44	■■■□□ 2.62
ELK4-204	ENST00000616704	RIMS1	Q86UR5	1692 aa	Known RBP	31.44	■■■□□ 2.62
ELK4-204	ENST00000616704	SLIT1	O75093	1534 aa		31.43	■■■□□ 2.62
ELK4-204	ENST00000616704	FBLN1	P23142	703 aa		31.43	■■■□□ 2.62
ELK4-204	ENST00000616704	HSP90AB1	P08238	724 aa	Known RBP	31.43	■■■□□ 2.62
ELK4-204	ENST00000616704	ARHGAP23	Q9P227	1491 aa		31.43	■■■□□ 2.62
ELK4-204	ENST00000616704	SIRT1	Q96EB6	747 aa		31.42	■■■□□ 2.62
ELK4-204	ENST00000616704	NAP1L5	Q96NT1	182 aa	Predicted RBP	31.42	■■■□□ 2.62
ELK4-204	ENST00000616704	ALDH1L2	Q3SY69	923 aa		31.41	■■■□□ 2.62
ELK4-204	ENST00000616704	ISY1	Q9ULR0	285 aa	Known RBP	31.41	■■■□□ 2.62
ELK4-204	ENST00000616704	MED14	O60244	1454 aa		31.4	■■■□□ 2.62
ELK4-204	ENST00000616704	BMP2KL	Q5H9B9	411 aa		31.4	■■■□□ 2.62
ELK4-204	ENST00000616704	CIZ1	Q9ULV3	898 aa	Predicted RBP	31.4	■■■□□ 2.62
ELK4-204	ENST00000616704	PRR36	Q9H6K5	1346 aa		31.39	■■■□□ 2.62
ELK4-204	ENST00000616704	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	31.39	■■■□□ 2.62
ELK4-204	ENST00000616704	AMOTL2	Q9Y2J4	779 aa		31.38	■■■□□ 2.61
ELK4-204	ENST00000616704	ATP7B	P35670	1465 aa		31.38	■■■□□ 2.61
ELK4-204	ENST00000616704	DIAPH1	O60610	1272 aa	Known RBP	31.38	■■■□□ 2.61
ELK4-204	ENST00000616704	KIF2C	Q99661	725 aa		31.38	■■■□□ 2.61
ELK4-204	ENST00000616704	ANKRD26	Q9UPS8	1709 aa		31.37	■■■□□ 2.61
ELK4-204	ENST00000616704	RAB3GAP1	Q15042	981 aa		31.37	■■■□□ 2.61
ELK4-204	ENST00000616704	GBP4	Q96PP9	640 aa		31.37	■■■□□ 2.61
ELK4-204	ENST00000616704	KIF20B	Q96Q89	1820 aa		31.37	■■■□□ 2.61
ELK4-204	ENST00000616704	CCDC61	Q9Y6R9	512 aa		31.36	■■■□□ 2.61
ELK4-204	ENST00000616704	ANKRD45	Q5TZF3	282 aa		31.35	■■■□□ 2.61
ELK4-204	ENST00000616704	ZRANB1	Q9UGI0	708 aa		31.35	■■■□□ 2.61
ELK4-204	ENST00000616704	CD2BP2	O95400	341 aa	Known RBP	31.34	■■■□□ 2.61
ELK4-204	ENST00000616704	CPSF1	Q10570	1443 aa	Known RBP	31.34	■■■□□ 2.61
ELK4-204	ENST00000616704	GAS2L3	Q86XJ1	694 aa		31.33	■■■□□ 2.61
ELK4-204	ENST00000616704	NME9	Q86XW9	330 aa		31.33	■■■□□ 2.61
ELK4-204	ENST00000616704	FOXD4L1	Q9NU39	408 aa		31.32	■■■□□ 2.6
ELK4-204	ENST00000616704	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	31.32	■■■□□ 2.6
ELK4-204	ENST00000616704	HSP90AA1	P07900	732 aa	Known RBP	31.32	■■■□□ 2.6
ELK4-204	ENST00000616704	TBX22	Q9Y458	520 aa		31.32	■■■□□ 2.6
ELK4-204	ENST00000616704	C1orf115	Q9H7X2	142 aa		31.31	■■■□□ 2.6
ELK4-204	ENST00000616704	ESPN	B1AK53	854 aa		31.31	■■■□□ 2.6
ELK4-204	ENST00000616704	ZBTB7B	O15156	539 aa	Predicted RBP	31.31	■■■□□ 2.6
ELK4-204	ENST00000616704	GCC1	Q96CN9	775 aa		31.3	■■■□□ 2.6
ELK4-204	ENST00000616704	PNPLA6	Q8IY17	1366 aa		31.3	■■■□□ 2.6
ELK4-204	ENST00000616704	ERBB4	Q15303	1308 aa		31.3	■■■□□ 2.6
ELK4-204	ENST00000616704	TBC1D9	Q6ZT07	1266 aa		31.29	■■■□□ 2.6
ELK4-204	ENST00000616704	BRPF1	P55201	1214 aa	Predicted RBP	31.29	■■■□□ 2.6
ELK4-204	ENST00000616704	SKOR2	Q2VWA4	1001 aa	Predicted RBP	31.28	■■■□□ 2.6
ELK4-204	ENST00000616704		K7ELQ4	463 aa	Predicted RBP	31.28	■■■□□ 2.6
ELK4-204	ENST00000616704	FCHSD2	O94868	740 aa		31.27	■■■□□ 2.6
ELK4-204	ENST00000616704	ZNF428	Q96B54	188 aa		31.27	■■■□□ 2.6
ELK4-204	ENST00000616704	RBM42	Q9BTD8	480 aa	Known RBP	31.27	■■■□□ 2.6
ELK4-204	ENST00000616704	CDC42BPG	Q6DT37	1551 aa		31.26	■■■□□ 2.6
ELK4-204	ENST00000616704	PRKAR2B	P31323	418 aa		31.26	■■■□□ 2.59
ELK4-204	ENST00000616704	EDC4	Q6P2E9	1401 aa	Known RBP	31.26	■■■□□ 2.59
ELK4-204	ENST00000616704	LRRC7	Q96NW7	1537 aa		31.25	■■■□□ 2.59
ELK4-204	ENST00000616704	MRPL50	Q8N5N7	158 aa	Known RBP	31.24	■■■□□ 2.59
ELK4-204	ENST00000616704	PTMS	P20962	102 aa		31.24	■■■□□ 2.59
ELK4-204	ENST00000616704	TRIM44	Q96DX7	344 aa	Predicted RBP	31.24	■■■□□ 2.59
ELK4-204	ENST00000616704	VAMP4	O75379	141 aa		31.23	■■■□□ 2.59
ELK4-204	ENST00000616704	POLK	Q9UBT6	870 aa		31.23	■■■□□ 2.59
ELK4-204	ENST00000616704	ADAMTSL3	P82987	1691 aa		31.22	■■■□□ 2.59
ELK4-204	ENST00000616704	SIRT2	Q8IXJ6	389 aa		31.22	■■■□□ 2.59
ELK4-204	ENST00000616704	CHMP4B	Q9H444	224 aa	Known RBP	31.22	■■■□□ 2.59
ELK4-204	ENST00000616704	THUMPD2	Q9BTF0	503 aa	Known RBP	31.22	■■■□□ 2.59
ELK4-204	ENST00000616704	PIK3R4	Q99570	1358 aa		31.21	■■■□□ 2.59
ELK4-204	ENST00000616704	KCNA6	P17658	529 aa		31.21	■■■□□ 2.59
ELK4-204	ENST00000616704	MAP2	P11137	1827 aa	Known RBP	31.21	■■■□□ 2.59
ELK4-204	ENST00000616704	SSFA2	P28290	1259 aa		31.21	■■■□□ 2.59
ELK4-204	ENST00000616704	TSPYL6	Q8N831	410 aa		31.21	■■■□□ 2.59
ELK4-204	ENST00000616704	GAS2L2	Q8NHY3	880 aa		31.21	■■■□□ 2.59
ELK4-204	ENST00000616704	ARHGAP45	Q92619	1136 aa		31.21	■■■□□ 2.59
ELK4-204	ENST00000616704	ITSN1	Q15811	1721 aa		31.2	■■■□□ 2.59
ELK4-204	ENST00000616704	MON2	Q7Z3U7	1717 aa		31.2	■■■□□ 2.59
ELK4-204	ENST00000616704	PTCH1	Q13635	1447 aa		31.2	■■■□□ 2.59
ELK4-204	ENST00000616704	EMILIN1	Q9Y6C2	1016 aa		31.2	■■■□□ 2.58
ELK4-204	ENST00000616704	ACE	P12821	1306 aa		31.19	■■■□□ 2.58
ELK4-204	ENST00000616704	AKAP12	Q02952	1782 aa		31.19	■■■□□ 2.58
ELK4-204	ENST00000616704	PHACTR3	Q96KR7	559 aa		31.18	■■■□□ 2.58

Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms