RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 C22orf23Q9BZE7 217 aa17.97■□□□□ 0.47
SYMPK-213ENST00000599460 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.97■□□□□ 0.47
SYMPK-213ENST00000599460 ERC1Q8IUD2 1116 aa17.97■□□□□ 0.47
SYMPK-213ENST00000599460 ABCA8O94911 1581 aa17.96■□□□□ 0.47
SYMPK-213ENST00000599460 TAF7Q15545 349 aaPredicted RBP17.96■□□□□ 0.47
SYMPK-213ENST00000599460 KLHL34Q8N239 644 aa17.96■□□□□ 0.47
SYMPK-213ENST00000599460 AKAP17AQ02040 695 aaKnown RBP17.96■□□□□ 0.47
SYMPK-213ENST00000599460 TRDNQ13061 729 aa17.96■□□□□ 0.47
SYMPK-213ENST00000599460 FSD1Q9BTV5 496 aa17.96■□□□□ 0.47
SYMPK-213ENST00000599460 FYB1O15117 783 aa17.96■□□□□ 0.46
SYMPK-213ENST00000599460 MPRIPQ6WCQ1 1025 aa17.95■□□□□ 0.46
SYMPK-213ENST00000599460 RASSF8Q8NHQ8 419 aa17.95■□□□□ 0.46
SYMPK-213ENST00000599460 ARHGEF12Q9NZN5 1544 aa17.95■□□□□ 0.46
SYMPK-213ENST00000599460 MSH6P52701 1360 aa17.95■□□□□ 0.46
SYMPK-213ENST00000599460 CLSTN1O94985 981 aa17.95■□□□□ 0.46
SYMPK-213ENST00000599460 SF3A1Q15459 793 aaKnown RBP17.95■□□□□ 0.46
SYMPK-213ENST00000599460 TRIM34Q9BYJ4 488 aa17.95■□□□□ 0.46
SYMPK-213ENST00000599460 FOXD4L6Q3SYB3 417 aaPredicted RBP17.94■□□□□ 0.46
SYMPK-213ENST00000599460 FOXD4L3Q6VB84 417 aaPredicted RBP17.94■□□□□ 0.46
SYMPK-213ENST00000599460 DNAJC2Q99543 621 aaKnown RBP17.94■□□□□ 0.46
SYMPK-213ENST00000599460 CHD1O14646 1710 aa17.94■□□□□ 0.46
SYMPK-213ENST00000599460 ASXL1Q8IXJ9 1541 aa17.94■□□□□ 0.46
SYMPK-213ENST00000599460 SIL1Q9H173 461 aa17.94■□□□□ 0.46
SYMPK-213ENST00000599460 CCDC34Q96HJ3 373 aa17.94■□□□□ 0.46
SYMPK-213ENST00000599460 CNNM1Q9NRU3 951 aa17.93■□□□□ 0.46
SYMPK-213ENST00000599460 NEO1Q92859 1461 aa17.93■□□□□ 0.46
SYMPK-213ENST00000599460 TMEM57Q8N5G2 664 aa17.93■□□□□ 0.46
SYMPK-213ENST00000599460 FANCIQ9NVI1 1328 aa17.93■□□□□ 0.46
SYMPK-213ENST00000599460 TTC21AQ8NDW8 1320 aa17.93■□□□□ 0.46
SYMPK-213ENST00000599460 CCDC27Q2M243 656 aa17.93■□□□□ 0.46
SYMPK-213ENST00000599460 TESK2Q96S53 571 aa17.93■□□□□ 0.46
SYMPK-213ENST00000599460 TMOD3Q9NYL9 352 aa17.93■□□□□ 0.46
SYMPK-213ENST00000599460 AMER1Q5JTC6 1135 aaPredicted RBP17.93■□□□□ 0.46
SYMPK-213ENST00000599460 CPLX2Q6PUV4 134 aaKnown RBP17.92■□□□□ 0.46
SYMPK-213ENST00000599460 LRRCC1Q9C099 1032 aa17.92■□□□□ 0.46
SYMPK-213ENST00000599460 RTN4Q9NQC3 1192 aaKnown RBP17.92■□□□□ 0.46
SYMPK-213ENST00000599460 PTCD1O75127 700 aaKnown RBP17.92■□□□□ 0.46
SYMPK-213ENST00000599460 NCKAP5LQ9HCH0 1330 aa17.92■□□□□ 0.46
SYMPK-213ENST00000599460 RARSP54136 660 aaKnown RBP17.92■□□□□ 0.46
SYMPK-213ENST00000599460 SSH1Q8WYL5 1049 aa17.92■□□□□ 0.46
SYMPK-213ENST00000599460 MYO5CQ9NQX4 1742 aa17.92■□□□□ 0.46
SYMPK-213ENST00000599460 NKTRP30414 1462 aaKnown RBP17.92■□□□□ 0.46
SYMPK-213ENST00000599460 DDX11L8A8MPP1 907 aa17.92■□□□□ 0.46
SYMPK-213ENST00000599460 RAD21O60216 631 aa17.91■□□□□ 0.46
SYMPK-213ENST00000599460 MCTP1Q6DN14 999 aa17.91■□□□□ 0.46
SYMPK-213ENST00000599460 ATP6V1DQ9Y5K8 247 aa17.91■□□□□ 0.46
SYMPK-213ENST00000599460 CPLX1O14810 134 aa17.9■□□□□ 0.46
SYMPK-213ENST00000599460 MSNP26038 577 aaKnown RBP17.9■□□□□ 0.46
SYMPK-213ENST00000599460 ANKRD24Q8TF21 1146 aa17.9■□□□□ 0.46
SYMPK-213ENST00000599460 STARD3NLO95772 234 aa17.9■□□□□ 0.46
SYMPK-213ENST00000599460 ALDH1L2Q3SY69 923 aa17.9■□□□□ 0.46
SYMPK-213ENST00000599460 SRGAP3O43295 1099 aa17.9■□□□□ 0.46
SYMPK-213ENST00000599460 NFXL1Q6ZNB6 911 aa17.9■□□□□ 0.46
SYMPK-213ENST00000599460 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.9■□□□□ 0.46
SYMPK-213ENST00000599460 MARCH6O60337 910 aa17.89■□□□□ 0.46
SYMPK-213ENST00000599460 CHRNA2Q15822 529 aa17.89■□□□□ 0.46
SYMPK-213ENST00000599460 GOLGA6L3A6NEY3 463 aa17.89■□□□□ 0.45
SYMPK-213ENST00000599460 HSPA2P54652 639 aa17.89■□□□□ 0.45
SYMPK-213ENST00000599460 YTHDC2Q9H6S0 1430 aaKnown RBP17.89■□□□□ 0.45
SYMPK-213ENST00000599460 ADGBQ8N7X0 1667 aa17.89■□□□□ 0.45
SYMPK-213ENST00000599460 HSP90AB2PQ58FF8 381 aa17.89■□□□□ 0.45
SYMPK-213ENST00000599460 TBC1D2BQ9UPU7 963 aa17.89■□□□□ 0.45
SYMPK-213ENST00000599460 VPS53Q5VIR6 699 aa17.89■□□□□ 0.45
SYMPK-213ENST00000599460 ARHGEF5Q12774 1597 aa17.88■□□□□ 0.45
SYMPK-213ENST00000599460 ERICH2A1L162 156 aa17.88■□□□□ 0.45
SYMPK-213ENST00000599460 TTC39AQ5SRH9 613 aa17.88■□□□□ 0.45
SYMPK-213ENST00000599460 ABCC1P33527 1531 aa17.88■□□□□ 0.45
SYMPK-213ENST00000599460 CCDC158Q5M9N0 1113 aa17.88■□□□□ 0.45
SYMPK-213ENST00000599460 CCDC57Q2TAC2 916 aa17.88■□□□□ 0.45
SYMPK-213ENST00000599460 ZRANB1Q9UGI0 708 aa17.88■□□□□ 0.45
SYMPK-213ENST00000599460 TPM4P67936 248 aa17.87■□□□□ 0.45
SYMPK-213ENST00000599460 ZFYVE16Q7Z3T8 1539 aa17.87■□□□□ 0.45
SYMPK-213ENST00000599460 FAM83GA6ND36 823 aa17.87■□□□□ 0.45
SYMPK-213ENST00000599460 CFAP74Q9C0B2 1584 aa17.87■□□□□ 0.45
SYMPK-213ENST00000599460 TRIM29Q14134 588 aa17.87■□□□□ 0.45
SYMPK-213ENST00000599460 RALYLQ86SE5 291 aaKnown RBP17.87■□□□□ 0.45
SYMPK-213ENST00000599460 CHD1LQ86WJ1 897 aa17.87■□□□□ 0.45
SYMPK-213ENST00000599460 PUS7Q96PZ0 661 aaKnown RBP17.87■□□□□ 0.45
SYMPK-213ENST00000599460 KCNA6P17658 529 aa17.87■□□□□ 0.45
SYMPK-213ENST00000599460 SF3B2Q13435 895 aaKnown RBP17.87■□□□□ 0.45
SYMPK-213ENST00000599460 NGLY1Q96IV0 654 aa17.86■□□□□ 0.45
SYMPK-213ENST00000599460 RPAP2Q8IXW5 612 aaPredicted RBP17.86■□□□□ 0.45
SYMPK-213ENST00000599460 NPHP3Q7Z494 1330 aa17.86■□□□□ 0.45
SYMPK-213ENST00000599460 PHF14O94880 888 aa17.85■□□□□ 0.45
SYMPK-213ENST00000599460 HIP1O00291 1037 aa17.85■□□□□ 0.45
SYMPK-213ENST00000599460 DDX49Q9Y6V7 483 aaKnown RBP17.85■□□□□ 0.45
SYMPK-213ENST00000599460 C20orf194Q5TEA3 1177 aa17.85■□□□□ 0.45
SYMPK-213ENST00000599460 NAP1L5Q96NT1 182 aaPredicted RBP17.85■□□□□ 0.45
SYMPK-213ENST00000599460 TBX22Q9Y458 520 aa17.85■□□□□ 0.45
SYMPK-213ENST00000599460 SMC3Q9UQE7 1217 aa17.84■□□□□ 0.45
SYMPK-213ENST00000599460 EXOC5O00471 708 aa17.84■□□□□ 0.45
SYMPK-213ENST00000599460 IFNL2Q8IZJ0 200 aa17.84■□□□□ 0.45
SYMPK-213ENST00000599460 MAP4K4O95819 1239 aaPredicted RBP17.84■□□□□ 0.45
SYMPK-213ENST00000599460 BICDL1Q6ZP65 573 aa17.84■□□□□ 0.45
SYMPK-213ENST00000599460 MPHOSPH8Q99549 860 aa17.84■□□□□ 0.45
SYMPK-213ENST00000599460 C19orf44Q9H6X5 657 aa17.84■□□□□ 0.45
SYMPK-213ENST00000599460 DHX16O60231 1041 aaKnown RBP17.83■□□□□ 0.45
SYMPK-213ENST00000599460 AACSQ86V21 672 aa17.83■□□□□ 0.45
SYMPK-213ENST00000599460 MBD5Q9P267 1494 aa17.83■□□□□ 0.45
SYMPK-213ENST00000599460 UHRF1BP1Q6BDS2 1440 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms