RNA–Protein interactions for RNA: ENST00000587427.5

GHDC-207, Transcript of GH3 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GHDC, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-207ENST00000587427 MTHFSP49914 203 aa20.15■□□□□ 0.82
GHDC-207ENST00000587427 FAM135BQ49AJ0 1406 aa20.15■□□□□ 0.82
GHDC-207ENST00000587427 MRE11P49959 708 aa20.15■□□□□ 0.82
GHDC-207ENST00000587427 NALCNQ8IZF0 1738 aa20.15■□□□□ 0.82
GHDC-207ENST00000587427 FTSJ3Q8IY81 847 aaKnown RBP20.14■□□□□ 0.82
GHDC-207ENST00000587427 SLC12A5Q9H2X9 1139 aa20.14■□□□□ 0.81
GHDC-207ENST00000587427 QRICH2Q9H0J4 1663 aa20.13■□□□□ 0.81
GHDC-207ENST00000587427 ISY1Q9ULR0 285 aaKnown RBP20.13■□□□□ 0.81
GHDC-207ENST00000587427 DDX11L8A8MPP1 907 aa20.13■□□□□ 0.81
GHDC-207ENST00000587427 ZNF692Q9BU19 519 aaPredicted RBP20.13■□□□□ 0.81
GHDC-207ENST00000587427 ADGRB2O60241 1585 aa20.12■□□□□ 0.81
GHDC-207ENST00000587427 NCOA3Q9Y6Q9 1424 aa20.12■□□□□ 0.81
GHDC-207ENST00000587427 HSCBQ8IWL3 235 aa20.12■□□□□ 0.81
GHDC-207ENST00000587427 SIRT1Q96EB6 747 aa20.12■□□□□ 0.81
GHDC-207ENST00000587427 NSD2O96028 1365 aa20.1■□□□□ 0.81
GHDC-207ENST00000587427 DDIT3P35638 169 aa20.1■□□□□ 0.81
GHDC-207ENST00000587427 SMC5Q8IY18 1101 aa20.1■□□□□ 0.81
GHDC-207ENST00000587427 CERKQ8TCT0 537 aa20.1■□□□□ 0.81
GHDC-207ENST00000587427 DDX19BQ9UMR2 479 aa20.1■□□□□ 0.81
GHDC-207ENST00000587427 ADGRL3Q9HAR2 1447 aa20.1■□□□□ 0.81
GHDC-207ENST00000587427 C19orf44Q9H6X5 657 aa20.09■□□□□ 0.81
GHDC-207ENST00000587427 CABP2Q9NPB3 220 aa20.09■□□□□ 0.81
GHDC-207ENST00000587427 GRPEL1Q9HAV7 217 aa20.08■□□□□ 0.81
GHDC-207ENST00000587427 TRIM27P14373 513 aa20.08■□□□□ 0.8
GHDC-207ENST00000587427 SNX21Q969T3 373 aa20.08■□□□□ 0.8
GHDC-207ENST00000587427 PUS7Q96PZ0 661 aaKnown RBP20.08■□□□□ 0.8
GHDC-207ENST00000587427 SMC4Q9NTJ3 1288 aa20.08■□□□□ 0.8
GHDC-207ENST00000587427 MSH6P52701 1360 aa20.08■□□□□ 0.8
GHDC-207ENST00000587427 U2AF1L5P0DN76 240 aaPredicted RBP20.07■□□□□ 0.8
GHDC-207ENST00000587427 RBM25P49756 843 aaKnown RBP20.07■□□□□ 0.8
GHDC-207ENST00000587427 U2AF1Q01081 240 aaKnown RBP eCLIP20.07■□□□□ 0.8
GHDC-207ENST00000587427 CDK19Q9BWU1 502 aa20.07■□□□□ 0.8
GHDC-207ENST00000587427 TULP4Q9NRJ4 1543 aa20.07■□□□□ 0.8
GHDC-207ENST00000587427 HSP90AA1P07900 732 aaKnown RBP20.06■□□□□ 0.8
GHDC-207ENST00000587427 WASLO00401 505 aaPredicted RBP20.06■□□□□ 0.8
GHDC-207ENST00000587427 SRPK2P78362 688 aaKnown RBP20.06■□□□□ 0.8
GHDC-207ENST00000587427 ATF7IPQ6VMQ6 1270 aa20.06■□□□□ 0.8
GHDC-207ENST00000587427 ERBB4Q15303 1308 aa20.05■□□□□ 0.8
GHDC-207ENST00000587427 ATF3P18847 181 aa20.05■□□□□ 0.8
GHDC-207ENST00000587427 HSP90AA2PQ14568 343 aaPredicted RBP20.05■□□□□ 0.8
GHDC-207ENST00000587427 CIZ1Q9ULV3 898 aaPredicted RBP20.05■□□□□ 0.8
GHDC-207ENST00000587427 EXOSC9Q06265 439 aaKnown RBP20.04■□□□□ 0.8
GHDC-207ENST00000587427 ITPRIPQ8IWB1 547 aa20.04■□□□□ 0.8
GHDC-207ENST00000587427 TSR2Q969E8 191 aaKnown RBP20.04■□□□□ 0.8
GHDC-207ENST00000587427 PRR36Q9H6K5 1346 aa20.04■□□□□ 0.8
GHDC-207ENST00000587427 ANKRD36BQ8N2N9 1353 aa20.04■□□□□ 0.8
GHDC-207ENST00000587427 GLIPR1L2Q4G1C9 344 aa20.03■□□□□ 0.8
GHDC-207ENST00000587427 SSH1Q8WYL5 1049 aa20.03■□□□□ 0.8
GHDC-207ENST00000587427 ESPNB1AK53 854 aa20.03■□□□□ 0.8
GHDC-207ENST00000587427 IL16Q14005 1332 aa20.03■□□□□ 0.8
GHDC-207ENST00000587427 ZBTB40Q9NUA8 1239 aa20.02■□□□□ 0.8
GHDC-207ENST00000587427 PIP4K2BP78356 416 aa20.02■□□□□ 0.8
GHDC-207ENST00000587427 ORAI2Q96SN7 254 aa20.02■□□□□ 0.8
GHDC-207ENST00000587427 NUCB1Q02818 461 aa20.01■□□□□ 0.79
GHDC-207ENST00000587427 GAS2L3Q86XJ1 694 aa20.01■□□□□ 0.79
GHDC-207ENST00000587427 VSIG10Q8N0Z9 540 aa20.01■□□□□ 0.79
GHDC-207ENST00000587427 PLEKHF1Q96S99 279 aa20.01■□□□□ 0.79
GHDC-207ENST00000587427 EVC2Q86UK5 1308 aa20.01■□□□□ 0.79
GHDC-207ENST00000587427 UBAP1LF5GYI3 381 aa20■□□□□ 0.79
GHDC-207ENST00000587427 RGPD8O14715 1765 aaPredicted RBP20■□□□□ 0.79
GHDC-207ENST00000587427 TMPOP42166 694 aaKnown RBP20■□□□□ 0.79
GHDC-207ENST00000587427 CADPS2Q86UW7 1296 aa20■□□□□ 0.79
GHDC-207ENST00000587427 DDX17Q92841 729 aaKnown RBP20■□□□□ 0.79
GHDC-207ENST00000587427 TNPO1Q92973 898 aaKnown RBP20■□□□□ 0.79
GHDC-207ENST00000587427 NOB1Q9ULX3 412 aaKnown RBP20■□□□□ 0.79
GHDC-207ENST00000587427 TRIM35Q9UPQ4 493 aa20■□□□□ 0.79
GHDC-207ENST00000587427 PTMSP20962 102 aa19.99■□□□□ 0.79
GHDC-207ENST00000587427 SLAIN2Q9P270 581 aa19.99■□□□□ 0.79
GHDC-207ENST00000587427 CDC42BPGQ6DT37 1551 aa19.99■□□□□ 0.79
GHDC-207ENST00000587427 RRP9O43818 475 aaKnown RBP19.99■□□□□ 0.79
GHDC-207ENST00000587427 MST1RQ04912 1400 aa19.99■□□□□ 0.79
GHDC-207ENST00000587427 TMEM57Q8N5G2 664 aa19.99■□□□□ 0.79
GHDC-207ENST00000587427 NUDT16Q96DE0 195 aaKnown RBP19.99■□□□□ 0.79
GHDC-207ENST00000587427 PKNOX2Q96KN3 472 aa19.99■□□□□ 0.79
GHDC-207ENST00000587427 GBP4Q96PP9 640 aa19.99■□□□□ 0.79
GHDC-207ENST00000587427 KIF16BQ96L93 1317 aa19.98■□□□□ 0.79
GHDC-207ENST00000587427 SKOR2Q2VWA4 1001 aaPredicted RBP19.98■□□□□ 0.79
GHDC-207ENST00000587427 ESCO1Q5FWF5 840 aa19.98■□□□□ 0.79
GHDC-207ENST00000587427 IPO8O15397 1037 aaKnown RBP19.98■□□□□ 0.79
GHDC-207ENST00000587427 RAB3GAP1Q15042 981 aa19.98■□□□□ 0.79
GHDC-207ENST00000587427 FMN2Q9NZ56 1722 aa19.97■□□□□ 0.79
GHDC-207ENST00000587427 ZMYND15Q9H091 742 aa19.96■□□□□ 0.79
GHDC-207ENST00000587427 ATP7BP35670 1465 aa19.96■□□□□ 0.79
GHDC-207ENST00000587427 C1orf167Q5SNV9 1468 aa19.96■□□□□ 0.79
GHDC-207ENST00000587427 BMP2KLQ5H9B9 411 aa19.95■□□□□ 0.78
GHDC-207ENST00000587427 TRIM44Q96DX7 344 aaPredicted RBP19.95■□□□□ 0.78
GHDC-207ENST00000587427 COL3A1P02461 1466 aaPredicted RBP19.95■□□□□ 0.78
GHDC-207ENST00000587427 HSP90AB1P08238 724 aaKnown RBP19.95■□□□□ 0.78
GHDC-207ENST00000587427 CHD1LQ86WJ1 897 aa19.95■□□□□ 0.78
GHDC-207ENST00000587427 CABP1Q9NZU7 370 aa19.95■□□□□ 0.78
GHDC-207ENST00000587427 DCCP43146 1447 aa19.95■□□□□ 0.78
GHDC-207ENST00000587427 XPCQ01831 940 aaPredicted RBP19.94■□□□□ 0.78
GHDC-207ENST00000587427 FOXD4L1Q9NU39 408 aa19.94■□□□□ 0.78
GHDC-207ENST00000587427 ALDH1L2Q3SY69 923 aa19.93■□□□□ 0.78
GHDC-207ENST00000587427 TOM1O60784 492 aa19.93■□□□□ 0.78
GHDC-207ENST00000587427 BRINP3Q76B58 766 aa19.93■□□□□ 0.78
GHDC-207ENST00000587427 KIF2CQ99661 725 aa19.93■□□□□ 0.78
GHDC-207ENST00000587427 LNPKQ9C0E8 428 aa19.92■□□□□ 0.78
GHDC-207ENST00000587427 U2SURPO15042 1029 aaKnown RBP19.92■□□□□ 0.78
GHDC-207ENST00000587427 FOXO3O43524 673 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms